-
1
-
-
84875761771
-
geomorph: An R package for the collection and analysis of geometric morphometric shape data
-
Adams D.C., Otárola-Castillo E. 2013. geomorph: an R package for the collection and analysis of geometric morphometric shape data. Methods Ecol. Evol. 4:393-399.
-
(2013)
Methods Ecol. Evol.
, vol.4
, pp. 393-399
-
-
Adams, D.C.1
Otárola-Castillo, E.2
-
2
-
-
84906267632
-
A generalized K statistic for estimating phylogenetic signal from shape and other high-dimensional multivariate data
-
Adams D.C. 2014a. A generalized K statistic for estimating phylogenetic signal from shape and other high-dimensional multivariate data. Syst. Biol. 63:685-697.
-
(2014)
Syst. Biol.
, vol.63
, pp. 685-697
-
-
Adams, D.C.1
-
3
-
-
84907996219
-
A method for assessing phylogenetic least squares models for shape and other high-dimensional multivariate data
-
Adams D.C. 2014b. A method for assessing phylogenetic least squares models for shape and other high-dimensional multivariate data. Evolution 68:2675-2688.
-
(2014)
Evolution
, vol.68
, pp. 2675-2688
-
-
Adams, D.C.1
-
4
-
-
84894514976
-
Quantifying and comparing phylogenetic evolutionary rates for shape and other high-dimensional phenotypic data
-
Adams D.C. 2014c. Quantifying and comparing phylogenetic evolutionary rates for shape and other high-dimensional phenotypic data. Syst. Biol. 63:166-177.
-
(2014)
Syst. Biol.
, vol.63
, pp. 166-177
-
-
Adams, D.C.1
-
5
-
-
84899621149
-
Assessing trait covariation and morphological integration on phylogenies using evolutionary covariance matrices
-
Adams D.C., Felice R.N. 2014. Assessing trait covariation and morphological integration on phylogenies using evolutionary covariance matrices. PLoS ONE 9:e94335.
-
(2014)
PLoS ONE
, vol.9
-
-
Adams, D.C.1
Felice, R.N.2
-
6
-
-
84937049480
-
geomorph: Software for geometric morphometric analyses
-
Vienna, Austria last accessed December 17, 2014
-
Adams D.C., Otárola-Castillo E., Sherratt E. 2014. geomorph: software for geometric morphometric analyses. CRAN: The Comprehensive R Archive Network, Vienna, Austria. http://cran.r-project.org/package=geomorph (last accessed December 17, 2014).
-
(2014)
CRAN: The Comprehensive R Archive Network
-
-
Adams, D.C.1
Otárola-Castillo, E.2
Sherratt, E.3
-
7
-
-
84857190208
-
Functional Phylogenies Group. Phylogenetic inference for function-valued traits: Speech sound evolution
-
Aston J.A.D, Buck D., Coleman J., Cotter C.J., Jones N.S., Macaulay V., MacLeod N., Moriarty J.M., Nevins A. 2012. Functional Phylogenies Group. Phylogenetic inference for function-valued traits: speech sound evolution. Trends Ecol. Evol. 27:160-166.
-
(2012)
Trends Ecol. Evol.
, vol.27
, pp. 160-166
-
-
Aston, J.A.D.1
Buck, D.2
Coleman, J.3
Cotter, C.J.4
Jones, N.S.5
Macaulay, V.6
MacLeod, N.7
Moriarty, J.M.8
Nevins, A.9
-
8
-
-
0038325772
-
Testing for phylogenetic signal in comparative data: Behavioral traits are more labile
-
Blomberg S.P., Garland T., Ives A.R. 2003. Testing for phylogenetic signal in comparative data: behavioral traits are more labile. Evolution 57:717-745.
-
(2003)
Evolution
, vol.57
, pp. 717-745
-
-
Blomberg, S.P.1
Garland, T.2
Ives, A.R.3
-
9
-
-
33745005950
-
Climate change - Evolutionary response to rapid climate change
-
Bradshaw W.E., Holzapfel C.M. 2006. Climate change - evolutionary response to rapid climate change. Science 312:1477-1478.
