SCOPUS 정보 검색 플랫폼

Volumn 23, Issue 13, 2015, Pages 3237-3247

Development of fluorescent peptide substrates and assays for the key autophagy-initiating cysteine protease enzyme, ATG4B

(8) Vezenkov, Lubomir a Honson, Nicolette S b Kumar, Nag S b Bosc, Damien a Kovacic, Suzana a Nguyen, Thanh G a Pfeifer, Tom A b Young, Robert N a

a SIMON FRASER UNIVERSITY (Canada)

b Centre for Drug Research and Development (Canada)

Author keywords

ATG4B; Autophagy; Cysteine protease; Fluorogenic peptide; Inhibitor; LC3; Screen; Substrate

Indexed keywords

AURINTRICARBOXYLIC ACID; CYSTEINE PROTEINASE; HYPERICIN; PHENYLALANYL CHLOROMETHYL KETONE; PROTEIN ATG4B; PROTEINASE INHIBITOR; UNCLASSIFIED DRUG; ATG4B PROTEIN, HUMAN; CYSTEINE PROTEINASE INHIBITOR; FLUORESCENT DYE; HYBRID PROTEIN; MAP1LC3B PROTEIN, HUMAN; MICROTUBULE ASSOCIATED PROTEIN; PEPTIDE;

ARTICLE; AUTOPHAGY; CONCENTRATION (PARAMETERS); CONCENTRATION RESPONSE; CONTROLLED STUDY; DRUG DETERMINATION; DRUG SCREENING; ENZYME ACTIVITY; ENZYME ASSAY; ENZYME INHIBITION; ENZYME SUBSTRATE; IC50; PROTEIN CLEAVAGE; AMINO ACID SEQUENCE; BIOASSAY; CHEMISTRY; FLUORESCENCE RESONANCE ENERGY TRANSFER; GENETICS; HUMAN; MOLECULAR GENETICS; PROTEIN DEGRADATION; SYNTHESIS;

AMINO ACID SEQUENCE; AUTOPHAGY; BIOLOGICAL ASSAY; CYSTEINE ENDOPEPTIDASES; CYSTEINE PROTEINASE INHIBITORS; FLUORESCENCE RESONANCE ENERGY TRANSFER; FLUORESCENT DYES; HUMANS; MICROTUBULE-ASSOCIATED PROTEINS; MOLECULAR SEQUENCE DATA; PEPTIDES; PROTEOLYSIS; RECOMBINANT FUSION PROTEINS;

EID: 84937435226 PISSN: 09680896 EISSN: 14643391 Source Type: Journal
DOI: 10.1016/j.bmc.2015.04.064 Document Type: Article

Times cited : (33)

References (38)

1
- 34848886914
- Z. Xie, and D.J. Klionsky Nat. Cell Biol. 9 2007 1102
- (2007) Nat. Cell Biol. , vol.9 , pp. 1102
- Xie, Z.¹ Klionsky, D.J.²

2
- 37649005234
- B. Levine, and G. Kroemer Cell 132 2008 27
- (2008) Cell , vol.132 , pp. 27
- Levine, B.¹ Kroemer, G.²

3
- 0034537290
- D.J. Klionsky, and S.D. Emr Science 290 2000 1717
- (2000) Science , vol.290 , pp. 1717
- Klionsky, D.J.¹ Emr, S.D.²

4
- 84891747382
- H. Feng, D. He, Z. Zao, and D.J. Klionsky Cell Res. 24 2014 24
- (2014) Cell Res. , vol.24 , pp. 24
- Feng, H.¹ He, D.² Zao, Z.³ Klionsky, D.J.⁴

5
- 20344406240
- J.J. Lum, R.J. DeBerardinis, and C.B. Thompson Nat. Rev. Mol. Cell Biol. 6 2005 439
- (2005) Nat. Rev. Mol. Cell Biol. , vol.6 , pp. 439
- Lum, J.J.¹ Deberardinis, R.J.² Thompson, C.B.³

