-
1
-
-
37549030093
-
Adaptation from standing genetic variation
-
Barrett, R. D. H., and D. Schluter. 2008. Adaptation from standing genetic variation. Trends Ecol. Evol. 23:38-44. doi: 10.1016/j.tree.2007.09.008.
-
(2008)
Trends Ecol. Evol.
, vol.23
, pp. 38-44
-
-
Barrett, R.D.H.1
Schluter, D.2
-
3
-
-
84882626069
-
The phylogenetic interpretation of biological surveys
-
Bell, G. 2013. The phylogenetic interpretation of biological surveys. Oikos 122:1380-1392.
-
(2013)
Oikos
, vol.122
, pp. 1380-1392
-
-
Bell, G.1
-
4
-
-
44449161646
-
Rapid evolution of yeast centromeres in the absence of drive
-
Bensasson, D., M. Zarowiecki, A. Burt, and V. Koufopanou. 2008. Rapid evolution of yeast centromeres in the absence of drive. Genetics 178(4):2161-2167.
-
(2008)
Genetics
, vol.178
, Issue.4
, pp. 2161-2167
-
-
Bensasson, D.1
Zarowiecki, M.2
Burt, A.3
Koufopanou, V.4
-
5
-
-
45849093668
-
Historical contingency and the evolution of a key innovation in an experimental population of Escherichia coli
-
Blount, Z. D., C. Z. Borland, and R. E. Lenski. 2008. Historical contingency and the evolution of a key innovation in an experimental population of Escherichia coli. Proc. Natl Acad. Sci. USA 105:7899-7906.
-
(2008)
Proc. Natl Acad. Sci. USA
, vol.105
, pp. 7899-7906
-
-
Blount, Z.D.1
Borland, C.Z.2
Lenski, R.E.3
-
6
-
-
0020895377
-
Patterns of variation in the yeast florae of exudates in an oak community
-
Bowles, J. M., and M. A. Lachance. 1983. Patterns of variation in the yeast florae of exudates in an oak community. Can. J. Bot. 61:2984-2995.
-
(1983)
Can. J. Bot.
, vol.61
, pp. 2984-2995
-
-
Bowles, J.M.1
Lachance, M.A.2
-
7
-
-
79955158679
-
Evolutionary engineered Saccharomyces cerevisiae wine yeast strains with increased in vivo flux through the pentose phosphate pathway
-
Cadière, A., A. Ortiz-Julien, C. Camarasa, and S. Dequin. 2011. Evolutionary engineered Saccharomyces cerevisiae wine yeast strains with increased in vivo flux through the pentose phosphate pathway. Metab. Eng. 13:263-271.
-
(2011)
Metab. Eng.
, vol.13
, pp. 263-271
-
-
Cadière, A.1
Ortiz-Julien, A.2
Camarasa, C.3
Dequin, S.4
-
8
-
-
84906718090
-
Chromosomal variation segregates within incipient species and correlates with reproductive isolation
-
Charron, G., J.-B. Leducq, and C. R. Landry. 2014. Chromosomal variation segregates within incipient species and correlates with reproductive isolation. Mol. Ecol. 23:4362-4372.
-
(2014)
Mol. Ecol.
, vol.23
, pp. 4362-4372
-
-
Charron, G.1
Leducq, J.-B.2
Landry, C.R.3
-
9
-
-
12944262160
-
Resource competition and adaptive radiation in a microbial microcosm
-
Craig MacLean, R., A. Dickson, and G. Bell. 2005. Resource competition and adaptive radiation in a microbial microcosm. Ecol. Lett. 8:38-46.
-
(2005)
Ecol. Lett.
, vol.8
, pp. 38-46
-
-
Craig MacLean, R.1
Dickson, A.2
Bell, G.3
-
10
-
-
85027953323
-
Stability, genotypic and phenotypic diversity of Shewanella baltica in the redox transition zone of the Baltic Sea
-
Deng, J., I. Brettar, C. Luo, J. Auchtung, K. T. Konstantinidis, J. L. M. Rodrigues, et al. 2014. Stability, genotypic and phenotypic diversity of Shewanella baltica in the redox transition zone of the Baltic Sea. Environ. Microbiol. 16:1854-1866.