-
(2006)
Science
, vol.312
, pp. 1477-1478
-
-
Bradshaw, W.E.1
Holzapfel, C.M.2
-
10
-
-
45249107816
-
Phenotypic plasticity, costs of phenotypes, and costs of plasticity toward an integrative view
-
Callahan H.S., Maughan H., Steiner U.K. 2008. Phenotypic plasticity, costs of phenotypes, and costs of plasticity toward an integrative view. Ann. N. Y. Acad. Sci. 1133:44-66.
-
(2008)
Ann. N. Y. Acad. Sci.
, vol.1133
, pp. 44-66
-
-
Callahan, H.S.1
Maughan, H.2
Steiner, U.K.3
-
12
-
-
84894106696
-
Ecological and evolutionary lability of plant traits affecting carbon and nutrient cycling
-
Donovan L.A., Mason C.M., Bowsher A.W., Goolsby E.W., Ishibashi C.D.A. 2014. Ecological and evolutionary lability of plant traits affecting carbon and nutrient cycling. J. Ecol. 102:302-314.
-
(2014)
J. Ecol.
, vol.102
, pp. 302-314
-
-
Donovan, L.A.1
Mason, C.M.2
Bowsher, A.W.3
Goolsby, E.W.4
Ishibashi, C.D.A.5
-
13
-
-
0022203256
-
Phylogenies and the comparative method
-
Felsenstein J. 1985. Phylogenies and the comparative method. Am. Nat. 125:1-15.
-
(1985)
Am. Nat.
, vol.125
, pp. 1-15
-
-
Felsenstein, J.1
-
14
-
-
0034001912
-
Using the past to predict the present: Confidence intervals for regression equations in phylogenetic comparative methods
-
Garland T., Ives A.R. 2000. Using the past to predict the present: confidence intervals for regression equations in phylogenetic comparative methods. Am. Nat. 155:346-364.
-
(2000)
Am. Nat.
, vol.155
, pp. 346-364
-
-
Garland, T.1
Ives, A.R.2
-
15
-
-
33746009658
-
An introduction to phylogenetically based statistical methods, with a new method for confidence intervals on ancestral values
-
Garland T., Midford P.E., Ives A.R. 1999. An introduction to phylogenetically based statistical methods, with a new method for confidence intervals on ancestral values. Am. Zool. 39: 374-388.
-
(1999)
Am. Zool.
, vol.39
, pp. 374-388
-
-
Garland, T.1
Midford, P.E.2
Ives, A.R.3
-
16
-
-
70349448250
-
Computing and visualizing dynamic time warping alignments in R: The dtw package
-
Giorgino T. 2009. Computing and visualizing dynamic time warping alignments in R: the dtw package. J. Stat. Softw. 31:1-24.
-
(2009)
J. Stat. Softw.
, vol.31
, pp. 1-24
-
-
Giorgino, T.1
-
18
-
-
43049083685
-
Hypothesis testing in comparative and experimental studies of function-valued traits
-
Griswold C.K., Gomulkiewicz R., Heckman N. 2008. Hypothesis testing in comparative and experimental studies of function-valued traits. Evolution 62:1229-1242.
-
(2008)
Evolution
, vol.62
, pp. 1229-1242
-
-
Griswold, C.K.1
Gomulkiewicz, R.2
Heckman, N.3
-
19
-
-
84889650415
-
Phylogenetic eigenvector maps: A framework to model and predict species traits
-
Guenard G., Legendre P., Peres-Neto P. 2013. Phylogenetic eigenvector maps: a framework to model and predict species traits. Methods Ecol. Evol. 4:1120-1131.
-
(2013)
Methods Ecol. Evol.
, vol.4
, pp. 1120-1131
-
-
Guenard, G.1
Legendre, P.2
Peres-Neto, P.3
-
20
-
-
84555219808
-
Using phylogenetic information to predict species tolerances to toxic chemicals
-
Guenard G., von der Ohe P.C., de Zwart D., Legendre P., Lek S. 2011. Using phylogenetic information to predict species tolerances to toxic chemicals. Ecol. Appl. 21:3178-3190.
-
(2011)
Ecol. Appl.