6
- 84861526009
- E. White Nat. Rev. Cancer 12 2012 401
- (2012) Nat. Rev. Cancer , vol.12 , pp. 401
- White, E.¹

7
- 79951847989
- R.K. Amaravadi, J. Lippincott-Schwartz, X.M. Yin, W.A. Weiss, N. Takebe, W. Timmer, R.S. DiPaola, M.T. Lotze, and E. White Clin. Cancer Res. 17 2011 654
- (2011) Clin. Cancer Res. , vol.17 , pp. 654
- Amaravadi, R.K.¹ Lippincott-Schwartz, J.² Yin, X.M.³ Weiss, W.A.⁴ Takebe, N.⁵ Timmer, W.⁶ Dipaola, R.S.⁷ Lotze, M.T.⁸ White, E.⁹

8
- 56549116658
- M.A. Qadir, B. Kwok, W.H. Dragowska, K.H. To, D. Le, M.B. Bally, and S.M. Gorski Breast Cancer Res. Treat. 112 2008 389
- (2008) Breast Cancer Res. Treat. , vol.112 , pp. 389
- Qadir, M.A.¹ Kwok, B.² Dragowska, W.H.³ To, K.H.⁴ Le, D.⁵ Bally, M.B.⁶ Gorski, S.M.⁷

9
- 84885412828
- W.H. Dragowska, S.A. Weppler, J.C. Wang, L.Y. Wong, A.I. Kapanen, J.S. Rawji, C. Warburton, M.A. Qadir, E. Donohue, M. Roberge, S.M. Gorski, K.A. Gelmon, and M.B. Bally PLoS One 8 2013 e76503
- (2013) PLoS One , vol.8
- Dragowska, W.H.¹ Weppler, S.A.² Wang, J.C.³ Wong, L.Y.⁴ Kapanen, A.I.⁵ Rawji, J.S.⁶ Warburton, C.⁷ Qadir, M.A.⁸ Donohue, E.⁹ Roberge, M.¹⁰ Gorski, S.M.¹¹ Gelmon, K.A.¹² Bally, M.B.¹³

10
- 84902652254
- S. Chittaranjan, S. Bortnik, W.H. Dragowska, J. Xu, N. Abeysundara, A. Leung, N.E. Go, L. DeVorkin, S.A. Weppler, K. Gelmon, D.T. Yapp, M.B. Bally, and S.M. Gorski Clin. Cancer Res. 20 2014 3159
- (2014) Clin. Cancer Res. , vol.20 , pp. 3159
- Chittaranjan, S.¹ Bortnik, S.² Dragowska, W.H.³ Xu, J.⁴ Abeysundara, N.⁵ Leung, A.⁶ Go, N.E.⁷ Devorkin, L.⁸ Weppler, S.A.⁹ Gelmon, K.¹⁰ Yapp, D.T.¹¹ Bally, M.B.¹² Gorski, S.M.¹³

11
- 84890432985
- M.T. Rosenfeldt, J. O'Prey, J.P. Morton, C. Nixon, G. MacKay, A. Mrowinska, A. Au, T.S. Rai, L. Zheng, R. Ridgway, P.D. Adams, K.I. Anderson, E. Gottlieb, O.J. Sansom, and K.M. Ryan Nature 504 2013 296
- (2013) Nature , vol.504 , pp. 296
- Rosenfeldt, M.T.¹ O'Prey, J.² Morton, J.P.³ Nixon, C.⁴ MacKay, G.⁵ Mrowinska, A.⁶ Au, A.⁷ Rai, T.S.⁸ Zheng, L.⁹ Ridgway, R.¹⁰ Adams, P.D.¹¹ Anderson, K.I.¹² Gottlieb, E.¹³ Sansom, O.J.¹⁴ Ryan, K.M.¹⁵

