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Volumn 5, Issue 3, 2015, Pages 722-732

Metabolic variation in natural populations of wild yeast

Author keywords

Saccharomyces paradoxus; Ecological diversification; Evolution; Genetic variation; Metabolic trade offs; Microbial metabolic diversity

Indexed keywords

SACCHAROMYCES PARADOXUS; SACCHAROMYCETALES;

EID: 84937943669     PISSN: None     EISSN: 20457758     Source Type: Journal    
DOI: 10.1002/ece3.1376     Document Type: Article
Times cited : (11)

References (41)
  • 1
    • 37549030093 scopus 로고    scopus 로고
    • Adaptation from standing genetic variation
    • Barrett, R. D. H., and D. Schluter. 2008. Adaptation from standing genetic variation. Trends Ecol. Evol. 23:38-44. doi: 10.1016/j.tree.2007.09.008.
    • (2008) Trends Ecol. Evol. , vol.23 , pp. 38-44
    • Barrett, R.D.H.1    Schluter, D.2
  • 3
    • 84882626069 scopus 로고    scopus 로고
    • The phylogenetic interpretation of biological surveys
    • Bell, G. 2013. The phylogenetic interpretation of biological surveys. Oikos 122:1380-1392.
    • (2013) Oikos , vol.122 , pp. 1380-1392
    • Bell, G.1
  • 4
    • 44449161646 scopus 로고    scopus 로고
    • Rapid evolution of yeast centromeres in the absence of drive
    • Bensasson, D., M. Zarowiecki, A. Burt, and V. Koufopanou. 2008. Rapid evolution of yeast centromeres in the absence of drive. Genetics 178(4):2161-2167.
    • (2008) Genetics , vol.178 , Issue.4 , pp. 2161-2167
    • Bensasson, D.1    Zarowiecki, M.2    Burt, A.3    Koufopanou, V.4
  • 5
    • 45849093668 scopus 로고    scopus 로고
    • Historical contingency and the evolution of a key innovation in an experimental population of Escherichia coli
    • Blount, Z. D., C. Z. Borland, and R. E. Lenski. 2008. Historical contingency and the evolution of a key innovation in an experimental population of Escherichia coli. Proc. Natl Acad. Sci. USA 105:7899-7906.
    • (2008) Proc. Natl Acad. Sci. USA , vol.105 , pp. 7899-7906
    • Blount, Z.D.1    Borland, C.Z.2    Lenski, R.E.3
  • 6
    • 0020895377 scopus 로고
    • Patterns of variation in the yeast florae of exudates in an oak community
    • Bowles, J. M., and M. A. Lachance. 1983. Patterns of variation in the yeast florae of exudates in an oak community. Can. J. Bot. 61:2984-2995.
    • (1983) Can. J. Bot. , vol.61 , pp. 2984-2995
    • Bowles, J.M.1    Lachance, M.A.2
  • 7
    • 79955158679 scopus 로고    scopus 로고
    • Evolutionary engineered Saccharomyces cerevisiae wine yeast strains with increased in vivo flux through the pentose phosphate pathway
    • Cadière, A., A. Ortiz-Julien, C. Camarasa, and S. Dequin. 2011. Evolutionary engineered Saccharomyces cerevisiae wine yeast strains with increased in vivo flux through the pentose phosphate pathway. Metab. Eng. 13:263-271.
    • (2011) Metab. Eng. , vol.13 , pp. 263-271
    • Cadière, A.1    Ortiz-Julien, A.2    Camarasa, C.3    Dequin, S.4
  • 8
    • 84906718090 scopus 로고    scopus 로고
    • Chromosomal variation segregates within incipient species and correlates with reproductive isolation
    • Charron, G., J.-B. Leducq, and C. R. Landry. 2014. Chromosomal variation segregates within incipient species and correlates with reproductive isolation. Mol. Ecol. 23:4362-4372.
    • (2014) Mol. Ecol. , vol.23 , pp. 4362-4372
    • Charron, G.1    Leducq, J.-B.2    Landry, C.R.3
  • 9
    • 12944262160 scopus 로고    scopus 로고
    • Resource competition and adaptive radiation in a microbial microcosm
