메뉴 건너뛰기




Volumn 17, Issue 9, 2015, Pages 3379-3390

Evidence for synergistic control of glutamate biosynthesis by glutamate dehydrogenases and glutamate in Bacillus subtilis

Author keywords

[No Author keywords available]

Indexed keywords

ARGININE; BACTERIAL PROTEIN; GLTC PROTEIN, BACILLUS SUBTILIS; GLUTAMATE DEHYDROGENASE; GLUTAMIC ACID; REPRESSOR PROTEIN; TRANSACTIVATOR PROTEIN;

EID: 84938489411     PISSN: 14622912     EISSN: 14622920     Source Type: Journal    
DOI: 10.1111/1462-2920.12813     Document Type: Article
Times cited : (28)

References (46)
  • 1
    • 0031756184 scopus 로고    scopus 로고
    • Role and regulation of Bacillus subtilis glutamate dehydrogenase genes
    • Belitsky, B.R., and Sonenshein, A.L. (1998) Role and regulation of Bacillus subtilis glutamate dehydrogenase genes. J Bacteriol 180: 6298-6305.
    • (1998) J Bacteriol , vol.180 , pp. 6298-6305
    • Belitsky, B.R.1    Sonenshein, A.L.2
  • 2
    • 2442649038 scopus 로고    scopus 로고
    • Modulation of activity of Bacillus subtilis regulatory proteins GltC and TnrA by glutamate dehydrogenase
    • Belitsky, B.R., and Sonenshein, A.L. (2004) Modulation of activity of Bacillus subtilis regulatory proteins GltC and TnrA by glutamate dehydrogenase. J Bacteriol 186: 3399-3407.
    • (2004) J Bacteriol , vol.186 , pp. 3399-3407
    • Belitsky, B.R.1    Sonenshein, A.L.2
  • 3
    • 2442669092 scopus 로고    scopus 로고
    • CcpA-dependent regulation of Bacillus subtilis glutamate dehydrogenase gene expression
    • Belitsky, B.R., Kim, H.J., and Sonenshein, A.L. (2004) CcpA-dependent regulation of Bacillus subtilis glutamate dehydrogenase gene expression. J Bacteriol 186: 3392-3398.
    • (2004) J Bacteriol , vol.186 , pp. 3392-3398
    • Belitsky, B.R.1    Kim, H.J.2    Sonenshein, A.L.3
  • 4
    • 84894479800 scopus 로고    scopus 로고
    • Metabolism and development - integration of micro computed tomography data and metabolite profiling reveals metabolic reporgramming from floral initiation to silique development
    • Bellaire, A., Ischebeck, T., Staedler, Y., Weinhaeuser, I., Mair, A., Parameswaran, S., etal. (2014) Metabolism and development - integration of micro computed tomography data and metabolite profiling reveals metabolic reporgramming from floral initiation to silique development. New Phytol 202: 322-335.
    • (2014) New Phytol , vol.202 , pp. 322-335
    • Bellaire, A.1    Ischebeck, T.2    Staedler, Y.3    Weinhaeuser, I.4    Mair, A.5    Parameswaran, S.6
  • 5
    • 0024730354 scopus 로고
    • Positive regulation of glutamate biosynthesis in Bacillus subtilis
    • Bohannon, D.E., and Sonenshein, A.L. (1989) Positive regulation of glutamate biosynthesis in Bacillus subtilis. J Bacteriol 171: 4718-4727.
    • (1989) J Bacteriol , vol.171 , pp. 4718-4727
    • Bohannon, D.E.1    Sonenshein, A.L.2
  • 6
    • 42549145631 scopus 로고    scopus 로고
    • Control of the cell elongation-division cycle by shuttling of PBP1 protein in Bacillus subtilis
    • Claessen, D., Emmins, D., Hamoen, L.W., Daniel, R.A., Errington, J., and Edwards, D.H. (2008) Control of the cell elongation-division cycle by shuttling of PBP1 protein in Bacillus subtilis. Mol Microbiol 68: 1029-1046.
