-
1
-
-
0031543851
-
Importance of genetic variation to the viability of mammalian populations
-
Lacy R.C. Importance of genetic variation to the viability of mammalian populations. J. Mammal. 1997, 78:320-335. 10.2307/1382885.
-
(1997)
J. Mammal.
, vol.78
, pp. 320-335
-
-
Lacy, R.C.1
-
2
-
-
0037329527
-
Correlation between fitness and genetic diversity
-
Reed D.H., Frankham R. Correlation between fitness and genetic diversity. Conserv. Biol. 2003, 17:230-237. 10.1046/j.1523-1739.2003.01236.x.
-
(2003)
Conserv. Biol.
, vol.17
, pp. 230-237
-
-
Reed, D.H.1
Frankham, R.2
-
3
-
-
27744606052
-
The importance of immune gene variability (MHC) in evolutionary ecology and conservation
-
Sommer S. The importance of immune gene variability (MHC) in evolutionary ecology and conservation. Front. Zool. 2005, 2:16. 10.1186/1742-9994-2-16.
-
(2005)
Front. Zool.
, vol.2
, pp. 16
-
-
Sommer, S.1
-
4
-
-
80052185781
-
Major histocompatibility complex (MHC) markers in conservation biology
-
Ujvari B., Belov K. Major histocompatibility complex (MHC) markers in conservation biology. Int. J. Mol. Sci. 2011, 12:5168-5186. 10.3390/ijms12085168.
-
(2011)
Int. J. Mol. Sci.
, vol.12
, pp. 5168-5186
-
-
Ujvari, B.1
Belov, K.2
-
5
-
-
84911927871
-
Using genomics to characterize evolutionary potential for conservation of wild populations
-
Harrisson K.A., Pavlova A., Telonis-Scott M., Sunnucks P. Using genomics to characterize evolutionary potential for conservation of wild populations. Evol. Appl. 2014, 10.1111/eva.12149.
-
(2014)
Evol. Appl.
-
-
Harrisson, K.A.1
Pavlova, A.2
Telonis-Scott, M.3
Sunnucks, P.4
-
6
-
-
33644998297
-
The evolutionary ecology of the major histocompatibility complex
-
Piertney S.B., Oliver M.K. The evolutionary ecology of the major histocompatibility complex. Hered. (Edinb) 2006, 96:7-21. 10.1038/sj.hdy.6800724.
-
(2006)
Hered. (Edinb)
, vol.96
, pp. 7-21
-
-
Piertney, S.B.1
Oliver, M.K.2
-
7
-
-
77950816077
-
How pathogens drive genetic diversity: MHC, mechanisms and misunderstandings
-
Spurgin L.G., Richardson D.S. How pathogens drive genetic diversity: MHC, mechanisms and misunderstandings. Proc. R. Soc. B Biol. Sci. 2010, 277:979-988. 10.1098/rspb.2009.2084.
-
(2010)
Proc. R. Soc. B Biol. Sci.
, vol.277
, pp. 979-988
-
-
Spurgin, L.G.1
Richardson, D.S.2
-
8
-
-
0003732734
-
-
Garland Publishing, New York, USA
-
Janeway C.A., Travers P., Walport M., Shlomchik M.J. Immunobiology: the Immune System in Health and Disease 2001, Garland Publishing, New York, USA. fifth ed.
-
(2001)
Immunobiology: the Immune System in Health and Disease
-
-
Janeway, C.A.1
Travers, P.2
Walport, M.3
Shlomchik, M.J.4
-
9
-
-
84888006031
-
Major Histocompatibility Complex (MHC)
-
Penn D.J. Major Histocompatibility Complex (MHC). Encycl. Life Sci. 2002, 1-7.
-
(2002)
Encycl. Life Sci.
, pp. 1-7
-
-
Penn, D.J.1
-
10
-
-
0034097731
-
Nonlinkage of major histocompatibility complex class I and class II loci in bony fishes
-
Sato A., Figueroa F., Murray B.W., Málaga-Trillo E., Zaleska-Rutczynska Z., Sültmann H., et al. Nonlinkage of major histocompatibility complex class I and class II loci in bony fishes. Immunogenetics 2000, 51:108-116. 10.1007/s002510050019.
-
(2000)
Immunogenetics
, vol.51
, pp. 108-116
-
-
Sato, A.1
Figueroa, F.2
Murray, B.W.3
Málaga-Trillo, E.4
Zaleska-Rutczynska, Z.5
Sültmann, H.6
-
11
-
-
0036380364
-
Evidence that the separation of Mhc class II from class I loci in the zebrafish, Danio rerio, occurred by translocation
-
Kuroda N., Figueroa F., O'hUigin C., Klein J. Evidence that the separation of Mhc class II from class I loci in the zebrafish, Danio rerio, occurred by translocation. Immunogenetics 2002, 54:418-430. 10.1007/s00251-002-0473-5.
-
(2002)
Immunogenetics
, vol.54
, pp. 418-430
-
-
Kuroda, N.1
Figueroa, F.2
O'hUigin, C.3
Klein, J.4
-
12
-
-
0037884727
-
MHC studies in nonmodel vertebrates: what have we learned about natural selection in 15 years?
-
Bernatchez L., Landry C. MHC studies in nonmodel vertebrates: what have we learned about natural selection in 15 years?. J. Evol. Biol. 2003, 16:363-377.
-
(2003)
J. Evol. Biol.
, vol.16
, pp. 363-377
-
-
Bernatchez, L.1
Landry, C.2
-
13
-
-
78650053759
-
Major histocompatibility complex polymorphism: dynamics and consequences of parasite-mediated local adaptation in fishes
-
Eizaguirre C., Lenz T.L. Major histocompatibility complex polymorphism: dynamics and consequences of parasite-mediated local adaptation in fishes. J. Fish. Biol. 2010, 77:2023-2047. 10.1111/j.1095-8649.2010.02819.x.