12
- 84892882660
- S. Rao, L. Tortola, T. Perlot, G. Wirnsberger, M. Novatchkova, R. Nitsch, P. Sykacek, L. Frank, D. Schramek, V. Komnenovic, V. Sigl, K. Aumayr, G. Schmauss, N. Fellner, S. Handschuh, M. Glosmann, P. Pasierbek, M. Schlederer, G.P. Resch, Y. Ma, H. Yang, H. Popper, L. Kenner, G. Kroemer, and J.M. Penninger Nat. Commun. 5 2014 3056
- (2014) Nat. Commun. , vol.5 , pp. 3056
- Rao, S.¹ Tortola, L.² Perlot, T.³ Wirnsberger, G.⁴ Novatchkova, M.⁵ Nitsch, R.⁶ Sykacek, P.⁷ Frank, L.⁸ Schramek, D.⁹ Komnenovic, V.¹⁰ Sigl, V.¹¹ Aumayr, K.¹² Schmauss, G.¹³ Fellner, N.¹⁴ Handschuh, S.¹⁵ Glosmann, M.¹⁶ Pasierbek, P.¹⁷ Schlederer, M.¹⁸ Resch, G.P.¹⁹ Ma, Y.²⁰ more..

13
- 84859562694
- J.D. Mancias, and A.C. Kimmelman Oncotarget 2 2011 1302
- (2011) Oncotarget , vol.2 , pp. 1302
- Mancias, J.D.¹ Kimmelman, A.C.²

14
- 84861434652
- Q. McAfee, Z. Zhang, A. Samanta, S.M. Levi, X.H. Ma, S. Piao, J.P. Lynch, T. Uehara, A.R. Sepulveda, L.E. Davis, J.D. Winkler, and R.K. Amaravadi Proc. Natl. Acad. Sci. U.S.A. 109 2012 8253
- (2012) Proc. Natl. Acad. Sci. U.S.A. , vol.109 , pp. 8253
- McAfee, Q.¹ Zhang, Z.² Samanta, A.³ Levi, S.M.⁴ Ma, X.H.⁵ Piao, S.⁶ Lynch, J.P.⁷ Uehara, T.⁸ Sepulveda, A.R.⁹ Davis, L.E.¹⁰ Winkler, J.D.¹¹ Amaravadi, R.K.¹²

15
- 84905826525
- R. Rangwala, Y.C. Chang, J. Hu, K.M. Algazy, T.L. Evans, L.A. Fecher, L.M. Schuchter, D.A. Torigian, J.T. Panosian, A.B. Troxel, K.S. Tan, D.F. Heitjan, A.M. DeMichele, D.J. Vaughn, M. Redlinger, A. Alavi, J. Kaiser, L. Pontiggia, L.E. Davis, P.J. O'Dwyer, and R.K. Amaravadi Autophagy 10 2014 1391
- (2014) Autophagy , vol.10 , pp. 1391
- Rangwala, R.¹ Chang, Y.C.² Hu, J.³ Algazy, K.M.⁴ Evans, T.L.⁵ Fecher, L.A.⁶ Schuchter, L.M.⁷ Torigian, D.A.⁸ Panosian, J.T.⁹ Troxel, A.B.¹⁰ Tan, K.S.¹¹ Heitjan, D.F.¹² Demichele, A.M.¹³ Vaughn, D.J.¹⁴ Redlinger, M.¹⁵ Alavi, A.¹⁶ Kaiser, J.¹⁷ Pontiggia, L.¹⁸ Davis, L.E.¹⁹ O'Dwyer, P.J.²⁰ Amaravadi, R.K.²¹ more..

