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Volumn 9, Issue 3, 2014, Pages

Gut microbiota signatures predict host and microbiota responses to dietary interventions in obese individuals

Author keywords

[No Author keywords available]

Indexed keywords

CHOLESTEROL; INSULIN;

EID: 84897144707     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0090702     Document Type: Article
Times cited : (165)

References (53)
  • 1
    • 84864780633 scopus 로고    scopus 로고
    • Host responses to the human microbiome
    • Bäckhed F (2012) Host responses to the human microbiome. Nutr Rev 70: S14-S17.
    • (2012) Nutr Rev , vol.70
    • Bäckhed, F.1
  • 5
    • 80054103361 scopus 로고    scopus 로고
    • Obesity and the gut microbiota
    • Flint HJ (2011) Obesity and the gut microbiota. J Clin Gastroenterol 45: S128-S132.
    • (2011) J Clin Gastroenterol , vol.45
    • Flint, H.J.1
  • 8
    • 84873718952 scopus 로고    scopus 로고
    • Therapeutic modulation of intestinal dysbiosis
    • Walker AW, Lawley TD (2012) Therapeutic modulation of intestinal dysbiosis. Pharmacological Research 69: 75-86.
    • (2012) Pharmacological Research , vol.69 , pp. 75-86
    • Walker, A.W.1    Lawley, T.D.2
  • 10
    • 84876110893 scopus 로고    scopus 로고
    • Inter-individual differences in response to dietary intervention: Integrating omics platforms towards personalised dietary recommendations
    • Lampe JW, Navarro SL, Hullar MAJ, Shojaie A (2013) Inter-individual differences in response to dietary intervention: Integrating omics platforms towards personalised dietary recommendations. Proc Nutr Soc 72: 207-218.
    • (2013) Proc Nutr Soc , vol.72 , pp. 207-218
    • Lampe, J.W.1    Navarro, S.L.2    Hullar, M.A.J.3    Shojaie, A.4
  • 11
    • 84872463755 scopus 로고    scopus 로고
    • Dietary modulation of the human gut microbiota
    • Louis P (2012) Dietary modulation of the human gut microbiota. Agro Food Industry Hi-Tech 23: 26-28.
    • (2012) Agro Food Industry Hi-Tech , vol.23 , pp. 26-28
    • Louis, P.1
  • 12
    • 78751580602 scopus 로고    scopus 로고
    • Dominant and diet-responsive groups of bacteria within the human colonic microbiota
    • Walker AW, Ince J, Duncan SH, Webster LM, Holtrop G, et al. (2011) Dominant and diet-responsive groups of bacteria within the human colonic microbiota. Isme Journal 5: 220-230.
    • (2011) Isme Journal , vol.5 , pp. 220-230
    • Walker, A.W.1    Ince, J.2    Duncan, S.H.3    Webster, L.M.4    Holtrop, G.5
  • 13
    • 79955492715 scopus 로고    scopus 로고
    • Fecal butyrate levels vary widely among individuals but are usually increased by a diet high in resistant starch
    • McOrist AL, Miller RB, Bird AR, Keogh JB, Noakes M, et al. (2011) Fecal butyrate levels vary widely among individuals but are usually increased by a diet high in resistant starch. J Nutr 141: 883-889.
    • (2011) J Nutr , vol.141 , pp. 883-889
    • McOrist, A.L.1    Miller, R.B.2    Bird, A.R.3    Keogh, J.B.4    Noakes, M.5
  • 14
    • 84861964370 scopus 로고    scopus 로고
    • Is it time for a metagenomic basis of therapeutics?
    • Haiser HJ, Turnbaugh PJ (2012) Is it time for a metagenomic basis of therapeutics? Science 336: 1253-1255.
    • (2012) Science , vol.336 , pp. 1253-1255
    • Haiser, H.J.1    Turnbaugh, P.J.2
  • 15
    • 62149145396 scopus 로고    scopus 로고
    • Species response to environmental change: Impacts of food web interactions and evolution
    • Harmon JP, Moran NA, Ives AR (2009) Species response to environmental change: Impacts of food web interactions and evolution. Science 323: 1347-1350.