-
(2014)
Environ. Microbiol.
, vol.16
, pp. 1854-1866
-
-
Deng, J.1
Brettar, I.2
Luo, C.3
Auchtung, J.4
Konstantinidis, K.T.5
Rodrigues, J.L.M.6
-
11
-
-
0033794921
-
Evolutionary branching and sympatric speciation caused by different types of ecological interactions
-
Doebeli, M., and U. Dieckmann. 2000. Evolutionary branching and sympatric speciation caused by different types of ecological interactions. Am. Nat. 156(S4):S77-S101.
-
(2000)
Am. Nat.
, vol.156
, Issue.S4
, pp. S77-S101
-
-
Doebeli, M.1
Dieckmann, U.2
-
12
-
-
33644966287
-
Global carbon utilization profiles of wild-type, mutant, and transformant strains of Hypocrea jecorina
-
Druzhinina, I. S., M. Schmoll, B. Seiboth, and C. P. Kubicek. 2006. Global carbon utilization profiles of wild-type, mutant, and transformant strains of Hypocrea jecorina. Appl. Environ. Microbiol. 72:2126-2133.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 2126-2133
-
-
Druzhinina, I.S.1
Schmoll, M.2
Seiboth, B.3
Kubicek, C.P.4
-
13
-
-
0025919424
-
Classification and characterization of heterotrophic microbial communities on the basis of patterns of community-level sole-carbon-source utilization
-
Garland, J. L., and A. L. Mills. 1991. Classification and characterization of heterotrophic microbial communities on the basis of patterns of community-level sole-carbon-source utilization. Appl. Environ. Microbiol. 57:2351-2359.
-
(1991)
Appl. Environ. Microbiol.
, vol.57
, pp. 2351-2359
-
-
Garland, J.L.1
Mills, A.L.2
-
14
-
-
0031886729
-
Evolutionarily singular strategies and the adaptive growth and branching of the evolutionary tree
-
Geritz, S. A. H., E. Kisdi, G. Mesze NA, and J. A. J. Metz. 1998. Evolutionarily singular strategies and the adaptive growth and branching of the evolutionary tree. Evol. Ecol. 12:35-57.
-
(1998)
Evol. Ecol.
, vol.12
, pp. 35-57
-
-
Geritz, S.A.H.1
Kisdi, E.2
Mesze, N.A.G.3
Metz, J.A.J.4
-
15
-
-
84869392987
-
Phylogenetic constraints on ecosystem functioning
-
Gravel, D., T. Bell, C. Barbera, M. Combe, T. Pommier, and N. Mouquet. 2012. Phylogenetic constraints on ecosystem functioning. Nat. Commun. 3:1117.
-
(2012)
Nat. Commun.
, vol.3
, pp. 1117
-
-
Gravel, D.1
Bell, T.2
Barbera, C.3
Combe, M.4
Pommier, T.5
Mouquet, N.6
-
16
-
-
77955972009
-
An integrative approach to understanding microbial diversity: from intracellular mechanisms to community structure
-
Gudelj, I., J. S. Weitz, T. Ferenci, M. Claire Horner-Devine, C. J. Marx, J. R. Meyer, et al. 2010. An integrative approach to understanding microbial diversity: from intracellular mechanisms to community structure. Ecol. Lett. 13:1073-1084.
-
(2010)
Ecol. Lett.
, vol.13
, pp. 1073-1084
-
-
Gudelj, I.1
Weitz, J.S.2
Ferenci, T.3
Claire Horner-Devine, M.4
Marx, C.5
Meyer, J.R.6
-
17
-
-
67650627521
-
Genetic and metabolic biodiversity of Trichoderma from Colombia and adjacent neotropic regions
-
Hoyos-Carvajal, L., S. Orduz, and J. Bissett. 2009. Genetic and metabolic biodiversity of Trichoderma from Colombia and adjacent neotropic regions. Fungal Genet. Biol. 46:615-631.
-
(2009)
Fungal Genet. Biol.