16
- 84905494696
- D.T. Vogl, E.A. Stadtmauer, K.S. Tan, D.F. Heitjan, L.E. Davis, L. Pontiggia, R. Rangwala, S. Piao, Y.C. Chang, E.C. Scott, T.M. Paul, C.W. Nichols, D.L. Porter, J. Kaplan, G. Mallon, J.E. Bradner, and R.K. Amaravadi Autophagy 10 2014 1380
- (2014) Autophagy , vol.10 , pp. 1380
- Vogl, D.T.¹ Stadtmauer, E.A.² Tan, K.S.³ Heitjan, D.F.⁴ Davis, L.E.⁵ Pontiggia, L.⁶ Rangwala, R.⁷ Piao, S.⁸ Chang, Y.C.⁹ Scott, E.C.¹⁰ Paul, T.M.¹¹ Nichols, C.W.¹² Porter, D.L.¹³ Kaplan, J.¹⁴ Mallon, G.¹⁵ Bradner, J.E.¹⁶ Amaravadi, R.K.¹⁷

17
- 84904062323
- R. Rangwala, R. Leone, Y.C. Chang, L.A. Fecher, L.M. Schuchter, A. Kramer, K.S. Tan, D.F. Heitjan, G. Rodgers, M. Gallagher, S. Piao, A.B. Troxel, T.L. Evans, A.M. DeMichele, K.L. Nathanson, P.J. O'Dwyer, J. Kaiser, L. Pontiggia, L.E. Davis, and R.K. Amaravadi Autophagy 10 2014 1369
- (2014) Autophagy , vol.10 , pp. 1369
- Rangwala, R.¹ Leone, R.² Chang, Y.C.³ Fecher, L.A.⁴ Schuchter, L.M.⁵ Kramer, A.⁶ Tan, K.S.⁷ Heitjan, D.F.⁸ Rodgers, G.⁹ Gallagher, M.¹⁰ Piao, S.¹¹ Troxel, A.B.¹² Evans, T.L.¹³ Demichele, A.M.¹⁴ Nathanson, K.L.¹⁵ O'Dwyer, P.J.¹⁶ Kaiser, J.¹⁷ Pontiggia, L.¹⁸ Davis, L.E.¹⁹ Amaravadi, R.K.²⁰ more..

18
- 84904062324
- D. Mahalingam, M. Mita, J. Sarantopoulos, L. Wood, R.K. Amaravadi, L.E. Davis, A.C. Mita, T.J. Curiel, C.M. Espitia, S.T. Nawrocki, F.J. Giles, and J.S. Carew Autophagy 10 2014 1403
- (2014) Autophagy , vol.10 , pp. 1403
- Mahalingam, D.¹ Mita, M.² Sarantopoulos, J.³ Wood, L.⁴ Amaravadi, R.K.⁵ Davis, L.E.⁶ Mita, A.C.⁷ Curiel, T.J.⁸ Espitia, C.M.⁹ Nawrocki, S.T.¹⁰ Giles, F.J.¹¹ Carew, J.S.¹²

19
- 34548077575
- S. Kimura, T. Noda, and T. Yoshimori Autophagy 3 2007 452
- (2007) Autophagy , vol.3 , pp. 452
- Kimura, S.¹ Noda, T.² Yoshimori, T.³

20
- 59349105233
- S. Kimura, N. Fujita, T. Noda, and T. Yoshimori Methods Enzymol. 452 2009 1
- (2009) Methods Enzymol. , vol.452 , pp. 1
- Kimura, S.¹ Fujita, N.² Noda, T.³ Yoshimori, T.⁴

21
- 84862618804
- U. Nair, W.L. Yen, M. Mari, Y. Cao, Z. Xie, M. Baba, F. Reggiori, and D.J. Klionsky Autophagy 8 2012 780
- (2012) Autophagy , vol.8 , pp. 780
- Nair, U.¹ Yen, W.L.² Mari, M.³ Cao, Y.⁴ Xie, Z.⁵ Baba, M.⁶ Reggiori, F.⁷ Klionsky, D.J.⁸

22
- 84857256919
- H. Nakatogawa, J. Ishii, E. Asai, and Y. Ohsumi Autophagy 8 2012 177
- (2012) Autophagy , vol.8 , pp. 177
- Nakatogawa, H.¹ Ishii, J.² Asai, E.³ Ohsumi, Y.⁴