-
(2010)
J. Fish. Biol.
, vol.77
, pp. 2023-2047
-
-
Eizaguirre, C.1
Lenz, T.L.2
-
14
-
-
79960605619
-
Computational prediction of MHC II-antigen binding supports divergent allele advantage and explains trans-species polymorphism
-
Lenz T.L. Computational prediction of MHC II-antigen binding supports divergent allele advantage and explains trans-species polymorphism. Evol. (N Y) 2011, 65:2380-2390. 10.1111/j.1558-5646.2011.01288.x.
-
(2011)
Evol. (N Y)
, vol.65
, pp. 2380-2390
-
-
Lenz, T.L.1
-
15
-
-
0016806140
-
Biological role for major histocompatibility antigens
-
Doherty P.C., Zinkernagel R.M. Biological role for major histocompatibility antigens. Lancet 1975, 1:1406-1409.
-
(1975)
Lancet
, vol.1
, pp. 1406-1409
-
-
Doherty, P.C.1
Zinkernagel, R.M.2
-
17
-
-
0032437308
-
Molecular trans-species polymorphism
-
Klein J., Sato A., Nagl S., O'hUigin C. Molecular trans-species polymorphism. Annu. Rev. Ecol. Syst. 1998, 29:1-21. 10.1146/annurev.ecolsys.29.1.1.
-
(1998)
Annu. Rev. Ecol. Syst.
, vol.29
, pp. 1-21
-
-
Klein, J.1
Sato, A.2
Nagl, S.3
O'hUigin, C.4
-
18
-
-
78649319665
-
Selection, trans-species polymorphism, and locus identification of major histocompatibility complex class II beta alleles of New World ranid frogs
-
Kiemnec-Tyburczy K.M., Richmond J.Q., Savage A.E., Zamudio K.R. Selection, trans-species polymorphism, and locus identification of major histocompatibility complex class II beta alleles of New World ranid frogs. Immunogenetics 2010, 62:741-751. 10.1007/s00251-010-0476-6.
-
(2010)
Immunogenetics
, vol.62
, pp. 741-751
-
-
Kiemnec-Tyburczy, K.M.1
Richmond, J.Q.2
Savage, A.E.3
Zamudio, K.R.4
-
19
-
-
67349151780
-
Trans-species polymorphism of the Mhc class II DRB-like gene in banded penguins (genus Spheniscus)
-
Kikkawa E.F., Tsuda T.T., Sumiyama D., Naruse T.K., Fukuda M., Kurita M., et al. Trans-species polymorphism of the Mhc class II DRB-like gene in banded penguins (genus Spheniscus). Immunogenetics 2009, 61:341-352. 10.1007/s00251-009-0363-1.
-
(2009)
Immunogenetics
, vol.61
, pp. 341-352
-
-
Kikkawa, E.F.1
Tsuda, T.T.2
Sumiyama, D.3
Naruse, T.K.4
Fukuda, M.5
Kurita, M.6
-
20
-
-
7044226335
-
Evolution and trans-species polymorphism of MHC class IIbeta genes in cyprinid fish
-
Ottová E., Simková A., Martin J.-F., de Bellocq J.G., Gelnar M., Allienne J.-F., et al. Evolution and trans-species polymorphism of MHC class IIbeta genes in cyprinid fish. Fish. Shellfish Immunol. 2005, 18:199-222. 10.1016/j.fsi.2004.07.004.
-
(2005)
Fish. Shellfish Immunol.
, vol.18
, pp. 199-222
-
-
Ottová, E.1
Simková, A.2
Martin, J.-F.3
de Bellocq, J.G.4
Gelnar, M.5
Allienne, J.-F.6
-
21
-
-
0030791307
-
Evolution by the birth-and-death process in multigene families of the vertebrate immune system
-
Nei M., Gu X., Sitnikova T. Evolution by the birth-and-death process in multigene families of the vertebrate immune system. Proc. Natl. Acad. Sci. 1997, 94:7799-7806. 10.1073/pnas.94.15.7799.
-
(1997)
Proc. Natl. Acad. Sci.
, vol.94
, pp. 7799-7806
-
-
Nei, M.1
Gu, X.2
Sitnikova, T.3
-
22
-
-
5344228334
-
Recent duplication and inter-locus gene conversion in major histocompatibility class II genes in a teleost, the three-spined stickleback
-
Reusch T.B.H., Schaschl H., Wegner K.M. Recent duplication and inter-locus gene conversion in major histocompatibility class II genes in a teleost, the three-spined stickleback. Immunogenetics 2004, 56:427-437. 10.1007/s00251-004-0704-z.
-
(2004)
Immunogenetics
, vol.56
, pp. 427-437
-
-
Reusch, T.B.H.1
Schaschl, H.2
Wegner, K.M.3
-
23
-
-
80052606169
-
The genome sequence of Atlantic cod reveals a unique immune system
-
Star B., Nederbragt A.J., Jentoft S., Grimholt U., Malmstrøm M., Gregers T.F., et al. The genome sequence of Atlantic cod reveals a unique immune system. Nature 2011, 477:207-210. 10.1038/nature10342.
-
(2011)
Nature
, vol.477
, pp. 207-210
-
-
Star, B.1
Nederbragt, A.J.2
Jentoft, S.3
Grimholt, U.4
Malmstrøm, M.5
Gregers, T.F.6
-
24
-
-
79955717061
-
The impact of sex-role reversal on the diversity of the major histocompatibility complex: insights from the seahorse (Hippocampus abdominalis)
-
Bahr A., Wilson A.B. The impact of sex-role reversal on the diversity of the major histocompatibility complex: insights from the seahorse (Hippocampus abdominalis). BMC Evol. Biol. 2011, 11:121. 10.1186/1471-2148-11-121.
-
(2011)
BMC Evol. Biol.
