Regulation of the expression of the Vibrio parahaemolyticus peuA gene encoding an alternative ferric enterobactin receptor

PLoS ONE

Volumn 9, Issue 8, 2014, Pages

  Tanabe, Tomotaka ^a   Kato, Ayaka ^a   Shiuchi, Keiichi ^b   Miyamoto, Katsushiro ^c   Tsujibo, Hiroshi ^c   Maki, Jun ^a   Yamamoto, Shigeo ^a   Funahashi, Tatsuya ^a  

^a MATSUYAMA UNIVERSITY   (Japan)

^b OKAYAMA UNIVERSITY   (Japan)

^c OSAKA MEDICAL COLLEGE   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ENTEROCHELIN; FERRIC ENTEROBACTIN RECEPTOR; IRON; RECEPTOR; UNCLASSIFIED DRUG; CARRIER PROTEIN; CELL SURFACE RECEPTOR; ENTEROBACTIN RECEPTOR; OUTER MEMBRANE PROTEIN;

5' UNTRANSLATED REGION; ARTICLE; BACTERIAL GENE; COMPUTER MODEL; CONTROLLED STUDY; DELETION MUTANT; GENE CONTROL; GENE EXPRESSION REGULATION; GENETIC TRANSCRIPTION; NONHUMAN; OPERON; PEUA GENE; PH; PROTEIN SECONDARY STRUCTURE; TRANSLATION INITIATION; UPREGULATION; VIBRIO PARAHAEMOLYTICUS; BIOSYNTHESIS; GENETICS; METABOLISM; PHYSIOLOGY;

BACTERIAL OUTER MEMBRANE PROTEINS; CARRIER PROTEINS; GENE EXPRESSION REGULATION, BACTERIAL; HYDROGEN-ION CONCENTRATION; OPERON; RECEPTORS, CELL SURFACE; TRANSCRIPTION, GENETIC; VIBRIO PARAHAEMOLYTICUS;

EID: 84938879879     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0105749     Document Type: Article

References (58)