    • Craig MacLean, R., A. Dickson, and G. Bell. 2005. Resource competition and adaptive radiation in a microbial microcosm. Ecol. Lett. 8:38-46.
    • (2005) Ecol. Lett. , vol.8 , pp. 38-46
    • Craig MacLean, R.1    Dickson, A.2    Bell, G.3
  • 10
    • 85027953323 scopus 로고    scopus 로고
    • Stability, genotypic and phenotypic diversity of Shewanella baltica in the redox transition zone of the Baltic Sea
    • Deng, J., I. Brettar, C. Luo, J. Auchtung, K. T. Konstantinidis, J. L. M. Rodrigues, et al. 2014. Stability, genotypic and phenotypic diversity of Shewanella baltica in the redox transition zone of the Baltic Sea. Environ. Microbiol. 16:1854-1866.
    • (2014) Environ. Microbiol. , vol.16 , pp. 1854-1866
    • Deng, J.1    Brettar, I.2    Luo, C.3    Auchtung, J.4    Konstantinidis, K.T.5    Rodrigues, J.L.M.6
  • 11
    • 0033794921 scopus 로고    scopus 로고
    • Evolutionary branching and sympatric speciation caused by different types of ecological interactions
    • Doebeli, M., and U. Dieckmann. 2000. Evolutionary branching and sympatric speciation caused by different types of ecological interactions. Am. Nat. 156(S4):S77-S101.
    • (2000) Am. Nat. , vol.156 , Issue.S4 , pp. S77-S101
    • Doebeli, M.1    Dieckmann, U.2
  • 12
    • 33644966287 scopus 로고    scopus 로고
    • Global carbon utilization profiles of wild-type, mutant, and transformant strains of Hypocrea jecorina
    • Druzhinina, I. S., M. Schmoll, B. Seiboth, and C. P. Kubicek. 2006. Global carbon utilization profiles of wild-type, mutant, and transformant strains of Hypocrea jecorina. Appl. Environ. Microbiol. 72:2126-2133.
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 2126-2133
    • Druzhinina, I.S.1    Schmoll, M.2    Seiboth, B.3    Kubicek, C.P.4
  • 13
    • 0025919424 scopus 로고
    • Classification and characterization of heterotrophic microbial communities on the basis of patterns of community-level sole-carbon-source utilization
    • Garland, J. L., and A. L. Mills. 1991. Classification and characterization of heterotrophic microbial communities on the basis of patterns of community-level sole-carbon-source utilization. Appl. Environ. Microbiol. 57:2351-2359.
    • (1991) Appl. Environ. Microbiol. , vol.57 , pp. 2351-2359
    • Garland, J.L.1    Mills, A.L.2
  • 14
    • 0031886729 scopus 로고    scopus 로고
    • Evolutionarily singular strategies and the adaptive growth and branching of the evolutionary tree
    • Geritz, S. A. H., E. Kisdi, G. Mesze NA, and J. A. J. Metz. 1998. Evolutionarily singular strategies and the adaptive growth and branching of the evolutionary tree. Evol. Ecol. 12:35-57.
    • (1998) Evol. Ecol. , vol.12 , pp. 35-57
    • Geritz, S.A.H.1    Kisdi, E.2    Mesze, N.A.G.3    Metz, J.A.J.4
  • 16
    • 77955972009 scopus 로고    scopus 로고
    • An integrative approach to understanding microbial diversity: from intracellular mechanisms to community structure
    • Gudelj, I., J. S. Weitz, T. Ferenci, M. Claire Horner-Devine, C. J. Marx, J. R. Meyer, et al. 2010. An integrative approach to understanding microbial diversity: from intracellular mechanisms to community structure. Ecol. Lett. 13:1073-1084.
    • (2010) Ecol. Lett. , vol.13 , pp. 1073-1084
    • Gudelj, I.1    Weitz, J.S.2    Ferenci, T.3    Claire Horner-Devine, M.4    Marx, C.5    Meyer, J.R.6
  • 17
    • 67650627521 scopus 로고    scopus 로고
    • Genetic and metabolic biodiversity of Trichoderma from Colombia and adjacent neotropic regions