    • (2009) Science , vol.323 , pp. 1347-1350
    • Harmon, J.P.1    Moran, N.A.2    Ives, A.R.3
  • 16
    • 84876965054 scopus 로고    scopus 로고
    • Intake of whole-grain and fiber-rich rye bread versus refined wheat bread does not differentiate intestinal microbiota composition in Finnish adults with metabolic syndrome
    • Lappi J, Salojärvi J, Kolehmainen M, Mykkänen H, Poutanen K, et al. (2013) Intake of whole-grain and fiber-rich rye bread versus refined wheat bread does not differentiate intestinal microbiota composition in Finnish adults with metabolic syndrome. J Nutr 143:648-655.
    • (2013) J Nutr , vol.143 , pp. 648-655
    • Lappi, J.1    Salojärvi, J.2    Kolehmainen, M.3    Mykkänen, H.4    Poutanen, K.5
  • 17
    • 77951977802 scopus 로고    scopus 로고
    • Comparative analysis of fecal DNA extraction methods with phylogenetic microarray: Effective recovery of bacterial and archaeal DNA using mechanical cell lysis
    • Salonen A, Nikkila J, Jalanka-Tuovinen J, Immonen O, Rajilic-Stojanovic M, et al. (2010) Comparative analysis of fecal DNA extraction methods with phylogenetic microarray: Effective recovery of bacterial and archaeal DNA using mechanical cell lysis. J Microbiol Methods 81: 127-134.
    • (2010) J Microbiol Methods , vol.81 , pp. 127-134
    • Salonen, A.1    Nikkila, J.2    Jalanka-Tuovinen, J.3    Immonen, O.4    Rajilic-Stojanovic, M.5
  • 18
    • 84880270337 scopus 로고    scopus 로고
    • Insight into the prebiotic concept: Lessons from an exploratory, double blind intervention study with inulin-type fructans in obese women
    • Dewulf EM, Cani PD, Claus SP, Fuentes S, Puylaert PG, et al. (2013) Insight into the prebiotic concept: Lessons from an exploratory, double blind intervention study with inulin-type fructans in obese women. Gut 62: 1112-1121.
    • (2013) Gut , vol.62 , pp. 1112-1121
    • Dewulf, E.M.1    Cani, P.D.2    Claus, S.P.3    Fuentes, S.4    Puylaert, P.G.5
  • 19
    • 84878980971 scopus 로고    scopus 로고
    • Impact of short term consumption of diets high in either non-starch polysaccharides or resistant starch in comparison with moderate weight loss on indices of insulin sensitivity in subjects with metabolic syndrome
    • Lobley GE, Holtrop G, Bremner DM, Calder AG, Milne E, et al. (2013) Impact of short term consumption of diets high in either non-starch polysaccharides or resistant starch in comparison with moderate weight loss on indices of insulin sensitivity in subjects with metabolic syndrome. Nutrients 5: 2144-2172.
    • (2013) Nutrients , vol.5 , pp. 2144-2172
    • Lobley, G.E.1    Holtrop, G.2    Bremner, D.M.3    Calder, A.G.4    Milne, E.5
  • 20
    • 79960854386 scopus 로고    scopus 로고
    • Intestinal microbiota in healthy adults: Temporal analysis reveals individual and common core and relation to intestinal symptoms
    • Jalanka-Tuovinen J, Salonen A, Nikkilä J, Immonen O, Kekkonen RA, et al. (2011) Intestinal microbiota in healthy adults: Temporal analysis reveals individual and common core and relation to intestinal symptoms Plos One 6: e23035.
    • (2011) Plos One , vol.6
    • Jalanka-Tuovinen, J.1    Salonen, A.2    Nikkilä, J.3    Immonen, O.4    Kekkonen, R.A.5
  • 21
    • 67649945513 scopus 로고    scopus 로고
    • Development and application of the human intestinal tract chip, a phylogenetic microarray: Analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults
    • Rajilić-Stojanović M, Heilig HGHJ, Molenaar D, Kajander K, Surakka A, et al. (2009) Development and application of the human intestinal tract chip, a phylogenetic microarray: Analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults. Environ Microbiol 11: 1736-1751.
