메뉴 건너뛰기




Volumn 390, Issue 1, 2014, Pages 80-92

Maternal bias and escape from X chromosome imprinting in the midgestation mouse placenta

Author keywords

Imprinting; Parent of origin bias; Placenta; RNA sequencing; X inactivation

Indexed keywords

RNA;

EID: 84897575650     PISSN: 00121606     EISSN: 1095564X     Source Type: Journal    
DOI: 10.1016/j.ydbio.2014.02.020     Document Type: Article
Times cited : (26)

References (39)
  • 1
    • 77958471357 scopus 로고    scopus 로고
    • Differential expression analysis for sequence count data
    • Anders S., Huber W. Differential expression analysis for sequence count data. Genome Biol. 2010, 11:R106.
    • (2010) Genome Biol. , vol.11
    • Anders, S.1    Huber, W.2
  • 3
    • 0021145377 scopus 로고
    • Role of paternal and maternal genomes in mouse development
    • Barton S.C., Surani M.A., Norris M.L. Role of paternal and maternal genomes in mouse development. Nature 1984, 311:374-376.
    • (1984) Nature , vol.311 , pp. 374-376
    • Barton, S.C.1    Surani, M.A.2    Norris, M.L.3
  • 6
    • 0025961771 scopus 로고
    • A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome
    • Brown C., Ballabio A., Rupert J., Lafreniere R., Grompe M., Tonlorenzi R., Willard H. A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome. Nature 1991, 349:38-44.
    • (1991) Nature , vol.349 , pp. 38-44
    • Brown, C.1    Ballabio, A.2    Rupert, J.3    Lafreniere, R.4    Grompe, M.5    Tonlorenzi, R.6    Willard, H.7
  • 7
    • 84874663519 scopus 로고    scopus 로고
    • Endogenous retroviruses function as species-specific enhancer elements in the placenta
    • Chuong E.B., Rumi M.A.K., Soares M.J., Baker J.C. Endogenous retroviruses function as species-specific enhancer elements in the placenta. Nat. Genet. 2013, 45:325-329.
    • (2013) Nat. Genet. , vol.45 , pp. 325-329
    • Chuong, E.B.1    Rumi, M.A.K.2    Soares, M.J.3    Baker, J.C.4
  • 8
    • 33745495413 scopus 로고    scopus 로고
    • Nutritional influences on implantation and placental development
    • Cross J.C., Mickelson L. Nutritional influences on implantation and placental development. Nutr. Rev. 2006, 64:S12-S18.
    • (2006) Nutr. Rev. , vol.64
    • Cross, J.C.1    Mickelson, L.2
  • 9
    • 84859256941 scopus 로고    scopus 로고
    • Critical evaluation of imprinted gene expression by RNA-Seq: a new perspective
    • DeVeale B., Kooy D., Babak T. Critical evaluation of imprinted gene expression by RNA-Seq: a new perspective. PLoS Genet. 2012, 8:e1002600.
    • (2012) PLoS Genet. , vol.8
    • DeVeale, B.1    Kooy, D.2    Babak, T.3
  • 11
    • 77955285002 scopus 로고    scopus 로고
    • Sex-specific parent-of-origin allelic expression in the mouse brain
    • Gregg C., Zhang J., Butler J.E., Haig D., Dulac C. Sex-specific parent-of-origin allelic expression in the mouse brain. Science 2010, 329:682-685.
    • (2010) Science , vol.329 , pp. 682-685
    • Gregg, C.1    Zhang, J.2    Butler, J.E.3    Haig, D.4    Dulac, C.5
  • 12
    • 77955299096 scopus 로고    scopus 로고
    • High-resolution analysis of parent-of-origin allelic expression in the mouse brain
    • Gregg C., Zhang J., Weissbourd B., Luo S., Schroth G.P., Haig D., Dulac C. High-resolution analysis of parent-of-origin allelic expression in the mouse brain. Science 2010, 329:643-648.
    • (2010) Science , vol.329 , pp. 643-648
    • Gregg, C.1    Zhang, J.2    Weissbourd, B.3    Luo, S.4    Schroth, G.P.5    Haig, D.6    Dulac, C.7
  • 13
    • 0020005114 scopus 로고
    • Preferential paternal X inactivation in extraembryonic tissues of early mouse embryos
    • Harper M., Fosten M., Monk M. Preferential paternal X inactivation in extraembryonic tissues of early mouse embryos. J. Embryol. Exp. Morphol. 1982, 67:127-135.
    • (1982) J. Embryol. Exp. Morphol. , vol.67 , pp. 127-135