23
- 4344604111
- I. Tanida, Y.S. Sou, J. Ezaki, N. Minematsu-Ikeguchi, T. Ueno, and E. Kominami J. Biol. Chem. 279 2004 36268
- (2004) J. Biol. Chem. , vol.279 , pp. 36268
- Tanida, I.¹ Sou, Y.S.² Ezaki, J.³ Minematsu-Ikeguchi, N.⁴ Ueno, T.⁵ Kominami, E.⁶

24
- 0347695019
- J. Hemelaar, V.S. Lelyveld, B.M. Kessler, and H.L. Ploegh J. Biol. Chem. 278 2003 51841
- (2003) J. Biol. Chem. , vol.278 , pp. 51841
- Hemelaar, J.¹ Lelyveld, V.S.² Kessler, B.M.³ Ploegh, H.L.⁴

25
- 79953190772
- M. Li, Y. Hou, J. Wang, X. Chen, Z.M. Shao, and X.M. Yin J. Biol. Chem. 286 2011 7327
- (2011) J. Biol. Chem. , vol.286 , pp. 7327
- Li, M.¹ Hou, Y.² Wang, J.³ Chen, X.⁴ Shao, Z.M.⁵ Yin, X.M.⁶

26
- 84905862710
- P.F. Liu, C.M. Leung, Y.H. Chang, J.S. Cheng, J.J. Chen, C.J. Weng, K.W. Tsai, C.J. Hsu, Y.C. Liu, P.C. Hsu, H.W. Pan, and C.W. Shu Autophagy 10 2014 1454
- (2014) Autophagy , vol.10 , pp. 1454
- Liu, P.F.¹ Leung, C.M.² Chang, Y.H.³ Cheng, J.S.⁴ Chen, J.J.⁵ Weng, C.J.⁶ Tsai, K.W.⁷ Hsu, C.J.⁸ Liu, Y.C.⁹ Hsu, P.C.¹⁰ Pan, H.W.¹¹ Shu, C.W.¹²

27
- 84919770275
- D. Akin, S.K. Wang, P. Habibzadegah-Tari, B. Law, D. Ostrov, M. Li, X.M. Yin, J.S. Kim, N. Horenstein, and W.A.J. Dunn Autophagy 10 2014 2021
- (2014) Autophagy , vol.10 , pp. 2021
- Akin, D.¹ Wang, S.K.² Habibzadegah-Tari, P.³ Law, B.⁴ Ostrov, D.⁵ Li, M.⁶ Yin, X.M.⁷ Kim, J.S.⁸ Horenstein, N.⁹ Dunn, W.A.J.¹⁰

28
- 84859145176
- M. Li, X. Chen, Q.Z. Ye, A. Vogt, and X.M. Yin Autophagy 8 2012 401
- (2012) Autophagy , vol.8 , pp. 401
- Li, M.¹ Chen, X.² Ye, Q.Z.³ Vogt, A.⁴ Yin, X.M.⁵

29
- 84898908105
- T.G. Nguyen, N.S. Honson, S. Arns, T.L. Davis, S. Dhe-Paganon, S. Kovacic, N.S. Kumar, T.A. Pfeifer, and R.N. Young Assay Drug Dev. Technol. 12 2014 176
- (2014) Assay Drug Dev. Technol. , vol.12 , pp. 176
- Nguyen, T.G.¹ Honson, N.S.² Arns, S.³ Davis, T.L.⁴ Dhe-Paganon, S.⁵ Kovacic, S.⁶ Kumar, N.S.⁷ Pfeifer, T.A.⁸ Young, R.N.⁹