, vol.11
, pp. 121
-
-
Bahr, A.1
Wilson, A.B.2
-
25
-
-
2642671130
-
Linkage relationships and haplotype polymorphism among cichlid Mhc class II B loci
-
Málaga-Trillo E., Zaleska-Rutczynska Z., McAndrew B., Vincek V., Figueroa F., Sültmann H., et al. Linkage relationships and haplotype polymorphism among cichlid Mhc class II B loci. Genetics 1998, 149:1527-1537.
-
(1998)
Genetics
, vol.149
, pp. 1527-1537
-
-
Málaga-Trillo, E.1
Zaleska-Rutczynska, Z.2
McAndrew, B.3
Vincek, V.4
Figueroa, F.5
Sültmann, H.6
-
26
-
-
57649174607
-
Historical and contemporary selection of teleost MHC genes: did we leave the past behind?
-
Wegner K.M. Historical and contemporary selection of teleost MHC genes: did we leave the past behind?. J. Fish. Biol. 2008, 73:2110-2132. 10.1111/j.1095-8649.2008.02051.x.
-
(2008)
J. Fish. Biol.
, vol.73
, pp. 2110-2132
-
-
Wegner, K.M.1
-
27
-
-
26244452940
-
Inter- and intralocus recombination drive MHC class IIB gene diversification in a teleost, the three-spined stickleback Gasterosteus aculeatus
-
Reusch T.B.H., Langefors A. Inter- and intralocus recombination drive MHC class IIB gene diversification in a teleost, the three-spined stickleback Gasterosteus aculeatus. J. Mol. Evol. 2005, 61:531-541. 10.1007/s00239-004-0340-0.
-
(2005)
J. Mol. Evol.
, vol.61
, pp. 531-541
-
-
Reusch, T.B.H.1
Langefors, A.2
-
28
-
-
82955249064
-
Gene conversion rapidly generates major histocompatibility complex diversity in recently founded bird populations
-
Spurgin L.G., van Oosterhout C., Illera J.C., Bridgett S., Gharbi K., Emerson B.C., et al. Gene conversion rapidly generates major histocompatibility complex diversity in recently founded bird populations. Mol. Ecol. 2011, 20:5213-5225. 10.1111/j.1365-294X.2011.05367.x.
-
(2011)
Mol. Ecol.
, vol.20
, pp. 5213-5225
-
-
Spurgin, L.G.1
van Oosterhout, C.2
Illera, J.C.3
Bridgett, S.4
Gharbi, K.5
Emerson, B.C.6
-
29
-
-
84857800000
-
The evolution of MHC diversity: evidence of intralocus gene conversion and recombination in a single-locus system
-
Bahr A., Wilson A.B. The evolution of MHC diversity: evidence of intralocus gene conversion and recombination in a single-locus system. Gene 2012, 497:52-57. 10.1016/j.gene.2012.01.017.
-
(2012)
Gene
, vol.497
, pp. 52-57
-
-
Bahr, A.1
Wilson, A.B.2
-
30
-
-
33845416108
-
The major histocompatibility complex, sexual selection, and mate choice
-
Milinski M. The major histocompatibility complex, sexual selection, and mate choice. Annu. Rev. Ecol. Evol. Syst. 2006, 37:159-186. 10.1146/annurev.ecolsys.37.091305.110242.
-
(2006)
Annu. Rev. Ecol. Evol. Syst.
, vol.37
, pp. 159-186
-
-
Milinski, M.1
-
31
-
-
0036170875
-
The scent of genetic compatibility: sexual selection and the major histocompatibility complex
-
Penn D.J. The scent of genetic compatibility: sexual selection and the major histocompatibility complex. Ethology 2002, 108:1-21. 10.1046/j.1439-0310.2002.00768.x.
-
(2002)
Ethology
, vol.108
, pp. 1-21
-
-
Penn, D.J.1
-
32
-
-
34547890262
-
Influence of genetic dissimilarity in the reproductive success and mate choice of brown trout - females fishing for optimal MHC dissimilarity
-
Forsberg L.A., Dannewitz J., Petersson E., Grahn M. Influence of genetic dissimilarity in the reproductive success and mate choice of brown trout - females fishing for optimal MHC dissimilarity. J. Evol. Biol. 2007, 20:1859-1869. 10.1111/j.1420-9101.2007.01380.x.
-
(2007)
J. Evol. Biol.
, vol.20
, pp. 1859-1869
-
-
Forsberg, L.A.1
Dannewitz, J.2
Petersson, E.3
Grahn, M.4
-
33
-
-
72549089396
-
Disentangling the role of MHC-dependent "good genes" and "compatible genes" in mate-choice decisions of three-spined sticklebacks Gasterosteus aculeatus under semi-natural conditions
-
Lenz T.L., Eizaguirre C., Scharsack J.P., Kalbe M., Milinski M. Disentangling the role of MHC-dependent "good genes" and "compatible genes" in mate-choice decisions of three-spined sticklebacks Gasterosteus aculeatus under semi-natural conditions. J. Fish. Biol. 2009, 75:2122-2142. 10.1111/j.1095-8649.2009.02410.x.
-
(2009)
J. Fish. Biol.
, vol.75
, pp. 2122-2142
-
-
Lenz, T.L.1
Eizaguirre, C.2
Scharsack, J.P.3
Kalbe, M.4
Milinski, M.5
-
34
-
-
84862128391
-
Divergent selection on locally adapted major histocompatibility complex immune genes experimentally proven in the field
-
Eizaguirre C., Lenz T.L., Kalbe M., Milinski M. Divergent selection on locally adapted major histocompatibility complex immune genes experimentally proven in the field. Ecol. Lett. 2012, 15:723-731. 10.1111/j.1461-0248.2012.01791.x.
-
(2012)
Ecol. Lett.
, vol.15
, pp. 723-731
-
-
Eizaguirre, C.1
Lenz, T.L.2
Kalbe, M.3
Milinski, M.4
-
35
-
-
84905734003
-
Historical biogeography of a new antitropical clade of temperate freshwater fishes
-
Chen W.-J., Lavoué S., Beheregaray L.B., Mayden R.L. Historical biogeography of a new antitropical clade of temperate freshwater fishes. J. Biogeogr. 2014, 41:1806-1818. 10.1111/jbi.12333.