    • (2008) Mol Microbiol , vol.68 , pp. 1029-1046
    • Claessen, D.1    Emmins, D.2    Hamoen, L.W.3    Daniel, R.A.4    Errington, J.5    Edwards, D.H.6
  • 7
    • 38449095243 scopus 로고    scopus 로고
    • Trigger enzymes: bifunctional proteins active in metabolism and in controlling gene expression
    • Commichau, F.M., and Stülke, J. (2008) Trigger enzymes: bifunctional proteins active in metabolism and in controlling gene expression. Mol Microbiol 67: 692-702.
    • (2008) Mol Microbiol , vol.67 , pp. 692-702
    • Commichau, F.M.1    Stülke, J.2
  • 8
    • 33645878600 scopus 로고    scopus 로고
    • Regulatory links between carbon and nitrogen metabolism
    • Commichau, F.M., Forchhammer, K., and Stülke, J. (2006) Regulatory links between carbon and nitrogen metabolism. Curr Opin Microbiol 9: 167-172.
    • (2006) Curr Opin Microbiol , vol.9 , pp. 167-172
    • Commichau, F.M.1    Forchhammer, K.2    Stülke, J.3
  • 10
    • 34447569343 scopus 로고    scopus 로고
    • A regulatory protein-protein interaction governs glutamate biosynthesis in Bacillus subtilis: the glutamate dehydrogenase RocG moonlights in controlling the transcription factor GltC
    • Commichau, F.M., Herzberg, C., Tripal, P., Valerius, O., and Stülke, J. (2007b) A regulatory protein-protein interaction governs glutamate biosynthesis in Bacillus subtilis: the glutamate dehydrogenase RocG moonlights in controlling the transcription factor GltC. Mol Microbiol 65: 642-654.
    • (2007) Mol Microbiol , vol.65 , pp. 642-654
    • Commichau, F.M.1    Herzberg, C.2    Tripal, P.3    Valerius, O.4    Stülke, J.5
  • 11
    • 47049089928 scopus 로고    scopus 로고
    • Glutamate metabolism in Bacillus subtilis: gene expression and enzyme activities evolved to avoid futile cycles and to allow rapid responses to perturbations of the system
    • Commichau, F.M., Gunka, K., Landmann, J.J., and Stülke, J. (2008) Glutamate metabolism in Bacillus subtilis: gene expression and enzyme activities evolved to avoid futile cycles and to allow rapid responses to perturbations of the system. J Bacteriol 190: 3557-3564.
    • (2008) J Bacteriol , vol.190 , pp. 3557-3564
    • Commichau, F.M.1    Gunka, K.2    Landmann, J.J.3    Stülke, J.4
  • 12
    • 56549119570 scopus 로고    scopus 로고
    • Turning a hobby into a job: how duplicated genes find new functions
    • Conant, G.C., and Wolfe, K.H. (2008) Turning a hobby into a job: how duplicated genes find new functions. Nat Rev Genet 9: 938-950.
    • (2008) Nat Rev Genet , vol.9 , pp. 938-950
    • Conant, G.C.1    Wolfe, K.H.2
  • 13
    • 0030967333 scopus 로고    scopus 로고
    • Role of the transcriptional activator RocR in the arginine-degradation pathway of Bacillus subtilis
    • Gardan, R., Rapoport, G., and Débarbouillé, M. (1997) Role of the transcriptional activator RocR in the arginine-degradation pathway of Bacillus subtilis. Mol Microbiol 24: 825-837.