    • Harper, M.1    Fosten, M.2    Monk, M.3
  • 14
    • 77950363751 scopus 로고    scopus 로고
    • Development and function of trophoblast giant cells in the rodent placenta
    • Hu D., Cross J.C. Development and function of trophoblast giant cells in the rodent placenta. Int. J. Dev. Biol. 2010, 341-354.
    • (2010) Int. J. Dev. Biol. , pp. 341-354
    • Hu, D.1    Cross, J.C.2
  • 16
    • 0347357614 scopus 로고    scopus 로고
    • Inheritance of a pre-inactivated paternal X chromosome in early mouse embryos
    • Huynh K.D., Lee J.T. Inheritance of a pre-inactivated paternal X chromosome in early mouse embryos. Nature 2003, 426:857-862.
    • (2003) Nature , vol.426 , pp. 857-862
    • Huynh, K.D.1    Lee, J.T.2
  • 18
    • 58149174384 scopus 로고    scopus 로고
    • A sensitive functional assay reveals frequent loss of genomic imprinting in human placenta
    • Lambertini L., Diplas A.I., Lee M., Sperling R., Chen J., Wetmur J.G. A sensitive functional assay reveals frequent loss of genomic imprinting in human placenta. Epigenetics 2008, 3:261-269.
    • (2008) Epigenetics , vol.3 , pp. 261-269
    • Lambertini, L.1    Diplas, A.I.2    Lee, M.3    Sperling, R.4    Chen, J.5    Wetmur, J.G.6
  • 19
    • 9644266664 scopus 로고    scopus 로고
    • Imprinting on distal chromosome 7 in the placenta involves repressive histone methylation independent of DNA methylation
    • Lewis A., Mitsuya K., Umlauf D., Smith P., Dean W., Walter J., Higgins M., Feil R., Reik W. Imprinting on distal chromosome 7 in the placenta involves repressive histone methylation independent of DNA methylation. Nat. Genet. 2004, 36:1291-1295.
    • (2004) Nat. Genet. , vol.36 , pp. 1291-1295
    • Lewis, A.1    Mitsuya, K.2    Umlauf, D.3    Smith, P.4    Dean, W.5    Walter, J.6    Higgins, M.7    Feil, R.8    Reik, W.9
  • 20
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li H., Durbin R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 2009, 25:1754-1760.
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 21
    • 7144223296 scopus 로고
    • Gene action in the X-chromosome of the mouse (Mus musculus L.)
    • Lyon M.F. Gene action in the X-chromosome of the mouse (Mus musculus L.). Nature 1961, 190:372-373.
    • (1961) Nature , vol.190 , pp. 372-373
    • Lyon, M.F.1
  • 22
    • 0018719004 scopus 로고
    • Sequential X chromosome inactivation coupled with cellular differentiation in early mouse embryos
    • Monk M., Harper M. Sequential X chromosome inactivation coupled with cellular differentiation in early mouse embryos. Nature 1979, 281:311-313.
    • (1979) Nature , vol.281 , pp. 311-313
    • Monk, M.1    Harper, M.2
  • 26
    • 77954630809 scopus 로고    scopus 로고
    • Distinct histone modifications in stem cell lines and tissue lineages from the early mouse embryo
    • Rugg-Gunn P.J., Cox B.J., Ralston A., Rossant J. Distinct histone modifications in stem cell lines and tissue lineages from the early mouse embryo. Proc. Natl. Acad. Sci. USA 2010, 107:10783-10790.
    • (2010) Proc. Natl. Acad. Sci. USA , vol.107 , pp. 10783-10790
    • Rugg-Gunn, P.J.1    Cox, B.J.2    Ralston, A.3    Rossant, J.4
  • 28
    • 0017877927 scopus 로고
    • Complementation studies with mouse translocations
    • Searle A.G., Beechey C.V. Complementation studies with mouse translocations. Cytogenet. Genome Res. 1978, 20:282-303.
    • (1978) Cytogenet. Genome Res. , vol.20 , pp. 282-303
    • Searle, A.G.1    Beechey, C.V.2
  • 29
    • 0021067190 scopus 로고
    • Development of gynogenetic eggs in the mouse; implications for parthenogenetic embryos
    • Surani M.A., Barton S.C. Development of gynogenetic eggs in the mouse; implications for parthenogenetic embryos. Science 1983, 222:1034-1036.
    • (1983) Science , vol.222 , pp. 1034-1036
    • Surani, M.A.1    Barton, S.C.2
  • 30