, vol.46
, pp. 615-631
-
-
Hoyos-Carvajal, L.1
Orduz, S.2
Bissett, J.3
-
18
-
-
84878462125
-
Mixing of vineyard and oak-tree ecotypes of Saccharomyces cerevisiae in North American vineyards
-
Hyma, K. E., and J. C. Fay. 2013. Mixing of vineyard and oak-tree ecotypes of Saccharomyces cerevisiae in North American vineyards. Mol. Ecol. 22:2917-2930.
-
(2013)
Mol. Ecol.
, vol.22
, pp. 2917-2930
-
-
Hyma, K.E.1
Fay, J.C.2
-
19
-
-
1642334798
-
Population genetics of the wild yeast Saccharomyces paradoxus
-
Johnson, L. J., V. Koufopanou, M. R. Goddard, R. Hetherington, S. M. Schäfer, and A. Burt. 2004. Population genetics of the wild yeast Saccharomyces paradoxus. Genetics 166:43-52.
-
(2004)
Genetics
, vol.166
, pp. 43-52
-
-
Johnson, L.J.1
Koufopanou, V.2
Goddard, M.R.3
Hetherington, R.4
Schäfer, S.M.5
Burt, A.6
-
20
-
-
84865866440
-
Experimental evolution
-
Kawecki, T. J., R. E. Lenski, D. Ebert, B. Hollis, I. Olivieri, and M. C. Whitlock. 2012. Experimental evolution. Trends Ecol. Evol. 27:547-560.
-
(2012)
Trends Ecol. Evol.
, vol.27
, pp. 547-560
-
-
Kawecki, T.J.1
Lenski, R.E.2
Ebert, D.3
Hollis, B.4
Olivieri, I.5
Whitlock, M.C.6
-
21
-
-
0031920135
-
The use of carbon substrate utilization patterns in environmental and ecological microbiology
-
Konopka, A., L. Oliver, and R. F. Turco Jr. 1998. The use of carbon substrate utilization patterns in environmental and ecological microbiology. Microb. Ecol. 35:103-115.
-
(1998)
Microb. Ecol.
, vol.35
, pp. 103-115
-
-
Konopka, A.1
Oliver, L.2
Turco, R.F.3
-
22
-
-
33751235592
-
The spatial scale of genetic differentiation in a model organism: the wild yeast Saccharomyces paradoxus
-
Koufopanou, V., J. Hughes, G. Bell, and A. Burt. 2006. The spatial scale of genetic differentiation in a model organism: the wild yeast Saccharomyces paradoxus. Philos. Trans. R. Soc. Lond. B Biol. Sci. 361:1941-1946.
-
(2006)
Philos. Trans. R. Soc. Lond. B Biol. Sci.
, vol.361
, pp. 1941-1946
-
-
Koufopanou, V.1
Hughes, J.2
Bell, G.3
Burt, A.4
-
23
-
-
0347926115
-
Genetic and metabolic diversity of Trichoderma: a case study on South-East Asian isolates
-
Kubicek, C. P., J. Bissett, I. Druzhinina, C. Kullnig-Gradinger, and G. Szakacs. 2003. Genetic and metabolic diversity of Trichoderma: a case study on South-East Asian isolates. Fungal Genet. Biol. 38:310-319.
-
(2003)
Fungal Genet. Biol.
, vol.38
, pp. 310-319
-
-
Kubicek, C.P.1
Bissett, J.2
Druzhinina, I.3
Kullnig-Gradinger, C.4
Szakacs, G.5
-
24
-
-
84891866767
-
Local climatic adaptation in a widespread microorganism
-
Leducq, J.-B., G. Charron, P. Samani, A. K. Dubé, K. Sylvester, B. James, et al. 2014. Local climatic adaptation in a widespread microorganism. Proc. Biol. Sci. 281:20132472.
-
(2014)
Proc. Biol. Sci.
, vol.281
, pp. 20132472
-
-
Leducq, J.-B.1
Charron, G.2
Samani, P.3
Dubé, A.K.4
Sylvester, K.5
James, B.6
-
25
-
-
77955765927
-
Comparison of the Mantel test and alternative approaches for detecting complex multivariate relationships in the spatial analysis of genetic data
-
Legendre, P., and M.-J. Fortin. 2010. Comparison of the Mantel test and alternative approaches for detecting complex multivariate relationships in the spatial analysis of genetic data. Mol. Ecol. Resour. 10:831-844.