-
(2014)
J. Biogeogr.
, vol.41
, pp. 1806-1818
-
-
Chen, W.-J.1
Lavoué, S.2
Beheregaray, L.B.3
Mayden, R.L.4
-
36
-
-
0038685234
-
Patterns of abundance and habitat use by Nannoperca obscura (Yarra pygmy perch) and Nannoperca australis (Southern pygmy perch)
-
Woodward G.M.A., Malone B.S. Patterns of abundance and habitat use by Nannoperca obscura (Yarra pygmy perch) and Nannoperca australis (Southern pygmy perch). Proc. R. Soc. Vic. 2002, 114:61-72.
-
(2002)
Proc. R. Soc. Vic.
, vol.114
, pp. 61-72
-
-
Woodward, G.M.A.1
Malone, B.S.2
-
38
-
-
38549139480
-
Diurnal and nocturnal movements of river blackfish (Gadopsis marmoratus) in a south-eastern Australian upland stream
-
Koster W.M., Crook D a Diurnal and nocturnal movements of river blackfish (Gadopsis marmoratus) in a south-eastern Australian upland stream. Ecol. Freshw. Fish. 2008, 17:146-154. 10.1111/j.1600-0633.2007.00269.x.
-
(2008)
Ecol. Freshw. Fish.
, vol.17
, pp. 146-154
-
-
Koster, W.M.1
Crook, D.A.2
-
39
-
-
77952883707
-
Evolution and maintenance of divergent lineages in an endangered freshwater fish, Macquaria australasica
-
Faulks L.K., Gilligan D.M., Beheregaray L.B. Evolution and maintenance of divergent lineages in an endangered freshwater fish, Macquaria australasica. Conserv. Genet. 2010, 11:921-934. 10.1007/s10592-009-9936-7.
-
(2010)
Conserv. Genet.
, vol.11
, pp. 921-934
-
-
Faulks, L.K.1
Gilligan, D.M.2
Beheregaray, L.B.3
-
40
-
-
84897611502
-
A multigene molecular assessment of cryptic biodiversity in the iconic freshwater blackfishes (Teleostei: Percichthyidae: Gadopsis) of south-eastern Australia
-
Hammer M.P., Unmack P.J., Adams M., Raadik T.A., Johnson J.B. A multigene molecular assessment of cryptic biodiversity in the iconic freshwater blackfishes (Teleostei: Percichthyidae: Gadopsis) of south-eastern Australia. Biol. J. Linn. Soc. 2014, 111:521-540. 10.1111/bij.12222.
-
(2014)
Biol. J. Linn. Soc.
, vol.111
, pp. 521-540
-
-
Hammer, M.P.1
Unmack, P.J.2
Adams, M.3
Raadik, T.A.4
Johnson, J.B.5
-
41
-
-
10344236941
-
Mitochondrial 12S rRNA sequences support the existence of a third species of freshwater blackfish (Percicthyidae: Gadopsis) from south-eastern Australia
-
Miller A.D., Waggy G., Ryan S.G., Austin C.M. Mitochondrial 12S rRNA sequences support the existence of a third species of freshwater blackfish (Percicthyidae: Gadopsis) from south-eastern Australia. Mem. Mus. Vic. 2004, 61:121-127.
-
(2004)
Mem. Mus. Vic.
, vol.61
, pp. 121-127
-
-
Miller, A.D.1
Waggy, G.2
Ryan, S.G.3
Austin, C.M.4
-
42
-
-
0035729638
-
Phylogenetic relationships of Australian members of the family percichthyidae inferred from mitochondrial 12S rRNA sequence data
-
Jerry D.R., Elphinstone M.S., Baverstock P.R. Phylogenetic relationships of Australian members of the family percichthyidae inferred from mitochondrial 12S rRNA sequence data. Mol. Phylogenetic Evol. 2001, 18:335-347. 10.1006/mpev.2000.0871.
-
(2001)
Mol. Phylogenetic Evol.
, vol.18
, pp. 335-347
-
-
Jerry, D.R.1
Elphinstone, M.S.2
Baverstock, P.R.3
-
43
-
-
84892644951
-
Catchment-scale conservation units identified for the threatened Yarra pygmy perch (Nannoperca obscura) in highly modified river systems
-
Brauer C.J., Unmack P.J., Hammer M.P., Adams M., Beheregaray L.B. Catchment-scale conservation units identified for the threatened Yarra pygmy perch (Nannoperca obscura) in highly modified river systems. PLoS One 2013, 8:e82953. 10.1371/journal.pone.0082953.
-
(2013)
PLoS One
, vol.8
, pp. e82953
-
-
Brauer, C.J.1
Unmack, P.J.2
Hammer, M.P.3
Adams, M.4
Beheregaray, L.B.5
-
44
-
-
74749107830
-
Phylogeographic structure in the threatened Yarra pygmy perch Nannoperca obscura (Teleostei: Percichthyidae) has major implications for declining populations
-
Hammer M.P., Unmack P.J., Adams M., Johnson J.B., Walker K.F. Phylogeographic structure in the threatened Yarra pygmy perch Nannoperca obscura (Teleostei: Percichthyidae) has major implications for declining populations. Conserv. Genet. 2010, 11:213-223. 10.1007/s10592-009-0024-9.
-
(2010)
Conserv. Genet.
, vol.11
, pp. 213-223
-
-
Hammer, M.P.1
Unmack, P.J.2
Adams, M.3
Johnson, J.B.4
Walker, K.F.5
-
45
-
-
34249986634
-
Molecular genetic and stable isotope signatures reveal complementary patterns of population connectivity in the regionally vulnerable southern pygmy perch (Nannoperca australis)
-
Cook B.D., Bunn S.E., Hughes J.M. Molecular genetic and stable isotope signatures reveal complementary patterns of population connectivity in the regionally vulnerable southern pygmy perch (Nannoperca australis). Biol. Conserv. 2007, 138:60-72. 10.1016/j.biocon.2007.04.002.
