-
2
-
-
84879764213
-
Asymptotic distributions of coalescence times and ancestral lineage numbers for populations with temporally varying size
-
Chen H., Chen K. Asymptotic distributions of coalescence times and ancestral lineage numbers for populations with temporally varying size. Genetics 2013, 194:721-736.
-
(2013)
Genetics
, vol.194
, pp. 721-736
-
-
Chen, H.1
Chen, K.2
-
3
-
-
0015183782
-
The number of neutral alleles maintained in a finite, geographically structured population
-
Crow J.F., Maruyama T. The number of neutral alleles maintained in a finite, geographically structured population. Theor. Popul. Biol. 1971, 2:437-453.
-
(1971)
Theor. Popul. Biol.
, vol.2
, pp. 437-453
-
-
Crow, J.F.1
Maruyama, T.2
-
4
-
-
0019827394
-
The number of heterozygous loci between two randomly chosen completely linked sequences of loci in two subdivided population models
-
Griffiths R.C. The number of heterozygous loci between two randomly chosen completely linked sequences of loci in two subdivided population models. J. Math. Biol. 1981, 12:251-261.
-
(1981)
J. Math. Biol.
, vol.12
, pp. 251-261
-
-
Griffiths, R.C.1
-
5
-
-
0021711355
-
Asymptotic line-of-descent distributions
-
Griffiths R.C. Asymptotic line-of-descent distributions. J. Math. Biol. 1984, 21:67-75.
-
(1984)
J. Math. Biol.
, vol.21
, pp. 67-75
-
-
Griffiths, R.C.1
-
6
-
-
0028782096
-
Sampling theory for neutral alleles in a varying environment
-
Griffiths R.C., Tavaré S. Sampling theory for neutral alleles in a varying environment. Philos. Trans. R. Soc. Lond. B 1994, 344:403-410.
-
(1994)
Philos. Trans. R. Soc. Lond. B
, vol.344
, pp. 403-410
-
-
Griffiths, R.C.1
Tavaré, S.2
-
8
-
-
79955372694
-
On computing coalescence time density in an isolation-with-migration model with few samples
-
Hobolth A., Andersen L.N., Mailund T. On computing coalescence time density in an isolation-with-migration model with few samples. Genetics 2011, 187:1241-1243.
-
(2011)
Genetics
, vol.187
, pp. 1241-1243
-
-
Hobolth, A.1
Andersen, L.N.2
Mailund, T.3
-
9
-
-
0001935493
-
Gene genealogies and the coalescent process
-
Oxford Univ. Press, New York, D. Futuyma, J. Antonovics (Eds.)
-
Hudson R.R. Gene genealogies and the coalescent process. Oxford Surveys in Evolutionary Biology, Vol. 7 1990, 1-44. Oxford Univ. Press, New York. D. Futuyma, J. Antonovics (Eds.).
-
(1990)
Oxford Surveys in Evolutionary Biology, Vol. 7
, pp. 1-44
-
-
Hudson, R.R.1
-
10
-
-
0036184745
-
Generating samples under a Wright-Fisher neutral model of genetic variation
-
Hudson R.R. Generating samples under a Wright-Fisher neutral model of genetic variation. Bioinformatics 2002, 18:337-338.
-
(2002)
Bioinformatics
, vol.18
, pp. 337-338
-
-
Hudson, R.R.1
-
11
-
-
33646555436
-
The effect of gene flow on the coalescent time in the human-chimpanzee ancestral population
-
Innan H., Watanabe H. The effect of gene flow on the coalescent time in the human-chimpanzee ancestral population. Mol. Biol. Evol. 2006, 23:1040-1047.
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 1040-1047
-
-
Innan, H.1
Watanabe, H.2
-
12
-
-
0842287651
-
The burgeoning field of statistical phylogeography
-
Knowles L.L. The burgeoning field of statistical phylogeography. J. Evol. Biol. 2004, 17:1-10.
-
(2004)
J. Evol. Biol.
, vol.17
, pp. 1-10
-
-
Knowles, L.L.1
-
14
-
-
32544444406
-
Likelihoods from summary statistics: recent divergence between species
-
Leman S.C., Chen Y., Stajich J.E., Noor M.A.F., Uyenoyama M.K. Likelihoods from summary statistics: recent divergence between species. Genetics 2005, 171:1419-1436.
-
(2005)
Genetics
, vol.171
, pp. 1419-1436
-
-
Leman, S.C.1
Chen, Y.2
Stajich, J.E.3
Noor, M.A.F.4
Uyenoyama, M.K.5
-
15
-
-
0017268602
-
Distribution of nucleotide differences between two randomly chosen cistrons in a subdivided population: the finite island model
-
Li W.-H. Distribution of nucleotide differences between two randomly chosen cistrons in a subdivided population: the finite island model. Theor. Popul. Biol. 1976, 10:303-308.
