-
2
-
-
34249337761
-
Introduction perceptions of epigenetics
-
A. Bird, "Introduction perceptions of epigenetics," Nature, vol. 447, no. 7143, pp. 396-398, 2007.
-
(2007)
Nature
, vol.447
, Issue.7143
, pp. 396-398
-
-
Bird, A.1
-
3
-
-
84939862352
-
Human cancer epigenetics
-
R. L. Jirltle and F. L. Tyson, Eds., Springer, Berlin, Germany
-
F. J. Carmona and M. Esteller, "Human cancer epigenetics," in Environmental Epigenomics and Diseases, R. L. Jirltle and F. L. Tyson, Eds., Springer, Berlin, Germany, 2013.
-
(2013)
Environmental Epigenomics and Diseases
-
-
Carmona, F.J.1
Esteller, M.2
-
4
-
-
84863534997
-
Metabolic regulation of epigenetics
-
C. Lu and C. B. Thompson, "Metabolic regulation of epigenetics," Cell Metabolism, vol. 16, no. 1, pp. 9-17, 2012.
-
(2012)
Cell Metabolism
, vol.16
, Issue.1
, pp. 9-17
-
-
Lu, C.1
Thompson, C.B.2
-
5
-
-
84939789832
-
Epigentics and metabolism
-
S. Katada, A. Imhof, and P. Sassone-Corsi, "Epigentics and metabolism," Cell, vol. 148, pp. 20-28, 2012.
-
(2012)
Cell
, vol.148
, pp. 20-28
-
-
Katada, S.1
Imhof, A.2
Sassone-Corsi, P.3
-
6
-
-
77954855829
-
Non-coding RNAs: Meet thy masters
-
F. F. Costa, "Non-coding RNAs: meet thy masters," BioEssays, vol. 32, no. 7, pp. 599-608, 2010.
-
(2010)
BioEssays
, vol.32
, Issue.7
, pp. 599-608
-
-
Costa, F.F.1
-
7
-
-
84885215226
-
Systematic classification of non-coding RNAs by epigenomic similarity
-
M. G. Dozmorov, C. B. Giles, K. A. Koelsch, and J. D. Wren, "Systematic classification of non-coding RNAs by epigenomic similarity," BMC Bioinformatics, vol. 14, supplement 14, article S2, 2013.
-
(2013)
BMC Bioinformatics
, vol.14
-
-
Dozmorov, M.G.1
Giles, C.B.2
Koelsch, K.A.3
Wren, J.D.4
-
8
-
-
34250651738
-
Small RNA regulators and the bacterial response to stress
-
S. Gottesman, C. A. McCullen, M. Guillier et al., "Small RNA regulators and the bacterial response to stress," Cold Spring Harbor Symposia on Quantitative Biology, vol. 71, pp. 1-11, 2006.
-
(2006)
Cold Spring Harbor Symposia on Quantitative Biology
, vol.71
, pp. 1-11
-
-
Gottesman, S.1
McCullen, C.A.2
Guillier, M.3
-
9
-
-
34447550259
-
The role of small RNAs in abiotic stress
-
J. R. Phillips, T. Dalmay, and D. Bartels, "The role of small RNAs in abiotic stress," FEBS Letters, vol. 581, no. 19, pp. 3592-3597, 2007.
-
(2007)
FEBS Letters
, vol.581
, Issue.19
, pp. 3592-3597
-
-
Phillips, J.R.1
Dalmay, T.2
Bartels, D.3
-
10
-
-
84858798657
-
Negative correlation between expression level and evolutionary rate of long intergenic noncoding RNAs
-
D. Managadze, I. B. Rogozin, D. Chernikova, S. A. Shabalina, and E. V. Koonin, "Negative correlation between expression level and evolutionary rate of long intergenic noncoding RNAs," Genome Biology and Evolution, vol. 3, no. 1, pp. 1390-1404, 2011.
-
(2011)
Genome Biology and Evolution
, vol.3
, Issue.1
, pp. 1390-1404
-
-
Managadze, D.1
Rogozin, I.B.2
Chernikova, D.3
Shabalina, S.A.4
Koonin, E.V.5
-
11
-
-
84902672358
-
Distinguishing between 'function' and 'effect' in genome biology
-
W. F. Doolittle, T. D. P. Brunet, S. Linquist, and T. R. Gregory, "Distinguishing between 'function' and 'effect' in genome biology," Genome Biology and Evolution, vol. 6, pp. 1234-1237, 2014.