    • (1997) Mol Microbiol , vol.24 , pp. 825-837
    • Gardan, R.1    Rapoport, G.2    Débarbouillé, M.3
  • 14
    • 37549068524 scopus 로고    scopus 로고
    • Clp-dependent proteolysis down-regulates central metabolic pathways in glucose-starved Bacillus subtilis
    • Gerth, U., Kock, H., Küster, I., Michalik, S., Switzer, R.L., and Hecker, M. (2008) Clp-dependent proteolysis down-regulates central metabolic pathways in glucose-starved Bacillus subtilis. J Bacteriol 190: 321-331.
    • (2008) J Bacteriol , vol.190 , pp. 321-331
    • Gerth, U.1    Kock, H.2    Küster, I.3    Michalik, S.4    Switzer, R.L.5    Hecker, M.6
  • 15
    • 1642266935 scopus 로고    scopus 로고
    • Gene duplication and biased functional retention of paralogs in bacterial genomes
    • Gevers, D., Vandepoele, K., Simillion, C., and Van de Peer, Y. (2004) Gene duplication and biased functional retention of paralogs in bacterial genomes. Trends Microbiol 12: 148-154.
    • (2004) Trends Microbiol , vol.12 , pp. 148-154
    • Gevers, D.1    Vandepoele, K.2    Simillion, C.3    Van de Peer, Y.4
  • 16
    • 14144255920 scopus 로고    scopus 로고
    • Rapid evolution of expression and regulatory divergences after yeast gene duplication
    • Gu, X., Zhang, Z., and Huang, W. (2005) Rapid evolution of expression and regulatory divergences after yeast gene duplication. Proc Natl Acad Sci USA 102: 707-712.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 707-712
    • Gu, X.1    Zhang, Z.2    Huang, W.3
  • 17
    • 0029590029 scopus 로고
    • Antibiotic resistance cassettes for Bacillus subtilis
    • Guérout-Fleury, A.M., Shazand, K., Frandsen, N., and Stragier, P. (1995) Antibiotic resistance cassettes for Bacillus subtilis. Gene 167: 335-336.
    • (1995) Gene , vol.167 , pp. 335-336
    • Guérout-Fleury, A.M.1    Shazand, K.2    Frandsen, N.3    Stragier, P.4
  • 18
    • 84863594395 scopus 로고    scopus 로고
    • Control of glutamate homeostasis in Bacillus subtilis: a complex interplay between ammonium assimilation, glutamate biosynthesis and degradation
    • Gunka, K., and Commichau, F.M. (2012) Control of glutamate homeostasis in Bacillus subtilis: a complex interplay between ammonium assimilation, glutamate biosynthesis and degradation. Mol Microbiol 85: 213-224.
    • (2012) Mol Microbiol , vol.85 , pp. 213-224
    • Gunka, K.1    Commichau, F.M.2
  • 19
    • 77954383542 scopus 로고    scopus 로고
    • Functional dissection of a trigger enzyme: mutations of the Bacillus subtilis glutamate dehydrogenase RocG that affect differentially its catalytic activity and regulatory properties
    • Gunka, K., Newman, J.A., Commichau, F.M., Herzberg, C., Rodrigues, C., Hewitt, L., etal. (2010) Functional dissection of a trigger enzyme: mutations of the Bacillus subtilis glutamate dehydrogenase RocG that affect differentially its catalytic activity and regulatory properties. J Mol Biol 400: 815-827.
    • (2010) J Mol Biol , vol.400 , pp. 815-827
    • Gunka, K.1    Newman, J.A.2    Commichau, F.M.3    Herzberg, C.4    Rodrigues, C.5    Hewitt, L.6
  • 20
    • 84857887703 scopus 로고    scopus 로고
    • A high-frequency mutation in Bacillus subtilis: requirements for the decryptification of the gudB glutamate dehydrogenase gene
    • Gunka, K., Tholen, S., Gerwig, J., Herzberg, C., Stülke, J., and Commichau, F.M. (2012) A high-frequency mutation in Bacillus subtilis: requirements for the decryptification of the gudB glutamate dehydrogenase gene. J Bacteriol 194: 1036-1044.