-
(2007)
Biol. Conserv.
, vol.138
, pp. 60-72
-
-
Cook, B.D.1
Bunn, S.E.2
Hughes, J.M.3
-
46
-
-
79958807915
-
The role of anthropogenic vs. natural in-stream structures in determining connectivity and genetic diversity in an endangered freshwater fish, Macquarie perch (Macquaria australasica)
-
Faulks L.K., Gilligan D.M., Beheregaray L.B. The role of anthropogenic vs. natural in-stream structures in determining connectivity and genetic diversity in an endangered freshwater fish, Macquarie perch (Macquaria australasica). Evol. Appl. 2011, 4:589-601. 10.1111/j.1752-4571.2011.00183.x.
-
(2011)
Evol. Appl.
, vol.4
, pp. 589-601
-
-
Faulks, L.K.1
Gilligan, D.M.2
Beheregaray, L.B.3
-
47
-
-
0001590333
-
Some causes of the decline in range and abundance of native fish in the Murray-Darling river system
-
Cadwallader P.L. Some causes of the decline in range and abundance of native fish in the Murray-Darling river system. R. Soc. Vic. Proc. 1978, 90:211-224.
-
(1978)
R. Soc. Vic. Proc.
, vol.90
, pp. 211-224
-
-
Cadwallader, P.L.1
-
48
-
-
84883729636
-
Let's not forget the small fishes - conservation of two threatened species of pygmy perch in south-eastern Australia
-
Saddlier S., Koehn J.D., Hammer M.P. Let's not forget the small fishes - conservation of two threatened species of pygmy perch in south-eastern Australia. Mar. Freshw. Res. 2013, 64:874. 10.1071/MF12260.
-
(2013)
Mar. Freshw. Res.
, vol.64
, pp. 874
-
-
Saddlier, S.1
Koehn, J.D.2
Hammer, M.P.3
-
49
-
-
84938139968
-
"Ragged mountain ranges, droughts and flooding rains": the evolutionary history and conservation of Australian freshwater fishes
-
Cambridge University Press, Cambrigde, UK, A. Stow, G. Holwell (Eds.)
-
Faulks L.K., Gilligan D.M., Beheregaray L.B. "Ragged mountain ranges, droughts and flooding rains": the evolutionary history and conservation of Australian freshwater fishes. Austral Ark 2014, 492-511. Cambridge University Press, Cambrigde, UK. A. Stow, G. Holwell (Eds.).
-
(2014)
Austral Ark
, pp. 492-511
-
-
Faulks, L.K.1
Gilligan, D.M.2
Beheregaray, L.B.3
-
50
-
-
84883672119
-
A review of on-ground recovery actions for threatened freshwater fish in Australia
-
Lintermans M. A review of on-ground recovery actions for threatened freshwater fish in Australia. Mar. Freshw. Res. 2013, 64:775-791. 10.1071/mf12306.
-
(2013)
Mar. Freshw. Res.
, vol.64
, pp. 775-791
-
-
Lintermans, M.1
-
51
-
-
84883665308
-
Freshwater fish conservation in the face of critical water shortages in the southern Murray-Darling Basin, Australia
-
Hammer M.P., Bice C.M., Hall A., Frears A., Watt A., Whiterod N.S., et al. Freshwater fish conservation in the face of critical water shortages in the southern Murray-Darling Basin, Australia. Mar. Freshw. Res. 2013, 64:807-821. 10.1071/MF12258.
-
(2013)
Mar. Freshw. Res.
, vol.64
, pp. 807-821
-
-
Hammer, M.P.1
Bice, C.M.2
Hall, A.3
Frears, A.4
Watt, A.5
Whiterod, N.S.6
-
52
-
-
77949340359
-
Methods for MHC genotyping in non-model vertebrates
-
Babik W. Methods for MHC genotyping in non-model vertebrates. Mol. Ecol. Resour. 2010, 10:237-251. 10.1111/j.1755-0998.2009.02788.x.
-
(2010)
Mol. Ecol. Resour.
, vol.10
, pp. 237-251
-
-
Babik, W.1
-
53
-
-
84938139969
-
-
Conserv Biol Rev..
-
Attard C, Moller L, Sasaki M, Hammer MP, Bice C, Brauer C, et al. A novel holistic framework for genetic-based reintroduction programs. Conserv Biol Rev..
-
A novel holistic framework for genetic-based reintroduction programs.
-
-
Attard, C.1
Moller, L.2
Sasaki, M.3
Hammer, M.P.4
Bice, C.5
Brauer, C.6
-
54
-
-
0030022330
-
Numerous transposed sequences of mitochondrial cytochrome oxidase I-II in aphids of the genus Sitobion (Hemiptera: Aphididae)
-
Sunnucks P., Hales D.F. Numerous transposed sequences of mitochondrial cytochrome oxidase I-II in aphids of the genus Sitobion (Hemiptera: Aphididae). Mol. Biol. Evol. 1996, 13:510-524.
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 510-524
-
-
Sunnucks, P.1
Hales, D.F.2
-
55
-
-
63449087306
-
RSCA genotyping of MHC for high-throughput evolutionary studies in the model organism three-spined stickleback Gasterosteus aculeatus
-
Lenz T.L., Eizaguirre C., Becker S., Reusch T.B.H. RSCA genotyping of MHC for high-throughput evolutionary studies in the model organism three-spined stickleback Gasterosteus aculeatus. BMC Evol. Biol. 2009, 9:57. 10.1186/1471-2148-9-57.
-
(2009)
BMC Evol. Biol.
, vol.9
, pp. 57
-
-
Lenz, T.L.1
Eizaguirre, C.2
Becker, S.3
Reusch, T.B.H.4
-
56
-
-
0031848248
-
Evolution by gene duplication in the major histocompatibility complex
-
Klein J., Sato A., O'hUigin C. Evolution by gene duplication in the major histocompatibility complex. Cytogenet. Genome Res. 1998, 80:123-127. 10.1159/000014967.