    • Hoyos-Carvajal, L., S. Orduz, and J. Bissett. 2009. Genetic and metabolic biodiversity of Trichoderma from Colombia and adjacent neotropic regions. Fungal Genet. Biol. 46:615-631.
    • (2009) Fungal Genet. Biol. , vol.46 , pp. 615-631
    • Hoyos-Carvajal, L.1    Orduz, S.2    Bissett, J.3
  • 18
    • 84878462125 scopus 로고    scopus 로고
    • Mixing of vineyard and oak-tree ecotypes of Saccharomyces cerevisiae in North American vineyards
    • Hyma, K. E., and J. C. Fay. 2013. Mixing of vineyard and oak-tree ecotypes of Saccharomyces cerevisiae in North American vineyards. Mol. Ecol. 22:2917-2930.
    • (2013) Mol. Ecol. , vol.22 , pp. 2917-2930
    • Hyma, K.E.1    Fay, J.C.2
  • 21
    • 0031920135 scopus 로고    scopus 로고
    • The use of carbon substrate utilization patterns in environmental and ecological microbiology
    • Konopka, A., L. Oliver, and R. F. Turco Jr. 1998. The use of carbon substrate utilization patterns in environmental and ecological microbiology. Microb. Ecol. 35:103-115.
    • (1998) Microb. Ecol. , vol.35 , pp. 103-115
    • Konopka, A.1    Oliver, L.2    Turco, R.F.3
  • 22
    • 33751235592 scopus 로고    scopus 로고
    • The spatial scale of genetic differentiation in a model organism: the wild yeast Saccharomyces paradoxus
    • Koufopanou, V., J. Hughes, G. Bell, and A. Burt. 2006. The spatial scale of genetic differentiation in a model organism: the wild yeast Saccharomyces paradoxus. Philos. Trans. R. Soc. Lond. B Biol. Sci. 361:1941-1946.
    • (2006) Philos. Trans. R. Soc. Lond. B Biol. Sci. , vol.361 , pp. 1941-1946
    • Koufopanou, V.1    Hughes, J.2    Bell, G.3    Burt, A.4
  • 25
    • 77955765927 scopus 로고    scopus 로고
    • Comparison of the Mantel test and alternative approaches for detecting complex multivariate relationships in the spatial analysis of genetic data
    • Legendre, P., and M.-J. Fortin. 2010. Comparison of the Mantel test and alternative approaches for detecting complex multivariate relationships in the spatial analysis of genetic data. Mol. Ecol. Resour. 10:831-844.
    • (2010) Mol. Ecol. Resour. , vol.10 , pp. 831-844
    • Legendre, P.1    Fortin, M.-J.2
  • 27
    • 0020069233 scopus 로고
    • Pentose phosphate pathway mutants of yeast
    • Lobo, Z., and P. K. Maitra. 1982. Pentose phosphate pathway mutants of yeast. Mol. Gen. Genet. 185:367-368.
    • (1982) Mol. Gen. Genet. , vol.185 , pp. 367-368
    • Lobo, Z.1    Maitra, P.K.2
  • 28
    • 84864432664 scopus 로고    scopus 로고
    • Widespread disruptive selection in the wild is associated with intense resource competition
    • Martin, R. A., and D. W. Pfennig. 2012. Widespread disruptive selection in the wild is associated with intense resource competition. BMC Evol. Biol. 12:136.
    • (2012) BMC Evol. Biol. , vol.12 , pp. 136
    • Martin, R.A.1    Pfennig, D.W.2
  • 29
    • 80051502271 scopus 로고    scopus 로고
    • Evaluation of the Biolog MicroStation system for yeast identification
    • McGinnis, M. R., T. C. Molina, D. L. Pierson, and S. K. Mishra. 1996. Evaluation of the Biolog MicroStation system for yeast identification. J. Med. Vet. Mycol. 34:349-352.
    • (1996) J. Med. Vet. Mycol. , vol.34 , pp. 349-352
    • McGinnis, M.R.1    Molina, T.C.2    Pierson, D.L.3    Mishra, S.K.4
  • 30
    • 0032216373 scopus 로고    scopus 로고
    • Saccharomyces paradoxus and S. cerevisiae are associated with exudates of North America n oaks
    • Naumov, G. I., E. S. Naumova, and P. D. Sniegowski. 1998. Saccharomyces paradoxus and S. cerevisiae are associated with exudates of North America n oaks. Can. J. Microbiol. 44:1045-1050.