, vol.21
, pp. 3178-3190
-
-
Guenard, G.1
Von Der Ohe, P.C.2
De Zwart, D.3
Legendre, P.4
Lek, S.5
-
21
-
-
84881286155
-
Function-valued traits in evolution
-
Hadjipantelis P.Z., Jones N.S., Moriarty J., Springate D.A., Knight C.G. 2013. Function-valued traits in evolution. J. R. Soc. Interface 10:20121032; doi:10.1098/rsif.2012.1032.
-
(2013)
J. R. Soc. Interface
, vol.10
-
-
Hadjipantelis, P.Z.1
Jones, N.S.2
Moriarty, J.3
Springate, D.A.4
Knight, C.G.5
-
22
-
-
34447280382
-
Within-species variation and measurement error in phylogenetic comparative methods
-
Ives A.R., Midford P.E., Garland T. Jr. 2007. Within-species variation and measurement error in phylogenetic comparative methods. Syst. Biol. 56:252-270.
-
(2007)
Syst. Biol.
, vol.56
, pp. 252-270
-
-
Ives, A.R.1
Midford, P.E.2
Garland, T.3
-
23
-
-
23044444245
-
Variation in continuous reaction norms: Quantifying directions of biological interest
-
Izem R., Kingsolver J.G. 2005. Variation in continuous reaction norms: quantifying directions of biological interest. Am. Nat. 166:277-289.
-
(2005)
Am. Nat.
, vol.166
, pp. 277-289
-
-
Izem, R.1
Kingsolver, J.G.2
-
24
-
-
84866331790
-
Analyzing reaction norm variation in the field vs. greenhouse: Comparing studies of plasticity and its adaptive value in two species of Erodium
-
Jacobs B.S., Latimer A.M. 2012. Analyzing reaction norm variation in the field vs. greenhouse: comparing studies of plasticity and its adaptive value in two species of Erodium. Perspect. Plant. Ecol. 14:325-334.
-
(2012)
Perspect. Plant. Ecol.
, vol.14
, pp. 325-334
-
-
Jacobs, B.S.1
Latimer, A.M.2
-
25
-
-
84871303564
-
Evolutionary inference for functionvalued traits: Gaussian process regression on phylogenies
-
Jones N.S., Moriarty J. 2013. Evolutionary inference for functionvalued traits: Gaussian process regression on phylogenies. J. R. Soc. Interface 10:20120616; doi:10.1098/rsif.2012.0616.
-
(2013)
J. R. Soc. Interface
, vol.10
-
-
Jones, N.S.1
Moriarty, J.2
-
26
-
-
0035706575
-
Variation, selection and evolution of function-valued traits
-
Kingsolver J.G., Gomulkiewicz R., Carter P.A. 2001. Variation, selection and evolution of function-valued traits. Genetica 112:87-104.
-
(2001)
Genetica
, vol.112
, pp. 87-104
-
-
Kingsolver, J.G.1
Gomulkiewicz, R.2
Carter, P.A.3
-
27
-
-
0142216278
-
Evolution and plasticity of photosynthetic thermal tolerance, specific leaf area and leaf size: Congeneric species from desert and coastal environments
-
Knight C.A., Ackerly D.D. 2003. Evolution and plasticity of photosynthetic thermal tolerance, specific leaf area and leaf size: congeneric species from desert and coastal environments. New Phytol. 160:337-347.
-
(2003)
New Phytol.
, vol.160
, pp. 337-347
-
-
Knight, C.A.1
Ackerly, D.D.2
-
28
-
-
84893632974
-
Linking diatom sensitivity to herbicides to phylogeny: A step forward for biomonitoring?
-
Larras F., Keck F., Montuelle B., Rimet F., Bouchez A. 2014. Linking diatom sensitivity to herbicides to phylogeny: a step forward for biomonitoring? Environ. Sci. Technol. 48:1921-1930.
-
(2014)
Environ. Sci. Technol.
, vol.48
, pp. 1921-1930
-
-
Larras, F.1
Keck, F.2
Montuelle, B.3
Rimet, F.4
Bouchez, A.5
-
29
-
-
0030619995
-
Phylogenies and the comparative method: A general approach to incorporating phylogenetic information into the analysis of interspecific data
-
Martins E.P., Hansen T.F. 1997. Phylogenies and the comparative method: a general approach to incorporating phylogenetic information into the analysis of interspecific data. Am. Nat. 149:646-667.