-
(2010)
Mol. Ecol. Resour.
, vol.10
, pp. 831-844
-
-
Legendre, P.1
Fortin, M.-J.2
-
26
-
-
62649089109
-
Population genomics of domestic and wild yeasts
-
Liti, G., D. M. Carter, A. M. Moses, J. Warringer, L. Parts, S. A. James, et al. 2009. Population genomics of domestic and wild yeasts. Nature 458:337-341.
-
(2009)
Nature
, vol.458
, pp. 337-341
-
-
Liti, G.1
Carter, D.M.2
Moses, A.M.3
Warringer, J.4
Parts, L.5
James, S.A.6
-
27
-
-
0020069233
-
Pentose phosphate pathway mutants of yeast
-
Lobo, Z., and P. K. Maitra. 1982. Pentose phosphate pathway mutants of yeast. Mol. Gen. Genet. 185:367-368.
-
(1982)
Mol. Gen. Genet.
, vol.185
, pp. 367-368
-
-
Lobo, Z.1
Maitra, P.K.2
-
28
-
-
84864432664
-
Widespread disruptive selection in the wild is associated with intense resource competition
-
Martin, R. A., and D. W. Pfennig. 2012. Widespread disruptive selection in the wild is associated with intense resource competition. BMC Evol. Biol. 12:136.
-
(2012)
BMC Evol. Biol.
, vol.12
, pp. 136
-
-
Martin, R.A.1
Pfennig, D.W.2
-
29
-
-
80051502271
-
Evaluation of the Biolog MicroStation system for yeast identification
-
McGinnis, M. R., T. C. Molina, D. L. Pierson, and S. K. Mishra. 1996. Evaluation of the Biolog MicroStation system for yeast identification. J. Med. Vet. Mycol. 34:349-352.
-
(1996)
J. Med. Vet. Mycol.
, vol.34
, pp. 349-352
-
-
McGinnis, M.R.1
Molina, T.C.2
Pierson, D.L.3
Mishra, S.K.4
-
30
-
-
0032216373
-
Saccharomyces paradoxus and S. cerevisiae are associated with exudates of North America n oaks
-
Naumov, G. I., E. S. Naumova, and P. D. Sniegowski. 1998. Saccharomyces paradoxus and S. cerevisiae are associated with exudates of North America n oaks. Can. J. Microbiol. 44:1045-1050.
-
(1998)
Can. J. Microbiol.
, vol.44
, pp. 1045-1050
-
-
Naumov, G.I.1
Naumova, E.S.2
Sniegowski, P.D.3
-
31
-
-
0032919364
-
KEGG: Kyoto Encyclopedia of Genes and Genomes
-
Ogata, H., S. Goto, K. Sato, W. Fujibuchi, H. Bono, and M. Kanehisa. 1999. KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res. 27:29-34.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 29-34
-
-
Ogata, H.1
Goto, S.2
Sato, K.3
Fujibuchi, W.4
Bono, H.5
Kanehisa, M.6
-
32
-
-
84872250100
-
Coevolution trumps pleiotropy: carbon assimilation traits are independent of metabolic network structure in budding yeast
-
Opulente, D. A., C. M. Morales, L. B. Carey, and J. S. Rest. 2013. Coevolution trumps pleiotropy: carbon assimilation traits are independent of metabolic network structure in budding yeast. PLoS ONE 8:e54403.
-
(2013)
PLoS ONE
, vol.8
, pp. e54403
-
-
Opulente, D.A.1
Morales, C.M.2
Carey, L.B.3
Rest, J.S.4
-
33
-
-
0020924469
-
The effect of body size on animal abundance
-
Peters, R. H., and K. Wassenberg. 1983. The effect of body size on animal abundance. Oecologia 60:89-96.