    • (2009) Environ Microbiol , vol.11 , pp. 1736-1751
    • Rajilić-Stojanović, M.1    Heilig, H.G.H.J.2    Molenaar, D.3    Kajander, K.4    Surakka, A.5
  • 22
    • 0037316303 scopus 로고    scopus 로고
    • A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    • DOI 10.1093/bioinformatics/19.2.185
    • Bolstad BM, Irizarry RA, Åstrand M, Speed TP (2003) A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 19: 185-193. (Pubitemid 36181903)
    • (2003) Bioinformatics , vol.19 , Issue.2 , pp. 185-193
    • Bolstad, B.M.1    Irizarry, R.A.2    Astrand, M.3    Speed, T.P.4
  • 23
    • 77956061782 scopus 로고    scopus 로고
    • Advanced approaches to characterize the human intestinal microbiota by computational meta-analysis
    • Nikkilä J, de Vos WM (2010) Advanced approaches to characterize the human intestinal microbiota by computational meta-analysis. J Clin Gastroenterol 44: S2-S5.
    • (2010) J Clin Gastroenterol , vol.44
    • Nikkilä, J.1    De Vos, W.M.2
  • 24
    • 84856061103 scopus 로고    scopus 로고
    • The currently used commercial DNA-extraction methods give different results of clostridial and actinobacterial populations derived from human fecal samples
    • Maukonen J, Simoes C, Saarela M (2012) The currently used commercial DNA-extraction methods give different results of clostridial and actinobacterial populations derived from human fecal samples. FEMS Microbiol Ecol 79: 697-708.
    • (2012) FEMS Microbiol Ecol , vol.79 , pp. 697-708
    • Maukonen, J.1    Simoes, C.2    Saarela, M.3
  • 26
    • 79952709519 scopus 로고    scopus 로고
    • pROC: An open-source package for R and S plus to analyze and compare ROC curves
    • Robin X, Turck N, Hainard A, Tiberti N, Lisacek F, et al. (2011) pROC: An open-source package for R and S plus to analyze and compare ROC curves. BMC Bioinformatics 12: 77.
    • (2011) BMC Bioinformatics , vol.12 , pp. 77
    • Robin, X.1    Turck, N.2    Hainard, A.3    Tiberti, N.4    Lisacek, F.5
  • 27
    • 84872969494 scopus 로고    scopus 로고
    • Gut microbiome composition is linked to whole grain-induced immunological improvements
    • Martínez I, Lattimer JM, Hubach KL, Case JA, Yang J, et al. (2012) Gut microbiome composition is linked to whole grain-induced immunological improvements. The ISME Journal 7: 269-280.
    • (2012) The ISME Journal , vol.7 , pp. 269-280
    • Martínez, I.1    Lattimer, J.M.2    Hubach, K.L.3    Case, J.A.4    Yang, J.5
  • 28
    • 84878709716 scopus 로고    scopus 로고
    • Gut metagenome in european women with normal, impaired and diabetic glucose control
    • Karlsson FH, Tremaroli V, Nookaew I, Bergström G, Behre CJ, et al. (2013) Gut metagenome in european women with normal, impaired and diabetic glucose control. Nature 498: 99-103.
    • (2013) Nature , vol.498 , pp. 99-103
    • Karlsson, F.H.1    Tremaroli, V.2    Nookaew, I.3    Bergström, G.4    Behre, C.J.5
  • 29
    • 84867074831 scopus 로고    scopus 로고
    • A metagenome-wide association study of gut microbiota in type 2 diabetes
    • Qin J, Li Y, Cai Z, Li S, Zhu J, et al. (2012) A metagenome-wide association study of gut microbiota in type 2 diabetes. Nature 490: 55-60.
    • (2012) Nature , vol.490 , pp. 55-60
    • Qin, J.1    Li, Y.2    Cai, Z.3    Li, S.4    Zhu, J.5
  • 30
    • 84863105536 scopus 로고    scopus 로고
    • Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease
    • Papa E, Docktor M, Smillie C, Weber S, Preheim SP, et al (2012) Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease. Plos One 7: e39242.
    • (2012) Plos One , vol.7
    • Papa, E.1    Docktor, M.2    Smillie, C.3    Weber, S.4    Preheim, S.P.5
  • 31
    • 44349169373 scopus 로고    scopus 로고
    • Adipose gene expression prior to weight loss can differentiate and weakly predict dietary responders
    • Mutch DM, Temanni MR, Henegar C, Combes F, Pelloux V, et al. (2007) Adipose gene expression prior to weight loss can differentiate and weakly predict dietary responders. Plos One 2: e1344.