    • (2012) J Bacteriol , vol.194 , pp. 1036-1044
    • Gunka, K.1    Tholen, S.2    Gerwig, J.3    Herzberg, C.4    Stülke, J.5    Commichau, F.M.6
  • 21
    • 84878972178 scopus 로고    scopus 로고
    • Selection-driven accumulation of suppressor mutants in Bacillus subtilis: the apparent high mutation frequency of the cryptic gudB gene and the rapid clonal expansion of gudB(+) suppressors are due to growth under selection
    • Gunka, K., Stannek, L., Care, R.A., and Commichau, F.M. (2013) Selection-driven accumulation of suppressor mutants in Bacillus subtilis: the apparent high mutation frequency of the cryptic gudB gene and the rapid clonal expansion of gudB(+) suppressors are due to growth under selection. PLoS ONE 8: e66120.
    • (2013) PLoS ONE , vol.8 , pp. e66120
    • Gunka, K.1    Stannek, L.2    Care, R.A.3    Commichau, F.M.4
  • 22
    • 0028129875 scopus 로고
    • Why does Escherichia coli have two primary pathways for synthesis of glutamate?
    • Helling, R.B. (1994) Why does Escherichia coli have two primary pathways for synthesis of glutamate? J Bacteriol 176: 4664-4668.
    • (1994) J Bacteriol , vol.176 , pp. 4664-4668
    • Helling, R.B.1
  • 23
    • 36549032156 scopus 로고    scopus 로고
    • SPINE: a method for the rapid detection and analysis of protein-protein interactions in vivo
    • Herzberg, C., Weidinger, L.A., Dörrbecker, B., Hübner, S., Stülke, J., and Commichau, F.M. (2007) SPINE: a method for the rapid detection and analysis of protein-protein interactions in vivo. Proteomics 7: 4032-4035.
    • (2007) Proteomics , vol.7 , pp. 4032-4035
    • Herzberg, C.1    Weidinger, L.A.2    Dörrbecker, B.3    Hübner, S.4    Stülke, J.5    Commichau, F.M.6
  • 24
    • 0032510783 scopus 로고    scopus 로고
    • A bacterial two-hybrid system based on a reconstituted signal transduction pathway
    • Karimova, G., Pidoux, J., Ullmann, A., and Landant, D. (1998) A bacterial two-hybrid system based on a reconstituted signal transduction pathway. Proc Natl Acad Sci USA 95: 5752-5756.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 5752-5756
    • Karimova, G.1    Pidoux, J.2    Ullmann, A.3    Landant, D.4
  • 25
    • 0029006115 scopus 로고
    • Salt stress is an environmental signal affecting degradative enzyme synthesis in Bacillus subtilis
    • Kunst, F., and Rapoport, G. (1995) Salt stress is an environmental signal affecting degradative enzyme synthesis in Bacillus subtilis. J Bacteriol 177: 2403-2407.
    • (1995) J Bacteriol , vol.177 , pp. 2403-2407
    • Kunst, F.1    Rapoport, G.2
  • 27
    • 0034634395 scopus 로고    scopus 로고
    • The evolutionary fate and consequences of duplicate genes
    • Lynch, M., and Conery, J.S. (2000) The evolutionary fate and consequences of duplicate genes. Science 290: 1151-1155.
    • (2000) Science , vol.290 , pp. 1151-1155
    • Lynch, M.1    Conery, J.S.2
  • 28
    • 0142153893 scopus 로고    scopus 로고
    • Ammonia assimilation by Saccharomyces cerevisiae
    • Magasanik, B. (2003) Ammonia assimilation by Saccharomyces cerevisiae. Eukaryot Cell 2: 827-829.