-
(2014)
Genome Biology and Evolution
, vol.6
, pp. 1234-1237
-
-
Doolittle, W.F.1
Brunet, T.D.P.2
Linquist, S.3
Gregory, T.R.4
-
12
-
-
84901645644
-
Conceptual and empirical challenges of ascribing functions to transposable elements
-
T. A. Elliott, S. Linquist, and T. R. Gregory, "Conceptual and empirical challenges of ascribing functions to transposable elements," The American Naturalist, vol. 184, no. 1, pp. 14-24, 2014.
-
(2014)
The American Naturalist
, vol.184
, Issue.1
, pp. 14-24
-
-
Elliott, T.A.1
Linquist, S.2
Gregory, T.R.3
-
13
-
-
84865757142
-
Landscape of transcription in human cells
-
S. Djebali, C. A. Davis, A. Merkel et al., "Landscape of transcription in human cells," Nature, vol. 489, pp. 101-108, 2012.
-
(2012)
Nature
, vol.489
, pp. 101-108
-
-
Djebali, S.1
Davis, C.A.2
Merkel, A.3
-
14
-
-
84925281803
-
Development of cytotoxicity-sensitive human cells using over-expression of long non-coding RNAs
-
H. Tani and M. Torimura, "Development of cytotoxicity-sensitive human cells using over-expression of long non-coding RNAs," Journal of Bioscience and Bioengineering, vol. 119, no. 5, pp. 604-608, 2015.
-
(2015)
Journal of Bioscience and Bioengineering
, vol.119
, Issue.5
, pp. 604-608
-
-
Tani, H.1
Torimura, M.2
-
15
-
-
84875530540
-
LNCipedia: A database for annotated human IncRNA transcript sequences and structures
-
P.-J. Volders, K. Helsens, X. Wang et al., "LNCipedia: a database for annotated human IncRNA transcript sequences and structures," Nucleic Acids Research, vol. 41, no. 1, pp. D246-D251, 2013.
-
(2013)
Nucleic Acids Research
, vol.41
, Issue.1
, pp. D246-D251
-
-
Volders, P.-J.1
Helsens, K.2
Wang, X.3
-
16
-
-
84861904178
-
Genome regulation by long noncoding RNAs
-
J. L. Rinn and H. Y. Chang, "Genome regulation by long noncoding RNAs," Annual Review of Biochemistry, vol. 81, no. 1, pp. 145-166, 2012.
-
(2012)
Annual Review of Biochemistry
, vol.81
, Issue.1
, pp. 145-166
-
-
Rinn, J.L.1
Chang, H.Y.2
-
17
-
-
84897128298
-
The noncoding RNA revolution-trashing old rules to forge new ones
-
T. R. Cech and J. A. Steitz, "The noncoding RNA revolution-trashing old rules to forge new ones," Cell, vol. 157, no. 1, pp. 77-94, 2014.
-
(2014)
Cell
, vol.157
, Issue.1
, pp. 77-94
-
-
Cech, T.R.1
Steitz, J.A.2
-
18
-
-
33847187076
-
Non-coding RNAs: Lessons from the small nuclear and small nucleolar RNAs
-
A. G. Matera, R.M. Terns, and M. P. Terns, "Non-coding RNAs: lessons from the small nuclear and small nucleolar RNAs," Nature Reviews Molecular Cell Biology, vol. 8, no. 3, pp. 209-220, 2007.
-
(2007)
Nature Reviews Molecular Cell Biology
, vol.8
, Issue.3
, pp. 209-220
-
-
Matera, A.G.1
Terns, R.M.2
Terns, M.P.3
-
19
-
-
0028997105
-
Sm and Sm-like proteins belong to a large family: Identification of proteins of the U6 as well as the U1, U2, U4 and U5 snRNPs
-
B. Seraphin, "Sm and Sm-like proteins belong to a large family: identification of proteins of the U6 as well as the U1, U2, U4 and U5 snRNPs," The EMBO Journal, vol. 14, no. 9, pp. 2089-2098, 1995.
-
(1995)
The EMBO Journal
, vol.14
, Issue.9
, pp. 2089-2098
-
-
Seraphin, B.1
-
20
-
-
84860116635
-
Architecture of the spliceosome
-
C. van der Feltz, K. Anthony, A. Brilot, and D. A. Pomeranz Krummel, "Architecture of the spliceosome," Biochemistry, vol. 51, no. 16, pp. 3321-3333, 2012.