-
(1998)
Cytogenet. Genome Res.
, vol.80
, pp. 123-127
-
-
Klein, J.1
Sato, A.2
O'hUigin, C.3
-
57
-
-
84902356894
-
Ultra-deep illumina sequencing accurately identifies MHC class IIb alleles and provides evidence for copy number variation in the guppy (Poecilia reticulata)
-
Lighten J., van Oosterhout C., Paterson I.G., McMullan M., Bentzen P. Ultra-deep illumina sequencing accurately identifies MHC class IIb alleles and provides evidence for copy number variation in the guppy (Poecilia reticulata). Mol. Ecol. Resour. 2014, 1-15. 10.1111/1755-0998.12225.
-
(2014)
Mol. Ecol. Resour.
, pp. 1-15
-
-
Lighten, J.1
van Oosterhout, C.2
Paterson, I.G.3
McMullan, M.4
Bentzen, P.5
-
58
-
-
65249087333
-
New generation sequencers as a tool for genotyping of highly polymorphic multilocus MHC system
-
Babik W., Taberlet P., Ejsmond M.J., Radwan J. New generation sequencers as a tool for genotyping of highly polymorphic multilocus MHC system. Mol. Ecol. Resour. 2009, 9:713-719. 10.1111/j.1755-0998.2009.02622.x.
-
(2009)
Mol. Ecol. Resour.
, vol.9
, pp. 713-719
-
-
Babik, W.1
Taberlet, P.2
Ejsmond, M.J.3
Radwan, J.4
-
59
-
-
77951973196
-
A 454 multiplex sequencing method for rapid and reliable genotyping of highly polymorphic genes in large-scale studies
-
Galan M., Guivier E., Caraux G., Charbonnel N., Cosson J.-F. A 454 multiplex sequencing method for rapid and reliable genotyping of highly polymorphic genes in large-scale studies. BMC Genomics 2010, 11:296. 10.1186/1471-2164-11-296.
-
(2010)
BMC Genomics
, vol.11
, pp. 296
-
-
Galan, M.1
Guivier, E.2
Caraux, G.3
Charbonnel, N.4
Cosson, J.-F.5
-
60
-
-
84881126426
-
MHC genotyping of non-model organisms using next-generation sequencing: a new methodology to deal with artefacts and allelic dropout
-
Sommer S., Courtiol A., Mazzoni C.J. MHC genotyping of non-model organisms using next-generation sequencing: a new methodology to deal with artefacts and allelic dropout. BMC Genomics 2013, 14:542. 10.1186/1471-2164-14-542.
-
(2013)
BMC Genomics
, vol.14
, pp. 542
-
-
Sommer, S.1
Courtiol, A.2
Mazzoni, C.J.3
-
61
-
-
84870866937
-
Comparison of 454 pyrosequencing methods for characterizing the major histocompatibility complex of nonmodel species and the advantages of ultra deep coverage
-
Oomen R a, Gillett R.M., Kyle C.J. Comparison of 454 pyrosequencing methods for characterizing the major histocompatibility complex of nonmodel species and the advantages of ultra deep coverage. Mol. Ecol. Resour. 2013, 13:103-116. 10.1111/1755-0998.12027.
-
(2013)
Mol. Ecol. Resour.
, vol.13
, pp. 103-116
-
-
Oomen, R.A.1
Gillett, R.M.2
Kyle, C.J.3
-
62
-
-
84856468953
-
NGS QC toolkit: a toolkit for quality control of next generation sequencing data
-
Patel R.K., Jain M. NGS QC toolkit: a toolkit for quality control of next generation sequencing data. PLoS One 2012, 7:e30619. 10.1371/journal.pone.0030619.
-
(2012)
PLoS One
, vol.7
, pp. e30619
-
-
Patel, R.K.1
Jain, M.2
-
63
-
-
79959281269
-
JMHC: software assistant for multilocus genotyping of gene families using next-generation amplicon sequencing
-
Stuglik M.T., Radwan J., Babik W. jMHC: software assistant for multilocus genotyping of gene families using next-generation amplicon sequencing. Mol. Ecol. Resour. 2011, 11:739-742. 10.1111/j.1755-0998.2011.02997.x.
-
(2011)
Mol. Ecol. Resour.
, vol.11
, pp. 739-742
-
-
Stuglik, M.T.1
Radwan, J.2
Babik, W.3
-
64
-
-
79961181125
-
UCHIME improves sensitivity and speed of chimera detection
-
Edgar R.C., Haas B.J., Clemente J.C., Quince C., Knight R. UCHIME improves sensitivity and speed of chimera detection. Bioinformatics 2011, 27:2194-2200. 10.1093/bioinformatics/btr381.
-
(2011)
Bioinformatics
, vol.27
, pp. 2194-2200
-
-
Edgar, R.C.1
Haas, B.J.2
Clemente, J.C.3
Quince, C.4
Knight, R.5
-
65
-
-
78650653530
-
454 sequencing reveals extreme complexity of the class II major histocompatibility complex in the collared flycatcher
-
Zagalska-Neubauer M., Babik W., Stuglik M., Gustafsson L., Cichoń M., Radwan J. 454 sequencing reveals extreme complexity of the class II major histocompatibility complex in the collared flycatcher. BMC Evol. Biol. 2010, 10:395. 10.1186/1471-2148-10-395.
-
(2010)
BMC Evol. Biol.
, vol.10
, pp. 395
-
-
Zagalska-Neubauer, M.1
Babik, W.2
Stuglik, M.3
Gustafsson, L.4
Cichoń, M.5
Radwan, J.6
-
66
-
-
0002051540
-
BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT
-
Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucleic Acids Symp. Ser. 1999, 41:95-98.
-
(1999)
Nucleic Acids Symp. Ser.