-
(1983)
Oecologia
, vol.60
, pp. 89-96
-
-
Peters, R.H.1
Wassenberg, K.2
-
34
-
-
0030910201
-
Evaluation of the Biolog system for the identification of food and beverage yeasts
-
Praphailong, W., M. Van Gestel, G. H. Fleet, and G. M. Heard. 1997. Evaluation of the Biolog system for the identification of food and beverage yeasts. Lett. Appl. Microbiol. 24:455-459.
-
(1997)
Lett. Appl. Microbiol.
, vol.24
, pp. 455-459
-
-
Praphailong, W.1
Van Gestel, M.2
Fleet, G.H.3
Heard, G.M.4
-
35
-
-
84863304598
-
-
R Foundation for Statistical Computing, Vienna, Austria.
-
R Development Core Team. 2009. R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria.
-
(2009)
R: A Language and Environment for Statistical Computing
-
-
-
36
-
-
62649126517
-
Comprehensive polymorphism survey elucidates population structure of Saccharomyces cerevisiae
-
Schacherer, J., J. A Shapiro, D. M. Ruderfer, and L. Kruglyak. 2009. Comprehensive polymorphism survey elucidates population structure of Saccharomyces cerevisiae. Nature 458:342-345.
-
(2009)
Nature
, vol.458
, pp. 342-345
-
-
Schacherer, J.1
Shapiro, J.A.2
Ruderfer, D.M.3
Kruglyak, L.4
-
37
-
-
0028119736
-
The Ecology and Genetics of Fitness in Forest Plants. IV. Quantitative Genetics of Fitness Components in Impatiens pallida (Balsaminaceae)
-
Schoen, D. J., G. Bell, and M. J. Lechowicz. 1994. The Ecology and Genetics of Fitness in Forest Plants. IV. Quantitative Genetics of Fitness Components in Impatiens pallida (Balsaminaceae). Am. J. Bot. 81:232-239.
-
(1994)
Am. J. Bot.
, vol.81
, pp. 232-239
-
-
Schoen, D.J.1
Bell, G.2
Lechowicz, M.J.3
-
38
-
-
0036224204
-
Saccharomyces cerevisiae and Saccharomyces paradoxus coexist in a natural woodland site in north Ammerica and display different levels of reproductive isolation from European conspecifics
-
Sniegowski, P., P. Dombrowski, and E. Fingerman. 2002. Saccharomyces cerevisiae and Saccharomyces paradoxus coexist in a natural woodland site in north Ammerica and display different levels of reproductive isolation from European conspecifics. FEMS Yeast Res. 1:299-306.
-
(2002)
FEMS Yeast Res.
, vol.1
, pp. 299-306
-
-
Sniegowski, P.1
Dombrowski, P.2
Fingerman, E.3
-
39
-
-
42449128411
-
Population genomics of the wild yeast Saccharomyces paradoxus: quantifying the life cycle
-
Tsai, I. J., D. Bensasson, A. Burt, and V. Koufopanou. 2008. Population genomics of the wild yeast Saccharomyces paradoxus: quantifying the life cycle. Proc. Natl. Acad. Sci. U.S.A. 105:4957-4962.
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 4957-4962
-
-
Tsai, I.J.1
Bensasson, D.2
Burt, A.3
Koufopanou, V.4
-
40
-
-
79959847334
-
Trait variation in yeast is defined by population history
-
Warringer, J., E. Zörgö, F. A. Cubillos, A. Zia, A. Gjuvsland, J. T. Simpson, et al. 2011. Trait variation in yeast is defined by population history. PLoS Genet. 7:e1002111.
-
(2011)
PLoS Genet.
, vol.7
, pp. e1002111
-
-
Warringer, J.1
Zörgö, E.2
Cubillos, F.A.3
Zia, A.4
Gjuvsland, A.5
Simpson, J.6
-
41
-
-
0030061030
-
Trade-offs in parasitology, evolution and behavior
-
Zuk, M., M. J. Bryant, G. R. Kolluru, and V. Mirmovitch. 1996. Trade-offs in parasitology, evolution and behavior. Parasitol. Today 12:46-47.
-
(1996)
Parasitol. Today
, vol.12
, pp. 46-47
-
-
Zuk, M.1
Bryant, M.J.2
Kolluru, G.R.3
Mirmovitch, V.4
|