1. Andrews SC, Robinson AK, Rodriguez-Quinones F (2003) Bacterial iron homeostasis. FEMS Microbiol Rev 27: 215-237. (Pubitemid 36694657)
2. Braun V, Hantke K, Koster W (1998) Bacterial iron transport: mechanisms, genetics, and regulation. Met Ions Biol Syst 35: 67-145.
3. Ratledge C, Dover LG (2000) Iron metabolism in pathogenic bacteria. Annu Rev Microbiol 54: 881-941.
4. Hider RC, Kong X (2010) Chemistry and biology of siderophores. Nat Prod Rep 27: 637-657.
5. Noinaj N, Guillier M, Barnard TJ, Buchanan SK (2010) TonB-dependent transporters: regulation, structure, and function. Annu Rev Microbiol 64: 43-60.
6. Postle K, Larsen RA (2007) TonB-dependent energy transduction between outer and cytoplasmic membranes. Biometals 20: 453-465. (Pubitemid 46776585)
7. Koster W (2001) ABC transporter-mediated uptake of iron, siderophores, heme and vitamin B12. Res Microbiol 152: 291-301.
8. Escolar L, Perez-Martin J, de Lorenzo V (1999) Opening the iron box: transcriptional metalloregulation by the Fur protein. J Bacteriol 181: 6223-6229. (Pubitemid 29512928)
9. Hantke K (2001) Iron and metal regulation in bacteria. Curr Opin Microbiol 4: 172-177.
10. Miethke M, Marahiel MA (2007) Siderophore-based iron acquisition and pathogen control. Microbiol Mol Biol Rev 71: 413-451. (Pubitemid 47429279)
11. Schubert S, Fischer D, Heesemann J (1999) Ferric enterochelin transport in Yersinia enterocolitica: molecular and evolutionary aspects. J Bacteriol 181: 6387-6395. (Pubitemid 29512949)
12. Brickman TJ, Armstrong SK (2009) Temporal signaling and differential expression of Bordetella iron transport systems: the role of ferrimones and positive regulators. Biometals 22: 33-41.
13. Dean CR, Poole K (1993) Expression of the ferric enterobactin receptor (PfeA) of Pseudomonas aeruginosa: involvement of a two-component regulatory system. Mol Microbiol 8: 1095-1103. (Pubitemid 23187028)
14. Dean CR, Neshat S, Poole K (1996) PfeR, an enterobactin-responsive activator of ferric enterobactin receptor gene expression in Pseudomonas aeruginosa. J Bacteriol 178: 5361-5369. (Pubitemid 26304367)
15. Albright LM, Huala E, Ausubel FM (1989) Prokaryotic signal transduction mediated by sensor and regulator protein pairs. Annu Rev Genet 23: 311-336. (Pubitemid 20033406)
16. Hoch JA, Varughese KI (2001) Keeping signals straight in phosphorelay signal transduction. J Bacteriol 183: 4941-4949. (Pubitemid 32750919)
17. Rowley G, Spector M, Kormanec J, Roberts M (2006) Pushing the envelope: extracytoplasmic stress responses in bacterial pathogens. Nat Rev Microbiol 4: 383-394. (Pubitemid 43771856)
18. Broberg CA, Calder TJ, Orth K (2011) Vibrio parahaemolyticus cell biology and pathogenicity determinants. Microbes Infect 13: 992-1001.
19. Igbinosa EO, Okoh AI (2008) Emerging Vibrio species: an unending threat to public health in developing countries. Res Microbiol 159: 495-506.
20. Thompson FL, Iida T, Swings J (2004) Biodiversity of vibrios. Microbiol Mol Biol Rev 68: 403-431. (Pubitemid 39238276)
21. Yamamoto S, Okujo N, Yoshida T, Matsuura S, Shinoda S (1994) Structure and iron transport activity of vibrioferrin, a new siderophore of Vibrio parahaemolyticus. J Biochem 115: 868-874. (Pubitemid 24159910)
22. Tanabe T, Funahashi T, Nakao H, Miyoshi S, Shinoda S, et al. (2003) Identification and characterization of genes required for biosynthesis and transport of the siderophore vibrioferrin in Vibrio parahaemolyticus. J Bacteriol 185: 6938-6949. (Pubitemid 37448562)
23. Funahashi T, Moriya K, Uemura S, Miyoshi S, Shinoda S, et al. (2002) Identification and characterization of pvuA, a gene encoding the ferric vibrioferrin receptor protein in Vibrio parahaemolyticus. J Bacteriol 184: 936-946. (Pubitemid 34113361)
24. Tanabe T, Funahashi T, Okajima N, Nakao H, Takeuchi Y, et al. (2011) The Vibrio parahaemolyticus pvuA1 gene (formerly termed psuA) encodes a second ferric vibrioferrin receptor that requires tonB2. FEMS Microbiol Lett 324: 73-79.
25. Funahashi T, Tanabe T, Aso H, Nakao H, Fujii Y, et al. (2003) An iron-regulated gene required for utilization of aerobactin as an exogenous siderophore in Vibrio parahaemolyticus. Microbiology 149: 1217-1225. (Pubitemid 36626170)
26. Funahashi T, Tanabe T, Shiuchi K, Nakao H, Yamamoto S (2009) Identification and characterization of genes required for utilization of desferri-ferrichrome and aerobactin in Vibrio parahaemolyticus. Biol Pharm Bull 32: 359-365.
27. Tanabe T, Funahashi T, Shiuchi K, Okajima N, Nakao H, et al. (2012) Characterization of Vibrio parahaemolyticus genes encoding the systems for utilization of enterobactin as a xenosiderophore. Microbiology 158: 2039-2049.
28. Makino K, Oshima K, Kurokawa K, Yokoyama K, Uda T, et al. (2003) Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae. Lancet 361: 743-749. (Pubitemid 36293629)
29. Demarre G, Guérout AM, Matsumoto-Mashimo C, Rowe-Magnus DA, Marlière P, et al. (2005) A new family of mobilizable suicide plasmids based on broad host range R388 plasmid (IncW) and RP4 plasmid (IncPα conjugative machineries and their cognate Escherichia coli host strains. Res Microbiol 156: 245-255. (Pubitemid 40320963)
30. Sambrook J, Russell DW (2001) Molecular cloning: a laboratory manual. vol. 1 to 3, 3rd ed.Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
31. Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, et al. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402. (Pubitemid 27359211)
32. Yamamoto S, Akiyama T, Okujo N, Matsu-ura S, Shinoda S (1995) Demonstration of a ferric vibrioferrin-binding protein in the outer membrane of Vibrio parahaemolyticus. Microbiol Immunol 39: 759-766.
33. Kuroda T, Mizushima T, Tsuchiya T (2005) Physiological roles of three Na+/H+ antiporters in the halophilic bacterium Vibrio parahaemolyticus. Microbiol Immunol 49: 711-719.
34. Heckman KL, Pease LR (2007) Gene splicing and mutagenesis by PCR-driven overlap extension. Nat Protoc 2: 924-932. (Pubitemid 46758810)
35. Keen NT, Tamaki S, Kobayashi D, Trollinger D (1988) Improved broad-host-range plasmids for DNA cloning in gram-negative bacteria. Gene 70: 191-197. (Pubitemid 18263496)
36. Hantke K (1983) Identification of an iron uptake system specific for coprogen and rhodotorulic acid in Escherichia coli K12. Mol Gen Genet 191: 301-306.
37. Lundrigan MD, Kadner RJ (1986) Nucleotide sequence of the gene for the ferrienterochelin receptor FepA in Escherichia coli. Homology among outer membrane receptors that interact with TonB. J Biol Chem 261: 10797-10801. (Pubitemid 17194869)
38. Braun V, Hantke K (1991) Genetics of bacterial iron transport. In: Winkelman G, editor. Handbook of microbial iron chelates. Boca Raton, Fla: CRC Press. pp. 107-138.
39. Stojiljkovic I, Baumler AJ, Hantke K (1994) Fur regulon in gram-negative bacteria: Identification and characterization of new iron-regulated Escherichia coli genes by a Fur titration assay. J Mol Biol 236: 531-545.
40. Pogliano J, Lynch AS, Belin D, Lin EC, Beckwith J (1997) Regulation of Escherichia coli cell envelope proteins involved in protein folding and degradation by the Cpx two-component system. Genes Dev 11: 1169-1182. (Pubitemid 27225225)
41. Yamamoto K, Ishihama A (2006) Characterization of copper-inducible promoters regulated by CpxA/CpxR in Escherichia coli. Biosci Biotechnol Biochem 70: 1688-1695. (Pubitemid 44124928)
42. Vogt SL, Raivio TL (2012) Just scratching the surface: an expanding view of the Cpx envelope stress response. FEMS Microbiol Lett 326: 2-11.
43. Weber RF, Silverman PM (1988) The Cpx proteins of Escherichia coli K12: Structure of the CpxA polypeptide as an inner membrane component. J Mol Biol 203: 467-478.
44. Salgado H, Moreno-Hagelsieb G, Smith TF, Collado-Vides J (2000) Operons in Escherichia coli: genomic analyses and predictions. Proc Natl Acad Sci USA 97: 6652-6657. (Pubitemid 30412769)
45. Sato K, Hamada M, Asai K, Mituyama T (2009) CENTROIDFOLD: a web server for RNA secondary structure prediction. Nucleic Acids Res 37: W277-280.
46. Dean CR, Poole K (1993) Cloning and characterization of the ferric enterobactin receptor gene (pfeA) of Pseudomonas aeruginosa. J Bacteriol 175: 317-324. (Pubitemid 23031991)
47. Anderson MT, Armstrong SK. (2004) The BfeR regulator mediates enterobactin-inducible expression of Bordetella enterobactin utilization genes. J Bacteriol 186: 7302-7311. (Pubitemid 39383115)
48. Mey AR, Wyckoff EE, Oglesby AG, Rab E, Taylor RK, et al. (2002) Identification of the Vibrio cholerae enterobactin receptors VctA and IrgA: IrgA is not required for virulence. Infect Immun 70: 3419-3426. (Pubitemid 34665978)
49. Naka H, Crosa JH (2012) Identification and characterization of a novel outer membrane protein receptor FetA for ferric enterobactin transport in Vibrio anguillarum 775 (pJM1). Biometals 25: 125-133.
50. Hollander A, Mercante AD, Shafer WM, Cornelissen CN (2011) The iron-repressed, AraC-like regulator MpeR activates expression of fetA in Neisseria gonorrhoeae. Infect Immun 79: 4764-4776.
51. Raymond KN, Dertz EA, Kim SS (2003) Enterobactin: an archetype for microbial iron transport. Proc Natl Acad Sci USA 100: 3584-3588. (Pubitemid 36418077)
52. Earhart CF (2004) Iron uptake via the enterobactin. In: Crosa JH, Mey AR, Payne SM, editors. Iron transport in bacteria. Washington, DC: American Society for Microbiology. pp. 133-146.
53. Fiedler HP, Krastel P, Muller J, Gebhardt K, Zeeck A (2001) Enterobactin: the characteristic catecholate siderophore of Enterobacteriaceae is produced by Streptomyces species. FEMS Microbiol Lett 196: 147-151. (Pubitemid 32232252)
54. Valdebenito M, Crumbliss AL, Winkelmann G, Hantke K (2006) Environmental factors influence the production of enterobactin, salmochelin, aerobactin, and yersiniabactin in Escherichia coli strain Nissle 1917. Int J Med Microbiol 296: 513-520. (Pubitemid 44693463)
55. Schmitt MP (1999) Identification of a two-component signal transduction system from Corynebacterium diphtheriae that activates gene expression in response to the presence of heme and hemoglobin. J Bacteriol 181: 5330-5340.
56. Danese PN, Silhavy TJ (1998) CpxP, a stress-combative member of the Cpx regulon. J Bacteriol 180: 831-839. (Pubitemid 28084207)
57. Nakayama S, Watanabe H (1995) Involvement of cpxA, a sensor of a two-component regulatory system, in the pH-dependent regulation of expression of Shigella sonnei virF gene. J Bacteriol 177: 5062-5069.
58. Dore JE, Lukas R, Sadler DW, Church MJ, Karl DM (2009) Physical and biogeochemical modulation of ocean acidification in the central North Pacific. Proc Natl Acad Sci USA 106: 12235-12240.