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
67
-
-
84890330527
-
MEGA6: molecular evolutionary genetics analysis version 6.0
-
Tamura K., Stecher G., Peterson D., Filipski A., Kumar S. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol. Biol. Evol. 2013, 30:2725-2729. 10.1093/molbev/mst197.
-
(2013)
Mol. Biol. Evol.
, vol.30
, pp. 2725-2729
-
-
Tamura, K.1
Stecher, G.2
Peterson, D.3
Filipski, A.4
Kumar, S.5
-
68
-
-
33645229840
-
Estimating diversifying selection and functional constraint in the presence of recombination
-
Wilson D.J., McVean G. Estimating diversifying selection and functional constraint in the presence of recombination. Genetics 2006, 172:1411-1425. 10.1534/genetics.105.044917.
-
(2006)
Genetics
, vol.172
, pp. 1411-1425
-
-
Wilson, D.J.1
McVean, G.2
-
69
-
-
0022211482
-
Statistical properties of the number of recombination events in the history of a sample of DNA sequences
-
Hudson R.R., Kaplan N.L. Statistical properties of the number of recombination events in the history of a sample of DNA sequences. Genetics 1985, 111:147-164.
-
(1985)
Genetics
, vol.111
, pp. 147-164
-
-
Hudson, R.R.1
Kaplan, N.L.2
-
70
-
-
65649117685
-
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
-
Librado P., Rozas J. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 2009, 25:1451-1452. 10.1093/bioinformatics/btp187.
-
(2009)
Bioinformatics
, vol.25
, pp. 1451-1452
-
-
Librado, P.1
Rozas, J.2
-
71
-
-
84860109324
-
MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space
-
Ronquist F., Teslenko M., van der Mark P., Ayres D.L., Darling A., Höhna S., et al. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst. Biol. 2012, 61:539-542. 10.1093/sysbio/sys029.
-
(2012)
Syst. Biol.
, vol.61
, pp. 539-542
-
-
Ronquist, F.1
Teslenko, M.2
van der Mark, P.3
Ayres, D.L.4
Darling, A.5
Höhna, S.6
-
72
-
-
30744470609
-
Application of phylogenetic networks in evolutionary studies
-
Huson D.H., Bryant D. Application of phylogenetic networks in evolutionary studies. Mol. Biol. Evol. 2006, 23:254-267. 10.1093/molbev/msj030.
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 254-267
-
-
Huson, D.H.1
Bryant, D.2
-
73
-
-
0027217789
-
Three-dimensional structure of the human class II histocompatibility antigen HLA-DR1
-
Brown J.H., Jardetzky T.S., Gorga J.C., Stern L.J., Urban R.G., Strominger J.L., et al. Three-dimensional structure of the human class II histocompatibility antigen HLA-DR1. Nature 1993, 364:33-39. 10.1038/364033a0.
-
(1993)
Nature
, vol.364
, pp. 33-39
-
-
Brown, J.H.1
Jardetzky, T.S.2
Gorga, J.C.3
Stern, L.J.4
Urban, R.G.5
Strominger, J.L.6
-
74
-
-
84880170535
-
Nonparallelism in MHCIIβ diversity accompanies nonparallelism in pathogen infection of lake whitefish (Coregonus clupeaformis) species pairs as revealed by next-generation sequencing
-
Pavey S.A., Sevellec M., Adam W., Normandeau E., Lamaze F.C., Gagnaire P.-A., et al. Nonparallelism in MHCIIβ diversity accompanies nonparallelism in pathogen infection of lake whitefish (Coregonus clupeaformis) species pairs as revealed by next-generation sequencing. Mol. Ecol. 2013, 22:3833-3849. 10.1111/mec.12358.
-
(2013)
Mol. Ecol.
, vol.22
, pp. 3833-3849
-
-
Pavey, S.A.1
Sevellec, M.2
Adam, W.3
Normandeau, E.4
Lamaze, F.C.5
Gagnaire, P.-A.6
-
75
-
-
77955258152
-
Sympatric and allopatric divergence of MHC genes in threespine stickleback
-
Matthews B., Harmon L.J., M'Gonigle L., Marchinko K.B., Schaschl H. Sympatric and allopatric divergence of MHC genes in threespine stickleback. PLoS One 2010, 5:e10948. 10.1371/journal.pone.0010948.
-
(2010)
PLoS One
, vol.5
, pp. e10948
-
-
Matthews, B.1
Harmon, L.J.2
M'Gonigle, L.3
Marchinko, K.B.4
Schaschl, H.5
-
76
-
-
0029877201
-
Sequence analysis of a polymorphic Mhc class II gene in Pacific salmon
-
Miller K.M., Withler R.E. Sequence analysis of a polymorphic Mhc class II gene in Pacific salmon. Immunogenetics 1996, 43:337-351. 10.1007/BF02199802.
-
(1996)
Immunogenetics
, vol.43
, pp. 337-351
-
-
Miller, K.M.1
Withler, R.E.2
-
77
-
-
0028448334
-
A study of variability in the MHC class II β1 and class I α2 domain exons of Atlantic salmon, Salmo salar L
-
Grimholt U., Olsaker I., Lindstrøm C de V., Lie Ø. A study of variability in the MHC class II β1 and class I α2 domain exons of Atlantic salmon, Salmo salar L. Anim. Genet. 1994, 25:147-153. 10.1111/j.1365-2052.1994.tb00103.x.
-
(1994)
Anim. Genet.
, vol.25
, pp. 147-153
-
-
Grimholt, U.1
Olsaker, I.2
Lindstrøm, C.V.3
Lie, Ø.4
-
78
-
-
0034970467
-
Sequence diversity of Mhc genes in lake whitefish
-
Binz T., Largiader C., Muller R., Wedekind C. Sequence diversity of Mhc genes in lake whitefish. J. Fish. Biol. 2001, 58:359-373. 10.1111/j.1095-8649.2001.tb02258.x.