    • (2007) Plos One , vol.2
    • Mutch, D.M.1    Temanni, M.R.2    Henegar, C.3    Combes, F.4    Pelloux, V.5
  • 33
    • 84877116806 scopus 로고    scopus 로고
    • Associations between the human intestinal microbiota, lactobacillus rhamnosus GG and serum lipids indicated by integrated analysis of high-throughput profiling data
    • Lahti L, Salonen A, Kekkonen RA, Salojärvi J, Jalanka-Tuovinen J, et al. (2013) Associations between the human intestinal microbiota, lactobacillus rhamnosus GG and serum lipids indicated by integrated analysis of high-throughput profiling data. PeerJ 1: e32.
    • (2013) PeerJ , vol.1
    • Lahti, L.1    Salonen, A.2    Kekkonen, R.A.3    Salojärvi, J.4    Jalanka-Tuovinen, J.5
  • 35
    • 0016167941 scopus 로고
    • Human fecal flora: The normal flora of 20 japanese-hawaiians
    • Moore W, Holdeman LV (1974) Human fecal flora: The normal flora of 20 japanese-hawaiians. Appl Microbiol 27: 961-979.
    • (1974) Appl Microbiol , vol.27 , pp. 961-979
    • Moore, W.1    Holdeman, L.V.2
  • 36
    • 1642277665 scopus 로고    scopus 로고
    • Restricted Distribution of the Butyrate Kinase Pathway among Butyrate-Producing Bacteria from the Human Colon
    • DOI 10.1128/JB.186.7.2099-2106.2004
    • Louis P, Duncan SH, McCrae SI, Millar J, Jackson MS, et al. (2004) Restricted distribution of the butyrate kinase pathway among butyrate-producing bacteria from the human colon. J Bacteriol 186: 2099-2106. (Pubitemid 38381199)
    • (2004) Journal of Bacteriology , vol.186 , Issue.7 , pp. 2099-2106
    • Louis, P.1    Duncan, S.H.2    McCrae, S.I.3    Millar, J.4    Jackson, M.S.5    Flint, H.J.6
  • 37
    • 78649658138 scopus 로고    scopus 로고
    • Genus I. Clostridium
    • De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, et al, editors. Springer
    • Rainey FA, Hollen BJ, Small A (2009) Genus I. clostridium. In: De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, et al, editors. Bergey's manual of systematic bacteriology. Springer. pp. 774-781.
    • (2009) Bergey's Manual of Systematic Bacteriology , pp. 774-781
    • Rainey, F.A.1    Hollen, B.J.2    Small, A.3
  • 38
  • 40
    • 84883057637 scopus 로고    scopus 로고
    • Dietary intervention impact on gut microbial gene richness
    • Cotillard A, Kennedy SP, Kong LC, Prifti E, Pons N, et al. (2013) Dietary intervention impact on gut microbial gene richness. Nature 500: 585-858.
    • (2013) Nature , vol.500 , pp. 585-858
    • Cotillard, A.1    Kennedy, S.P.2    Kong, L.C.3    Prifti, E.4    Pons, N.5
  • 41
    • 1142281888 scopus 로고    scopus 로고
    • Species response curves along environmental gradients. A case study from SE Norwegian swamp forests
    • Rydgren K, Økland RH, Økland T (2003) Species response curves along environmental gradients. A case study from SE norwegian swamp forests. Journal of Vegetation Science 14: 869-880. (Pubitemid 38204025)
    • (2003) Journal of Vegetation Science , vol.14 , Issue.6 , pp. 869-880
    • Rydgren, K.1    Okland, R.H.2    Okland, T.3
  • 42
    • 78649520016 scopus 로고    scopus 로고
    • A dose dependent impact of prebiotic galactooligosaccharides on the intestinal microbiota of healthy adults
    • Davis L, Martínez I, Walter J, Hutkins R (2010) A dose dependent impact of prebiotic galactooligosaccharides on the intestinal microbiota of healthy adults. Int J Food Microbiol 144: 285-292.
