BioMiCo: A supervised Bayesian model for inference of microbial community structure

Microbiome

Volumn 3, Issue 1, 2015, Pages

  Shafiei, Mahdi ^a   Dunn, Katherine A ^a   Boon, Eva ^a   MacDonald, Shelley M ^a   Walsh, David A ^b   Gu, Hong ^a   Bielawski, Joseph P ^a  

^a DALHOUSIE UNIVERSITY   (Canada)

^b Gina Cody School of Engineering and Computer Science   (Canada)

Author keywords

Admixture model; Bayesian model; Hierarchical mixed membership model; Human; Microbial community structure; Microbiome; OTU abundance data; Supervised learning; Temperate coastal ocean

Indexed keywords

DNA;

ACCURACY; ALGORITHM; ARTICLE; BACTERIA; BAYES THEOREM; CHEMOTAXONOMY; COMMUNITY STRUCTURE; COMMUNITY SUCCESSION; DATA ANALYSIS; FEMALE; HUMAN; INTESTINE FLORA; MICROBIAL COMMUNITY; MICROBIAL DIVERSITY; MICROBIOME; NONHUMAN; NUGENT SCORE; ORGANISMAL INTERACTION; PRIORITY JOURNAL; PROBABILITY; SCORING SYSTEM; SEASHORE; SEASONAL VARIATION; SIMULATION; TIME SERIES ANALYSIS; VAGINA FLORA; VAGINITIS;

BACTERIA (MICROORGANISMS);

EID: 84938484590     PISSN: None     EISSN: 20492618     Source Type: Journal    
DOI: 10.1186/s40168-015-0073-x     Document Type: Article

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