    • (1998) Can. J. Microbiol. , vol.44 , pp. 1045-1050
    • Naumov, G.I.1    Naumova, E.S.2    Sniegowski, P.D.3
  • 32
    • 84872250100 scopus 로고    scopus 로고
    • Coevolution trumps pleiotropy: carbon assimilation traits are independent of metabolic network structure in budding yeast
    • Opulente, D. A., C. M. Morales, L. B. Carey, and J. S. Rest. 2013. Coevolution trumps pleiotropy: carbon assimilation traits are independent of metabolic network structure in budding yeast. PLoS ONE 8:e54403.
    • (2013) PLoS ONE , vol.8 , pp. e54403
    • Opulente, D.A.1    Morales, C.M.2    Carey, L.B.3    Rest, J.S.4
  • 33
    • 0020924469 scopus 로고
    • The effect of body size on animal abundance
    • Peters, R. H., and K. Wassenberg. 1983. The effect of body size on animal abundance. Oecologia 60:89-96.
    • (1983) Oecologia , vol.60 , pp. 89-96
    • Peters, R.H.1    Wassenberg, K.2
  • 34
    • 0030910201 scopus 로고    scopus 로고
    • Evaluation of the Biolog system for the identification of food and beverage yeasts
    • Praphailong, W., M. Van Gestel, G. H. Fleet, and G. M. Heard. 1997. Evaluation of the Biolog system for the identification of food and beverage yeasts. Lett. Appl. Microbiol. 24:455-459.
    • (1997) Lett. Appl. Microbiol. , vol.24 , pp. 455-459
    • Praphailong, W.1    Van Gestel, M.2    Fleet, G.H.3    Heard, G.M.4
  • 35
  • 36
    • 62649126517 scopus 로고    scopus 로고
    • Comprehensive polymorphism survey elucidates population structure of Saccharomyces cerevisiae
    • Schacherer, J., J. A Shapiro, D. M. Ruderfer, and L. Kruglyak. 2009. Comprehensive polymorphism survey elucidates population structure of Saccharomyces cerevisiae. Nature 458:342-345.
    • (2009) Nature , vol.458 , pp. 342-345
    • Schacherer, J.1    Shapiro, J.A.2    Ruderfer, D.M.3    Kruglyak, L.4
  • 37
    • 0028119736 scopus 로고
    • The Ecology and Genetics of Fitness in Forest Plants. IV. Quantitative Genetics of Fitness Components in Impatiens pallida (Balsaminaceae)
    • Schoen, D. J., G. Bell, and M. J. Lechowicz. 1994. The Ecology and Genetics of Fitness in Forest Plants. IV. Quantitative Genetics of Fitness Components in Impatiens pallida (Balsaminaceae). Am. J. Bot. 81:232-239.
    • (1994) Am. J. Bot. , vol.81 , pp. 232-239
    • Schoen, D.J.1    Bell, G.2    Lechowicz, M.J.3
  • 38
    • 0036224204 scopus 로고    scopus 로고
    • Saccharomyces cerevisiae and Saccharomyces paradoxus coexist in a natural woodland site in north Ammerica and display different levels of reproductive isolation from European conspecifics
    • Sniegowski, P., P. Dombrowski, and E. Fingerman. 2002. Saccharomyces cerevisiae and Saccharomyces paradoxus coexist in a natural woodland site in north Ammerica and display different levels of reproductive isolation from European conspecifics. FEMS Yeast Res. 1:299-306.
    • (2002) FEMS Yeast Res. , vol.1 , pp. 299-306
    • Sniegowski, P.1    Dombrowski, P.2    Fingerman, E.3
  • 39
    • 42449128411 scopus 로고    scopus 로고
    • Population genomics of the wild yeast Saccharomyces paradoxus: quantifying the life cycle
    • Tsai, I. J., D. Bensasson, A. Burt, and V. Koufopanou. 2008. Population genomics of the wild yeast Saccharomyces paradoxus: quantifying the life cycle. Proc. Natl. Acad. Sci. U.S.A. 105:4957-4962.
    • (2008) Proc. Natl. Acad. Sci. U.S.A. , vol.105 , pp. 4957-4962
    • Tsai, I.J.1    Bensasson, D.2    Burt, A.3    Koufopanou, V.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.