    • 0021237658 scopus 로고
    • Development of reconstituted mouse eggs suggests imprinting of the genome during gametogenesis
    • Surani M.A., Barton S.C., Norris M.L. Development of reconstituted mouse eggs suggests imprinting of the genome during gametogenesis. Nature 1984, 308:548-550.
    • (1984) Nature , vol.308 , pp. 548-550
    • Surani, M.A.1    Barton, S.C.2    Norris, M.L.3
  • 31
    • 0016692463 scopus 로고
    • Preferential inactivation of the paternally derived X chromosome in the extraembryonic membranes of the mouse
    • Takagi N., Sasaki M. Preferential inactivation of the paternally derived X chromosome in the extraembryonic membranes of the mouse. Nature 1975, 256:640-642.
    • (1975) Nature , vol.256 , pp. 640-642
    • Takagi, N.1    Sasaki, M.2
  • 32
    • 33846226977 scopus 로고    scopus 로고
    • Histone arginine methylation regulates pluripotency in the early mouse embryo
    • Torres-Padilla M., Parfitt D., Kouzarides T., Zernicka-Goetz M. Histone arginine methylation regulates pluripotency in the early mouse embryo. Nature 2007, 445:214-218.
    • (2007) Nature , vol.445 , pp. 214-218
    • Torres-Padilla, M.1    Parfitt, D.2    Kouzarides, T.3    Zernicka-Goetz, M.4
  • 33
    • 9644281546 scopus 로고    scopus 로고
    • Imprinting along the Kcnq1 domain on mouse chromosome 7 involves repressive histone methylation and recruitment of Polycomb group complexes
    • Umlauf D., Goto Y., Cao R., Cerqueira F., Wagschal A., Zhang Y., Feil R. Imprinting along the Kcnq1 domain on mouse chromosome 7 involves repressive histone methylation and recruitment of Polycomb group complexes. Nat. Genet. 2004, 36:1296-1300.
    • (2004) Nat. Genet. , vol.36 , pp. 1296-1300
    • Umlauf, D.1    Goto, Y.2    Cao, R.3    Cerqueira, F.4    Wagschal, A.5    Zhang, Y.6    Feil, R.7
  • 35
    • 80052681300 scopus 로고    scopus 로고
    • A survey for novel imprinted genes in the mouse placenta by mRNA-seq
    • Wang X., Soloway P.D., Clark A.G. A survey for novel imprinted genes in the mouse placenta by mRNA-seq. Genetics 2011, 189:109-122.
    • (2011) Genetics , vol.189 , pp. 109-122
    • Wang, X.1    Soloway, P.D.2    Clark, A.G.3
  • 36
    • 57349168544 scopus 로고    scopus 로고
    • Transcriptome-wide identification of novel imprinted genes in neonatal mouse brain
    • Wang X., Sun Q., McGrath S.D., Mardis E.R., Soloway P.D., Clark A.G. Transcriptome-wide identification of novel imprinted genes in neonatal mouse brain. PLoS One 2008, 3:e3839.
    • (2008) PLoS One , vol.3
    • Wang, X.1    Sun, Q.2    McGrath, S.D.3    Mardis, E.R.4    Soloway, P.D.5    Clark, A.G.6
  • 37
    • 0017670346 scopus 로고
    • Preferential expression of the maternally derived X chromosome in the mouse yolk sac
    • West J., Frels W., Chapman V., Papaioannou V. Preferential expression of the maternally derived X chromosome in the mouse yolk sac. Cell 1977, 12:873-882.
    • (1977) Cell , vol.12 , pp. 873-882
    • West, J.1    Frels, W.2    Chapman, V.3    Papaioannou, V.4
  • 38
    • 84867337106 scopus 로고    scopus 로고
    • Next-generation sequencing of experimental mouse strains
    • Yalcin B., Adams D., Flint J., Keane T. Next-generation sequencing of experimental mouse strains. Mamm. Genome 2012, 23:490-498.
    • (2012) Mamm. Genome , vol.23 , pp. 490-498
    • Yalcin, B.1    Adams, D.2    Flint, J.3    Keane, T.4
  • 39
    • 77951794067 scopus 로고    scopus 로고
    • Global survey of escape from X inactivation by RNA-sequencing in mouse
    • Yang F., Babak T., Shendure J., Disteche C. Global survey of escape from X inactivation by RNA-sequencing in mouse. Genome Res. 2010, 20(5):614-622.
    • (2010) Genome Res. , vol.20 , Issue.5 , pp. 614-622
    • Yang, F.1    Babak, T.2    Shendure, J.3    Disteche, C.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.