-
(2012)
Biochemistry
, vol.51
, Issue.16
, pp. 3321-3333
-
-
Van Der-Feltz, C.1
Anthony, K.2
Brilot, A.3
Pomeranz Krummel, D.A.4
-
21
-
-
84859583136
-
U7 small nuclear ribonucleoprotein represses histone gene transcription in cell cycle-arrested cells
-
T. Ideue, S. Adachi, T. Naganuma, A. Tanigawa, T. Natsume, and T. Hirose, "U7 small nuclear ribonucleoprotein represses histone gene transcription in cell cycle-arrested cells," Proceedings of the National Academy of Sciences of the United States of America, vol. 109, no. 15, pp. 5693-5698, 2012.
-
(2012)
Proceedings of the National Academy of Sciences of the United States of America
, vol.109
, Issue.15
, pp. 5693-5698
-
-
Ideue, T.1
Adachi, S.2
Naganuma, T.3
Tanigawa, A.4
Natsume, T.5
Hirose, T.6
-
22
-
-
0042124978
-
Identification of eight members of the argonaute family in the human genome
-
T. Sasaki, A. Shiohama, S. Minoshima, and N. Shimizu, "Identification of eight members of the Argonaute family in the human genome," Genomics, vol. 82, no. 3, pp. 323-330, 2003.
-
(2003)
Genomics
, vol.82
, Issue.3
, pp. 323-330
-
-
Sasaki, T.1
Shiohama, A.2
Minoshima, S.3
Shimizu, N.4
-
23
-
-
0037030522
-
Molecular characterization of hiwi, a human member of the piwi gene family whose overexpression is correlated to seminomas
-
D. Qiao, A.-M. Zeeman, W. Deng, L. H. J. Looijenga, and H. Lin, "Molecular characterization of hiwi, a human member of the piwi gene family whose overexpression is correlated to seminomas," Oncogene, vol. 21, no. 25, pp. 3988-3999, 2002.
-
(2002)
Oncogene
, vol.21
, Issue.25
, pp. 3988-3999
-
-
Qiao, D.1
Zeeman, A.-M.2
Deng, W.3
Looijenga, L.H.J.4
Lin, H.5
-
24
-
-
84879163348
-
Piwi-interacting RNAs: Biological functions and biogenesis
-
K. Sato and M. C. Siomi, "Piwi-interacting RNAs: Biological functions and biogenesis," Essays in Biochemistry, vol. 54, no. 1, pp. 39-52, 2013.
-
(2013)
Essays in Biochemistry
, vol.54
, Issue.1
, pp. 39-52
-
-
Sato, K.1
Siomi, M.C.2
-
25
-
-
79960029056
-
RNA-guided complex from a bacterial immune system enhances target recognition through seed sequence interactions
-
B. Wiedenheft, E. van Duijn, J. Bultema et al., "RNA-guided complex from a bacterial immune system enhances target recognition through seed sequence interactions," Proceedings of the National Academy of Sciences of the United States of America, vol. 108, no. 25, pp. 10092-10097, 2011.
-
(2011)
Proceedings of the National Academy of Sciences of the United States of America
, vol.108
, Issue.25
, pp. 10092-10097
-
-
Wiedenheft, B.1
Van Duijn, E.2
Bultema, J.3
-
26
-
-
79956052873
-
Role for piRNAs and noncoding RNA in de novo DNA methylation of the imprinted mouse rasgrf1 locus
-
T. Watanabe, S.-I. Tomizawa, K. Mitsuya et al., "Role for piRNAs and noncoding RNA in de novo DNA methylation of the imprinted mouse Rasgrf1 locus," Science, vol. 332, no. 6031, pp. 848-852, 2011.
-
(2011)
Science
, vol.332
, Issue.6031
, pp. 848-852
-
-
Watanabe, T.1
Tomizawa, S.-I.2
Mitsuya, K.3
-
27
-
-
84864781042
-
Function, targets, and evolution of caenorhabditis elegans piRNAs
-
M. P. Bagijn, L. D. Goldstein, A. Sapetschnig et al., "Function, targets, and evolution of Caenorhabditis elegans piRNAs," Science, vol. 337, no. 6094, pp. 574-578, 2012.