    • (2003) Eukaryot Cell , vol.2 , pp. 827-829
    • Magasanik, B.1
  • 29
    • 84880014383 scopus 로고    scopus 로고
    • Methodological approaches to help unravel the intracellular metabolome of Bacillus subtilis
    • Meyer, H., Weidmann, H., and Lalk, M. (2013) Methodological approaches to help unravel the intracellular metabolome of Bacillus subtilis. Microb Cell Fact 12: 69.
    • (2013) Microb Cell Fact , vol.12 , pp. 69
    • Meyer, H.1    Weidmann, H.2    Lalk, M.3
  • 30
    • 0028219162 scopus 로고
    • A simple modification of Blum's silver stain method allows for 30 minute detection of proteins in polyacrylamide gels
    • Nesterenko, M.V., Tilley, M., and Upton, S.J. (1994) A simple modification of Blum's silver stain method allows for 30 minute detection of proteins in polyacrylamide gels. J Biochem Biophys Methods 28: 239-242.
    • (1994) J Biochem Biophys Methods , vol.28 , pp. 239-242
    • Nesterenko, M.V.1    Tilley, M.2    Upton, S.J.3
  • 32
    • 84902511120 scopus 로고    scopus 로고
    • How duplicated transcription regulators can diversify to govern the expression of nonoverlapping sets of genes
    • Peréz, J.C., Fordyce, P.M., Lohse, M.B., Hanson-Smith, V., DeRisi, J.L., and Johnson, A.D. (2014) How duplicated transcription regulators can diversify to govern the expression of nonoverlapping sets of genes. Genes Dev 28: 1272-1277.
    • (2014) Genes Dev , vol.28 , pp. 1272-1277
    • Peréz, J.C.1    Fordyce, P.M.2    Lohse, M.B.3    Hanson-Smith, V.4    DeRisi, J.L.5    Johnson, A.D.6
  • 33
    • 33845970515 scopus 로고    scopus 로고
    • Molecular mechanism of the regulation of Bacillus subtilis gltAB expression by GltC
    • Picossi, S., Belitsky, B.R., and Sonenshein, A.L. (2007) Molecular mechanism of the regulation of Bacillus subtilis gltAB expression by GltC. J Mol Biol 365: 1298-1313.
    • (2007) J Mol Biol , vol.365 , pp. 1298-1313
    • Picossi, S.1    Belitsky, B.R.2    Sonenshein, A.L.3
  • 34
    • 0242276682 scopus 로고    scopus 로고
    • Nitrogen assimilation and global regulation in Escherichia coli
    • Reitzer, L.J. (2003) Nitrogen assimilation and global regulation in Escherichia coli. Annu Rev Microbiol 57: 155-176.
    • (2003) Annu Rev Microbiol , vol.57 , pp. 155-176
    • Reitzer, L.J.1
  • 35
    • 0035895278 scopus 로고    scopus 로고
    • Genetic architecture of thermal adaptation in Escherichia coli
    • Riehle, M.M., Bennet, A.F., and Long, A.D. (2001) Genetic architecture of thermal adaptation in Escherichia coli. Proc Natl Acad Sci USA 98: 525-530.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 525-530
    • Riehle, M.M.1    Bennet, A.F.2    Long, A.D.3
  • 37
    • 36248971737 scopus 로고    scopus 로고
    • Control of key metabolic intersections in Bacillus subtilis
    • Sonenshein, A.L. (2007) Control of key metabolic intersections in Bacillus subtilis. Nat Rev Microbiol 5: 917-927.
    • (2007) Nat Rev Microbiol , vol.5 , pp. 917-927
    • Sonenshein, A.L.1
  • 38
    • 84893344600 scopus 로고    scopus 로고
    • Monitoring intraspecies competition in a bacterial cell population by cocultivation of fluorescently labelled strains
    • Stannek, L., Egelkamp, R., Gunka, K., and Commichau, F.M. (2014) Monitoring intraspecies competition in a bacterial cell population by cocultivation of fluorescently labelled strains. J Vis Exp 18: e51196.