-
(1976)
Theor. Popul. Biol.
, vol.10
, pp. 303-308
-
-
Li, W.-H.1
-
16
-
-
81255210687
-
A general method for calculating likelihoods under the coalescent process
-
Lohse K., Harrison R.J., Bartoni N.H. A general method for calculating likelihoods under the coalescent process. Genetics 2011, 189:977-987.
-
(2011)
Genetics
, vol.189
, pp. 977-987
-
-
Lohse, K.1
Harrison, R.J.2
Bartoni, N.H.3
-
17
-
-
79953744766
-
Estimating divergence time and ancestral effective population size of Bornean and Sumatran orangutan subspecies using a coalescent hidden Markov model
-
Mailund T., Dutheil J.Y., Hobolth A., Lunter G., Schierup M.H. Estimating divergence time and ancestral effective population size of Bornean and Sumatran orangutan subspecies using a coalescent hidden Markov model. PLoS Genet. 2011, 7:e1001319.
-
(2011)
PLoS Genet.
, vol.7
, pp. e1001319
-
-
Mailund, T.1
Dutheil, J.Y.2
Hobolth, A.3
Lunter, G.4
Schierup, M.H.5
-
18
-
-
0027738276
-
The coalescent in two colonies with symmetric migration
-
Nath H.B., Griffiths R.C. The coalescent in two colonies with symmetric migration. J. Math. Biol. 1993, 31:841-852.
-
(1993)
J. Math. Biol.
, vol.31
, pp. 841-852
-
-
Nath, H.B.1
Griffiths, R.C.2
-
19
-
-
0015447959
-
Identity of genes by descent within and between populations under mutation and migration pressures
-
Nei M., Feldman M.W. Identity of genes by descent within and between populations under mutation and migration pressures. Theor. Popul. Biol. 1972, 3:460-465.
-
(1972)
Theor. Popul. Biol.
, vol.3
, pp. 460-465
-
-
Nei, M.1
Feldman, M.W.2
-
21
-
-
0034967295
-
Distinguishing migration from isolation: a Markov chain Monte Carlo approach
-
Nielsen R., Wakeley J. Distinguishing migration from isolation: a Markov chain Monte Carlo approach. Genetics 2001, 158:885-896.
-
(2001)
Genetics
, vol.158
, pp. 885-896
-
-
Nielsen, R.1
Wakeley, J.2
-
22
-
-
0037289895
-
A note on distributions of times to coalescence, under time-dependent population size
-
Polanski A., Bobrowski A., Kimmel M. A note on distributions of times to coalescence, under time-dependent population size. Theor. Popul. Biol. 2003, 63:33-40.
-
(2003)
Theor. Popul. Biol.
, vol.63
, pp. 33-40
-
-
Polanski, A.1
Bobrowski, A.2
Kimmel, M.3
-
23
-
-
84859893546
-
Tail paradox, partial identifiability, and influential priors in Bayesian branch length inference
-
Rannala B., Zhu T., Yang Z. Tail paradox, partial identifiability, and influential priors in Bayesian branch length inference. Mol. Biol. Evol. 2012, 29:325-335.
-
(2012)
Mol. Biol. Evol.
, vol.29
, pp. 325-335
-
-
Rannala, B.1
Zhu, T.2
Yang, Z.3
-
24
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist F., Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003, 19:1572-1574.
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
25
-
-
0001486658
-
The relationship between coalescence times and population divergence times
-
Oxford University Press, Oxford, M. Slatkin, M. Veuille (Eds.)
-
Rosenberg N.A., Feldman M.W. The relationship between coalescence times and population divergence times. Modern Developments in Theoretical Population Genetics-The Legacy of Gustave Malécot 2002, 130-164. Oxford University Press, Oxford. M. Slatkin, M. Veuille (Eds.).
-
(2002)
Modern Developments in Theoretical Population Genetics-The Legacy of Gustave Malécot
, pp. 130-164
-
-
Rosenberg, N.A.1
Feldman, M.W.2
-
26
-
-
0001615347
-
Average number of nucleotide differences in a sample from a single subpopulation: a test for population subdivision
-
Strobeck C. Average number of nucleotide differences in a sample from a single subpopulation: a test for population subdivision. Genetics 1987, 117:149-155.