-
(2012)
Science
, vol.337
, Issue.6094
, pp. 574-578
-
-
Bagijn, M.P.1
Goldstein, L.D.2
Sapetschnig, A.3
-
28
-
-
84874230944
-
Piwi induces piRNA-guided transcriptional silencing and establishment of a repressive chromatin state
-
A. Le Thomas, A. K. Rogers, A. Webster et al., "Piwi induces piRNA-guided transcriptional silencing and establishment of a repressive chromatin state," Genes & Development, vol. 27, no. 4, pp. 390-399, 2013.
-
(2013)
Genes & Development
, vol.27
, Issue.4
, pp. 390-399
-
-
Le Thomas, A.1
Rogers, A.K.2
Webster, A.3
-
29
-
-
84862803181
-
Regulation of small RNA stability: Methylation and beyond
-
L. Ji and X. Chen, "Regulation of small RNA stability: methylation and beyond," Cell Research, vol. 22, no. 4, pp. 624-636, 2012.
-
(2012)
Cell Research
, vol.22
, Issue.4
, pp. 624-636
-
-
Ji, L.1
Chen, X.2
-
30
-
-
62549159996
-
2′-O-methylation stabilizes piwi-associated small RNAs and ensures DNA elimination in tetrahymena
-
H. M. Kurth and K. Mochizuki, "2′-O-methylation stabilizes Piwi-associated small RNAs and ensures DNA elimination in Tetrahymena," RNA, vol. 15, no. 4, pp. 675-685, 2009.
-
(2009)
RNA
, vol.15
, Issue.4
, pp. 675-685
-
-
Kurth, H.M.1
Mochizuki, K.2
-
31
-
-
70449566825
-
Structural and biochemical insights into 2′-O-methylation at the 3′-terminal nucleotide of RNA by hen1
-
M. C. Chio, C. Zhou, J. S. Brunzelle, and R. H. Huang, "Structural and biochemical insights into 2′-O-methylation at the 3′-terminal nucleotide of RNA by Hen1," Proceedings of the National Academy of Sciences of the United States of America, vol. 106, no. 42, pp. 17699-17704, 2009.
-
(2009)
Proceedings of the National Academy of Sciences of the United States of America
, vol.106
, Issue.42
, pp. 17699-17704
-
-
Chio, M.C.1
Zhou, C.2
Brunzelle, J.S.3
Huang, R.H.4
-
32
-
-
33746502166
-
A distinct small RNA pathway silences selfish genetic elements in the germline
-
V. V. Vagin, A. Sigova, C. Li, H. Seitz, V. Gvozdev, and P. D. Zamore, "A distinct small RNA pathway silences selfish genetic elements in the germline," Science, vol. 313, no. 5785, pp. 320-324, 2006.
-
(2006)
Science
, vol.313
, Issue.5785
, pp. 320-324
-
-
Vagin, V.V.1
Sigova, A.2
Li, C.3
Seitz, H.4
Gvozdev, V.5
Zamore, P.D.6
-
33
-
-
53449084759
-
The cajal body
-
G. E. Morris, "The Cajal body," Biochimica et Biophysica Acta-Molecular Cell Research, vol. 1783, no. 11, pp. 2108-2115, 2008.
-
(2008)
Biochimica et Biophysica Acta-Molecular Cell Research
, vol.1783
, Issue.11
, pp. 2108-2115
-
-
Morris, G.E.1
-
34
-
-
34250649780
-
Biogenesis and intranuclear trafficking of human box C/D and H/ACA RNPs
-
T. Kiss, E. Fayet, B. E. Jády, P. Richard, and M. Weber, "Biogenesis and intranuclear trafficking of human box C/D and H/ACA RNPs," Cold Spring Harbor Symposia on Quantitative Biology, vol. 71, pp. 407-417, 2006.
-
(2006)
Cold Spring Harbor Symposia on Quantitative Biology
, vol.71
, pp. 407-417
-
-
Kiss, T.1
Fayet, E.2
Jády, B.E.3
Richard, P.4
Weber, M.5
-
35
-
-
80053045739
-
Molecular mechanisms of long noncoding RNAs
-
K. C. Wang and H. Y. Chang, "Molecular mechanisms of long noncoding RNAs," Molecular Cell, vol. 43, no. 6, pp. 904-914, 2011.