    • (2014) J Vis Exp , vol.18 , pp. e51196
    • Stannek, L.1    Egelkamp, R.2    Gunka, K.3    Commichau, F.M.4
  • 39
    • 84920639697 scopus 로고    scopus 로고
    • Factors that mediate and prevent degradation of the unstable GudB protein in Bacillus subtils
    • Stannek, L., Gunka, K., Care, R.A., Gerth, U., and Commichau, F.M. (2015) Factors that mediate and prevent degradation of the unstable GudB protein in Bacillus subtils. Front Microbiol 5: 758.
    • (2015) Front Microbiol , vol.5 , pp. 758
    • Stannek, L.1    Gunka, K.2    Care, R.A.3    Gerth, U.4    Commichau, F.M.5
  • 40
    • 2442537233 scopus 로고    scopus 로고
    • Gene regulatory network growth by duplication
    • Teichmann, S.A., and Babu, M.M. (2004) Gene regulatory network growth by duplication. Nat Genet 36: 492-496.
    • (2004) Nat Genet , vol.36 , pp. 492-496
    • Teichmann, S.A.1    Babu, M.M.2
  • 41
    • 34250650807 scopus 로고    scopus 로고
    • Profiling of alterations in platelet proteins during storage of platelet concentrations
    • Thiele, T., Steil, L., Gebhard, S., Scharf, C., Hammer, E., Brigulla, M., etal. (2007) Profiling of alterations in platelet proteins during storage of platelet concentrations. Transfusion 47: 1221-1233.
    • (2007) Transfusion , vol.47 , pp. 1221-1233
    • Thiele, T.1    Steil, L.2    Gebhard, S.3    Scharf, C.4    Hammer, E.5    Brigulla, M.6
  • 42
    • 0029871347 scopus 로고    scopus 로고
    • PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in S. cerevisiae
    • Wach, A. (1996) PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in S. cerevisiae. Yeast 12: 259-265.
    • (1996) Yeast , vol.12 , pp. 259-265
    • Wach, A.1
  • 43
    • 0142106372 scopus 로고    scopus 로고
    • The regulatory link between carbon and nitrogen metabolism in Bacillus subtilis: regulation of the gltAB operon by the catabolite control protein CcpA
    • Wacker, I., Ludwig, H., Reif, I., Blencke, H.M., Detsch, C., and Stülke, J. (2003) The regulatory link between carbon and nitrogen metabolism in Bacillus subtilis: regulation of the gltAB operon by the catabolite control protein CcpA. Microbiology 149: 3001-3009.
    • (2003) Microbiology , vol.149 , pp. 3001-3009
    • Wacker, I.1    Ludwig, H.2    Reif, I.3    Blencke, H.M.4    Detsch, C.5    Stülke, J.6
  • 44
    • 0003702465 scopus 로고
    • Regulation of glutamine synthesis in vivo in E. coli
    • In Prusiner, S.B., and Stadtmann, E.R. (eds). New York, NY, USA: Academic Press.
    • Wohlheuter, R.M., Schutt, H., and Holzer, H. (1973) Regulation of glutamine synthesis in vivo in E. coli. In The Enzymes of Glutamine Metabolism. Prusiner, S.B., and Stadtmann, E.R. (eds). New York, NY, USA: Academic Press, pp. 45-65.
    • (1973) The Enzymes of Glutamine Metabolism , pp. 45-65
    • Wohlheuter, R.M.1    Schutt, H.2    Holzer, H.3
  • 46
    • 9244247603 scopus 로고    scopus 로고
    • Evolving protein functional diversity in new genes of Drosophila
    • Zhang, J., Dean, A.M., Brunet, F., and Long, M. (2004) Evolving protein functional diversity in new genes of Drosophila. Proc Natl Acad Sci USA 101: 16246-16250.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 16246-16250
    • Zhang, J.1    Dean, A.M.2    Brunet, F.3    Long, M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.