    • (2010) Int J Food Microbiol , vol.144 , pp. 285-292
    • Davis, L.1    Martínez, I.2    Walter, J.3    Hutkins, R.4
  • 43
    • 34948828520 scopus 로고    scopus 로고
    • A double-blind placebo-controlled study to establish the bifidogenic dose of inulin in healthy humans
    • DOI 10.1038/sj.ejcn.1602636, PII 1602636
    • Kolida S, Meyer D, Gibson G (2007) A double-blind placebo-controlled study to establish the bifidogenic dose of inulin in healthy humans. Eur J Clin Nutr 61: 1189-1195. (Pubitemid 47521550)
    • (2007) European Journal of Clinical Nutrition , vol.61 , Issue.10 , pp. 1189-1195
    • Kolida, S.1    Meyer, D.2    Gibson, G.R.3
  • 44
    • 16544392539 scopus 로고    scopus 로고
    • The capacity of nondigestible carbohydrates to stimulate fecal bifidobacteria in healthy humans: A double-blind, randomized, placebo-controlled, parallel-group, dose-response relation study
    • Bouhnik Y, Raskine L, Simoneau G, Vicaut E, Neut C, et al. (2004) The capacity of nondigestible carbohydrates to stimulate fecal bifidobacteria in healthy humans: A double-blind, randomized, placebo-controlled, parallelgroup, dose-response relation study. Am J Clin Nutr 80: 1658-1664. (Pubitemid 41103868)
    • (2004) American Journal of Clinical Nutrition , vol.80 , Issue.6 , pp. 1658-1664
    • Bouhnik, Y.1    Raskine, L.2    Simoneau, G.3    Vicaut, E.4    Neut, C.5    Flourie, B.6    Brouns, F.7    Bornet, F.R.8
  • 45
    • 78649734540 scopus 로고    scopus 로고
    • Resistant starches types 2 and 4 have differential effects on the composition of the fecal microbiota in human subjects
    • Martinez I, Kim J, Duffy PR, Schlegel VL, Walter J (2010) Resistant starches types 2 and 4 have differential effects on the composition of the fecal microbiota in human subjects. PLoS One 5: e15046.
    • (2010) PLoS One , vol.5
    • Martinez, I.1    Kim, J.2    Duffy, P.R.3    Schlegel, V.L.4    Walter, J.5
  • 46
    • 0031897543 scopus 로고    scopus 로고
    • Biological response modifier activity of Lactococcus lactis 332
    • Maeda M, Ueda H, Yamazaki M, Ohtsuka M, Doi U (1998) Biological response modifier activity of lactococcus lactis 332. Yakugaku Zasshi-Journal of the Pharmaceutical Society of Japan 118: 150-157. (Pubitemid 28182569)
    • (1998) Yakugaku Zasshi , vol.118 , Issue.4 , pp. 150-157
    • Maeda, M.1    Ueda, H.2    Yamazaki, M.3    Ohtsuka, M.4    Doi, U.5
  • 47
    • 84875370244 scopus 로고    scopus 로고
    • Microbiota conservation and BMI signatures in adult monozygotic twins
    • Tims S, Derom C, Jonkers DM, Vlietinck R, Saris WH, et al. (2013) Microbiota conservation and BMI signatures in adult monozygotic twins. The ISME Journal 7: 707-717.
    • (2013) The ISME Journal , vol.7 , pp. 707-717
    • Tims, S.1    Derom, C.2    Jonkers, D.M.3    Vlietinck, R.4    Saris, W.H.5
  • 49
    • 44849119441 scopus 로고    scopus 로고
    • A survey of Clostridia in the patients with acute diarrhea compared with the control group
    • Moosavian M, Hayati K (2008) A survey of clostridia in the patients with acute diarrhea compared with the control group. Pakistan Journal of Medical Sciences 24: 209-212. (Pubitemid 351798599)
    • (2008) Pakistan Journal of Medical Sciences , vol.24 , Issue.2 , pp. 209-212
    • Moosavian, M.1    Hayati, K.2
  • 50
    • 77952233830 scopus 로고    scopus 로고
    • The probiotic properties of lactobacillus buchneri P2
    • Zeng XQ, Pan DD, Guo YX (2010) The probiotic properties of lactobacillus buchneri P2. J Appl Microbiol 108: 2059-2066.
    • (2010) J Appl Microbiol , vol.108 , pp. 2059-2066
    • Zeng, X.Q.1    Pan, D.D.2    Guo, Y.X.3
  • 51
    • 84857874680 scopus 로고    scopus 로고
    • Application of novel PCR-based methods for detection, quantitation, and phylogenetic characterization of sutterella species in intestinal biopsy samples from children with autism and gastrointestinal disturbances
    • Williams BL, Hornig M, Parekh T, Lipkin WI (2012) Application of novel PCR-based methods for detection, quantitation, and phylogenetic characterization of sutterella species in intestinal biopsy samples from children with autism and gastrointestinal disturbances. Mbio 3: e00261.
    • (2012) Mbio , vol.3
    • Williams, B.L.1    Hornig, M.2    Parekh, T.3    Lipkin, W.I.4


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