-
(2011)
Molecular Cell
, vol.43
, Issue.6
, pp. 904-914
-
-
Wang, K.C.1
Chang, H.Y.2
-
37
-
-
41349116135
-
The eukaryotic genome as an RNA machine
-
P. P. Amaral, M. E. Dinger, T. R. Mercer, and J. S. Mattick, "The eukaryotic genome as an RNA machine," Science, vol. 319, no. 5871, pp. 1787-1789, 2008.
-
(2008)
Science
, vol.319
, Issue.5871
, pp. 1787-1789
-
-
Amaral, P.P.1
Dinger, M.E.2
Mercer, T.R.3
Mattick, J.S.4
-
38
-
-
84883214592
-
Sizing up long non-coding RNAs: Do lncRNAs have secondary and tertiary structure?
-
I. V. Novikova, S. P. Hennelly, and K. Y. Sanbonmatsu, "Sizing up long non-coding RNAs: do lncRNAs have secondary and tertiary structure?" BioArchitecture, vol. 2, no. 6, pp. 189-199, 2014.
-
(2014)
BioArchitecture
, vol.2
, Issue.6
, pp. 189-199
-
-
Novikova, I.V.1
Hennelly, S.P.2
Sanbonmatsu, K.Y.3
-
39
-
-
80054684399
-
Long non-coding RNA modifies chromatin: Epigenetic silencing by long non-coding RNAs
-
A. Saxena and P. Carninci, "Long non-coding RNA modifies chromatin: epigenetic silencing by long non-coding RNAs," BioEssays, vol. 33, no. 11, pp. 830-839, 2011.
-
(2011)
BioEssays
, vol.33
, Issue.11
, pp. 830-839
-
-
Saxena, A.1
Carninci, P.2
-
40
-
-
77955323879
-
A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response
-
M. Huarte, M. Guttman, D. Feldser et al., "A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response," Cell, vol. 142, no. 3, pp. 409-419, 2010.
-
(2010)
Cell
, vol.142
, Issue.3
, pp. 409-419
-
-
Huarte, M.1
Guttman, M.2
Feldser, D.3
-
41
-
-
84939812960
-
Long non-coding RNAs as surrogate indicators for chemical stress responses in human-induced pluripotent stem cells
-
H. Tani, Y. Onuma, Y. Ito, M. Torimura, and A. Asakura, "Long non-coding RNAs as surrogate indicators for chemical stress responses in human-induced pluripotent stem cells," PLoS ONE, vol. 9, no. 8, Article ID e106282, 2014.
-
(2014)
PLoS ONE
, vol.9
, Issue.8
-
-
Tani, H.1
Onuma, Y.2
Ito, Y.3
Torimura, M.4
Asakura, A.5
-
42
-
-
84887923201
-
Arabidopsis non-coding RNA regulation in abiotic stress responses
-
A. Matsui, A. H. Nguyen, K. Nakaminami, and M. Seki, "Arabidopsis non-coding RNA regulation in abiotic stress responses," International Journal of Molecular Sciences, vol. 14, no. 11, pp. 22642-22654, 2013.
-
(2013)
International Journal of Molecular Sciences
, vol.14
, Issue.11
, pp. 22642-22654
-
-
Matsui, A.1
Nguyen, A.H.2
Nakaminami, K.3
Seki, M.4
-
43
-
-
82755189462
-
Mutagens interfere with microRNA maturation by inhibiting DICER. An in silico biology analysis
-
M. Ligorio, A. Izzotti, A. Pulliero, and P. Arrigo, "Mutagens interfere with microRNA maturation by inhibiting DICER. An in silico biology analysis," Mutation Research-Fundamental and Molecular Mechanisms of Mutagenesis, vol. 717, no. 1-2, pp. 116-128, 2011.
-
(2011)
Mutation Research-Fundamental and Molecular Mechanisms of Mutagenesis
, vol.717
, Issue.1-2
, pp. 116-128
-
-
Ligorio, M.1
Izzotti, A.2
Pulliero, A.3
Arrigo, P.4
-
44
-
-
21644476468
-
Patch dock and symm dock: Servers for rigid and symmetric docking
-
D. Schneidman-Duhovny, Y. Inbar, R. Nussinov, and H. J. Wolfson, "Patch Dock and Symm Dock: servers for rigid and symmetric docking," Nucleic Acids Research, vol. 33, no. 2, pp. W363-W367, 2005.
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.2
, pp. W363-W367
-
-
Schneidman-Duhovny, D.1
Inbar, Y.2
Nussinov, R.3
Wolfson, H.J.4
|