30
- 70449564367
- H. Hayashi, M. Cuddy, V.C. Shu, K.W. Yip, C. Madiraju, P. Diaz, T. Matsuyama, M. Kaibara, K. Taniyama, S. Vasile, E. Sergienko, and J.C. Reed PLoS One 4 2009 e7655
- (2009) PLoS One , vol.4
- Hayashi, H.¹ Cuddy, M.² Shu, V.C.³ Yip, K.W.⁴ Madiraju, C.⁵ Diaz, P.⁶ Matsuyama, T.⁷ Kaibara, M.⁸ Taniyama, K.⁹ Vasile, S.¹⁰ Sergienko, E.¹¹ Reed, J.C.¹²

31
- 79951968329
- C.W. Shu, C. Madiraju, D. Zhai, K. Welsh, P. Diaz, E. Sergienko, R. Sano, and J.C. Reed J. Biomol. Screen. 16 2011 174
- (2011) J. Biomol. Screen. , vol.16 , pp. 174
- Shu, C.W.¹ Madiraju, C.² Zhai, D.³ Welsh, K.⁴ Diaz, P.⁵ Sergienko, E.⁶ Sano, R.⁷ Reed, J.C.⁸

32
- 77957656800
- C.W. Shu, M. Drag, M. Bekes, D. Zhai, G.S. Salvesen, and J.C. Reed Autophagy 6 2010 936
- (2010) Autophagy , vol.6 , pp. 936
- Shu, C.W.¹ Drag, M.² Bekes, M.³ Zhai, D.⁴ Salvesen, G.S.⁵ Reed, J.C.⁶

33
- 84870812983
- last accessed on March 3, 2014
- U.S. National Library of Medicine: PubChem BioActivity Summary, < http://pubchem.ncbi.nlm.nih.gov/assay/assay.cgi?aid = 588400 > (last accessed on March 3, 2014).
- U.S. National Library of Medicine: PubChem BioActivity Summary

34
- 65649136884
- K. Satoo, N.N. Noda, H. Kumeta, Y. Fujioka, N. Mizushima, Y. Ohsumi, and F. Inagaki EMBO J. 28 2009 1341
- (2009) EMBO J. , vol.28 , pp. 1341
- Satoo, K.¹ Noda, N.N.² Kumeta, H.³ Fujioka, Y.⁴ Mizushima, N.⁵ Ohsumi, Y.⁶ Inagaki, F.⁷

35
- 28844502647
- K. Sugawara, N.N. Suzuki, Y. Fujioka, N. Mizushima, Y. Ohsumi, and F. Inagaki J. Biol. Chem. 280 2005 40058
- (2005) J. Biol. Chem. , vol.280 , pp. 40058
- Sugawara, K.¹ Suzuki, N.N.² Fujioka, Y.³ Mizushima, N.⁴ Ohsumi, Y.⁵ Inagaki, F.⁶

36
- 0037423403
- G. Marino, J.A. Uria, X.S. Puente, V. Quesada, J. Bordallo, and C. Lopez-Otin J. Biol. Chem. 278 2003 3671
- (2003) J. Biol. Chem. , vol.278 , pp. 3671
- Marino, G.¹ Uria, J.A.² Puente, X.S.³ Quesada, V.⁴ Bordallo, J.⁵ Lopez-Otin, C.⁶

37
- 50249099209
- J.A. Richard, Y. Meyer, V. Jolivel, M. Massonneau, R. Dumeunier, D. Vaudry, H. Vaudry, P.Y. Renard, and A. Romieu Bioconjugate Chem. 19 2008 1707
- (2008) Bioconjugate Chem. , vol.19 , pp. 1707
- Richard, J.A.¹ Meyer, Y.² Jolivel, V.³ Massonneau, M.⁴ Dumeunier, R.⁵ Vaudry, D.⁶ Vaudry, H.⁷ Renard, P.Y.⁸ Romieu, A.⁹

38
- 0015861774
- Y. Cheng, and W.H. Prusoff Biochem. Pharmacol. 22 1973 3099
- (1973) Biochem. Pharmacol. , vol.22 , pp. 3099
- Cheng, Y.¹ Prusoff, W.H.²

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