-
(2001)
J. Fish. Biol.
, vol.58
, pp. 359-373
-
-
Binz, T.1
Largiader, C.2
Muller, R.3
Wedekind, C.4
-
79
-
-
77951499819
-
MHC genetic structure and divergence across populations of Chinook salmon (Oncorhynchus tshawytscha)
-
Evans M.L., Neff B.D., Heath D.D. MHC genetic structure and divergence across populations of Chinook salmon (Oncorhynchus tshawytscha). Hered. (Edinb) 2010, 104:449-459. 10.1038/hdy.2009.121.
-
(2010)
Hered. (Edinb)
, vol.104
, pp. 449-459
-
-
Evans, M.L.1
Neff, B.D.2
Heath, D.D.3
-
80
-
-
0034755842
-
Comparative analysis of population structure across environments and geographical scales at major histocompatibility complex and microsatellite loci in Atlantic salmon (Salmo salar)
-
Landry C., Bernatchez L. Comparative analysis of population structure across environments and geographical scales at major histocompatibility complex and microsatellite loci in Atlantic salmon (Salmo salar). Mol. Ecol. 2001, 10:2525-2539. 10.1046/j.1365-294X.2001.01383.x.
-
(2001)
Mol. Ecol.
, vol.10
, pp. 2525-2539
-
-
Landry, C.1
Bernatchez, L.2
-
81
-
-
0036807185
-
Pathogen resistance and genetic variation at MHC loci
-
Hedrick P.W. Pathogen resistance and genetic variation at MHC loci. Evol. (N Y) 2002, 56:1902-1908. 10.1554/0014-3820(2002)056[1902:PRAGVA]2.0.CO;2.
-
(2002)
Evol. (N Y)
, vol.56
, pp. 1902-1908
-
-
Hedrick, P.W.1
-
82
-
-
84899638125
-
Selection from parasites favours immunogenetic diversity but not divergence among locally adapted host populations
-
Tobler M., Plath M., Riesch R., Schlupp I., Grasse A., Munimanda G.K., et al. Selection from parasites favours immunogenetic diversity but not divergence among locally adapted host populations. J. Evol. Biol. 2014, 27:960-974. 10.1111/jeb.12370.
-
(2014)
J. Evol. Biol.
, vol.27
, pp. 960-974
-
-
Tobler, M.1
Plath, M.2
Riesch, R.3
Schlupp, I.4
Grasse, A.5
Munimanda, G.K.6
-
83
-
-
44649124807
-
The effect of landscape processes upon gene flow and genetic diversity in an Australian freshwater fish, Neosilurus hyrtlii
-
Huey J.A., Baker A.M., Hughes J.M. The effect of landscape processes upon gene flow and genetic diversity in an Australian freshwater fish, Neosilurus hyrtlii. Freshw. Biol. 2008, 53:1393-1408. 10.1111/j.1365-2427.2008.01971.x.
-
(2008)
Freshw. Biol.
, vol.53
, pp. 1393-1408
-
-
Huey, J.A.1
Baker, A.M.2
Hughes, J.M.3
-
84
-
-
78149427542
-
Islands of water in a sea of dry land: hydrological regime predicts genetic diversity and dispersal in a widespread fish from Australia's arid zone, the golden perch (Macquaria ambigua)
-
Faulks L.K., Gilligan D.M., Beheregaray L.B. Islands of water in a sea of dry land: hydrological regime predicts genetic diversity and dispersal in a widespread fish from Australia's arid zone, the golden perch (Macquaria ambigua). Mol. Ecol. 2010, 19:4723-4737. 10.1111/j.1365-294X.2010.04848.x.
-
(2010)
Mol. Ecol.
, vol.19
, pp. 4723-4737
-
-
Faulks, L.K.1
Gilligan, D.M.2
Beheregaray, L.B.3
-
85
-
-
70349563285
-
Diversity and evolution of MHII beta genes in a non-model percid species - the Eurasian perch (Perca fluviatilis L.)
-
Michel C., Bernatchez L., Behrmann-Godel J. Diversity and evolution of MHII beta genes in a non-model percid species - the Eurasian perch (Perca fluviatilis L.). Mol. Immunol. 2009, 46:3399-3410. 10.1016/j.molimm.2009.07.012.
-
(2009)
Mol. Immunol.
, vol.46
, pp. 3399-3410
-
-
Michel, C.1
Bernatchez, L.2
Behrmann-Godel, J.3
-
86
-
-
40349108566
-
MHC adaptive divergence between closely related and sympatric African cichlids
-
Blais J., Rico C., van Oosterhout C., Cable J., Turner G.F., Bernatchez L. MHC adaptive divergence between closely related and sympatric African cichlids. PLoS One 2007, 2:e734. 10.1371/journal.pone.0000734.
-
(2007)
PLoS One
, vol.2
, pp. e734
-
-
Blais, J.1
Rico, C.2
van Oosterhout, C.3
Cable, J.4
Turner, G.F.5
Bernatchez, L.6
-
87
-
-
34547700728
-
Patterns of historical balancing selection on the salmonid major histocompatibility complex class II beta gene
-
Aguilar A., Garza J.C. Patterns of historical balancing selection on the salmonid major histocompatibility complex class II beta gene. J. Mol. Evol. 2007, 65:34-43. 10.1007/s00239-006-0222-8.
-
(2007)
J. Mol. Evol.
, vol.65
, pp. 34-43
-
-
Aguilar, A.1
Garza, J.C.2
-
88
-
-
77957221786
-
Homozygosity at a class II MHC locus depresses female reproductive ability in European brown hares
-
Smith S., Mang T., De Bellocq J.G., Schaschl H., Zeitlhofer C., Hackländer K., et al. Homozygosity at a class II MHC locus depresses female reproductive ability in European brown hares. Mol. Ecol. 2010, 19:4131-4143. 10.1111/j.1365-294X.2010.04765.x.
-
(2010)
Mol. Ecol.
, vol.19
, pp. 4131-4143
-
-
Smith, S.1
Mang, T.2
De Bellocq, J.G.3
Schaschl, H.4
Zeitlhofer, C.5
Hackländer, K.6
|