-
(1987)
Genetics
, vol.117
, pp. 149-155
-
-
Strobeck, C.1
-
27
-
-
0024262745
-
The coalescent in two partially isolated diffusion populations
-
Takahata N. The coalescent in two partially isolated diffusion populations. Genet. Res. 1988, 52:213-222.
-
(1988)
Genet. Res.
, vol.52
, pp. 213-222
-
-
Takahata, N.1
-
28
-
-
0035144108
-
Testing multiregionality of modern human origins
-
Takahata N., Lee S.-H., Satta Y. Testing multiregionality of modern human origins. Mol. Biol. Evol. 2001, 18:172-183.
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 172-183
-
-
Takahata, N.1
Lee, S.-H.2
Satta, Y.3
-
29
-
-
0025618391
-
Genealogy of neutral genes in two partially isolated populations
-
Takahata N., Slatkin M. Genealogy of neutral genes in two partially isolated populations. Theor. Popul. Biol. 1990, 38:331-350.
-
(1990)
Theor. Popul. Biol.
, vol.38
, pp. 331-350
-
-
Takahata, N.1
Slatkin, M.2
-
30
-
-
0021514720
-
Line-of-descent and genealogical processes, and their applications in population genetics models
-
Tavaré S. Line-of-descent and genealogical processes, and their applications in population genetics models. Theor. Popul. Biol. 1984, 26:119-164.
-
(1984)
Theor. Popul. Biol.
, vol.26
, pp. 119-164
-
-
Tavaré, S.1
-
32
-
-
1842711798
-
A simple method for computing exact probabilities of mutation numbers
-
Uyenoyama M.K., Takebayashi N. A simple method for computing exact probabilities of mutation numbers. Theor. Popul. Biol. 2004, 65:271-284.
-
(2004)
Theor. Popul. Biol.
, vol.65
, pp. 271-284
-
-
Uyenoyama, M.K.1
Takebayashi, N.2
-
33
-
-
21444445665
-
Pairwise differences under a general a model of population subdivision
-
Wakeley J. Pairwise differences under a general a model of population subdivision. J. Genet. 1996, 75:81-89.
-
(1996)
J. Genet.
, vol.75
, pp. 81-89
-
-
Wakeley, J.1
-
34
-
-
0035714381
-
The coalescent in an island model of population subdivision with variation among demes
-
Wakeley J. The coalescent in an island model of population subdivision with variation among demes. Theor. Popul. Biol. 2001, 59:133-144.
-
(2001)
Theor. Popul. Biol.
, vol.59
, pp. 133-144
-
-
Wakeley, J.1
-
35
-
-
77749261628
-
Estimating divergence parameters with small samples from a large number of loci
-
Wang Y., Hey J. Estimating divergence parameters with small samples from a large number of loci. Genetics 2010, 184:363-379.
-
(2010)
Genetics
, vol.184
, pp. 363-379
-
-
Wang, Y.1
Hey, J.2
-
36
-
-
84864351563
-
Postglacial colonization of the Qinling Mountains: phylogeography of the swelled vent frog (Feirana quadranus)
-
Wang B., Jiang J., Xie F., Li C. Postglacial colonization of the Qinling Mountains: phylogeography of the swelled vent frog (Feirana quadranus). PLoS One 2012, 7:e41579.
-
(2012)
PLoS One
, vol.7
, pp. e41579
-
-
Wang, B.1
Jiang, J.2
Xie, F.3
Li, C.4
-
37
-
-
0016491430
-
On the number of segregating sites in genetical models without recombination
-
Watterson G.A. On the number of segregating sites in genetical models without recombination. Theor. Popul. Biol. 1975, 7:256-276.
-
(1975)
Theor. Popul. Biol.
, vol.7
, pp. 256-276
-
-
Watterson, G.A.1
-
38
-
-
39149111906
-
The distribution of the coalescence time and the number of pairwise nucleotide differences in the isolation with migration model
-
Wilkinson-Herbots H.M. The distribution of the coalescence time and the number of pairwise nucleotide differences in the isolation with migration model. Theor. Popul. Biol. 2008, 73:277-288.
-
(2008)
Theor. Popul. Biol.
, vol.73
, pp. 277-288
-
-
Wilkinson-Herbots, H.M.1
-
39
-
-
84866889123
-
Maximum likelihood implementation of an isolation-with-migration model with three species for testing speciation with gene flow
-
Zhu T., Yang Z. Maximum likelihood implementation of an isolation-with-migration model with three species for testing speciation with gene flow. Mol. Biol. Evol. 2012, 29:3131-3142.
-
(2012)
Mol. Biol. Evol.
, vol.29
, pp. 3131-3142
-
-
Zhu, T.1
Yang, Z.2
|