-
(1997)
Am. Nat.
, vol.149
, pp. 646-667
-
-
Martins, E.P.1
Hansen, T.F.2
-
30
-
-
84886881654
-
Ontogeny strongly and differentially alters leaf economic and other key traits in three diverse Helianthus species
-
Mason C.M., McGaughey S.E., Donovan L.A. 2013. Ontogeny strongly and differentially alters leaf economic and other key traits in three diverse Helianthus species. J. Exp. Bot. 64:4089-4099.
-
(2013)
J. Exp. Bot.
, vol.64
, pp. 4089-4099
-
-
Mason, C.M.1
McGaughey, S.E.2
Donovan, L.A.3
-
31
-
-
84896484490
-
Evolutionary change in continuous reaction norms
-
Murren C.J., Maclean H.J., Diamond S.E., Steiner U.K., Heskel M.A., Handelsman C.A., Ghalambor C.K., Auld J.R., Callahan H.S., Pfennig D.W., Relyea R.A., Schlichting C.D., Kingsolver J. 2014. Evolutionary change in continuous reaction norms. Am. Nat. 183:453-467.
-
(2014)
Am. Nat.
, vol.183
, pp. 453-467
-
-
Murren, C.J.1
Maclean, H.J.2
Diamond, S.E.3
Steiner, U.K.4
Heskel, M.A.5
Handelsman, C.A.6
Ghalambor, C.K.7
Auld, J.R.8
Callahan, H.S.9
Pfennig, D.W.10
Relyea, R.A.11
Schlichting, C.D.12
Kingsolver, J.13
-
33
-
-
0033613376
-
Inferring the historical patterns of biological evolution
-
Pagel M.D. 1999. Inferring the historical patterns of biological evolution. Nature 401:877-844.
-
(1999)
Nature
, vol.401
, pp. 877-1844
-
-
Pagel, M.D.1
-
34
-
-
37849013027
-
Testing for phylogenetic signal in phenotypic traits: New matrices of phylogenetic proximities
-
Pavoine S., Ollier S., Pontier D., Chessel D. 2008. Testing for phylogenetic signal in phenotypic traits: new matrices of phylogenetic proximities. Theor. Pop. Biol. 73:79-91.
-
(2008)
Theor. Pop. Biol.
, vol.73
, pp. 79-91
-
-
Pavoine, S.1
Ollier, S.2
Pontier, D.3
Chessel, D.4
-
35
-
-
0037250943
-
Comparative studies of evolutionary responses to light environments in Arabidopsis
-
Pigliucci M., Pollard H., Cruzan M.B. 2003. Comparative studies of evolutionary responses to light environments in Arabidopsis. Am. Nat. 161:68-82.
-
(2003)
Am. Nat.
, vol.161
, pp. 68-82
-
-
Pigliucci, M.1
Pollard, H.2
Cruzan, M.B.3
-
36
-
-
0000542847
-
Comparative studies of reaction norms in Arabidopsis. I. Evolution of response to daylength
-
Pollard H., Cruzan M., Pigliucci M. 2001. Comparative studies of reaction norms in Arabidopsis. I. Evolution of response to daylength. Evol. Ecol. Res. 3:129-155.
-
(2001)
Evol. Ecol. Res.
, vol.3
, pp. 129-155
-
-
Pollard, H.1
Cruzan, M.2
Pigliucci, M.3
-
37
-
-
84907095419
-
R: A language and environment for statistical computing
-
Available from last accessed December 17, 2014
-
R Core Team 2014. R: a language and environment for statistical computing. Vienna (Austria) R Foundation for Statistical Computing. Available from: URL http://www.R-project.org/(last accessed December 17, 2014).
-
(2014)
Vienna (Austria) R Foundation for Statistical Computing
-
-
-
38
-
-
78650722302
-
Phylogenetic signal and linear regression on species data
-
Revell L.J. 2010. Phylogenetic signal and linear regression on species data. Methods Ecol. Evol. 1:319-329.
-
(2010)
Methods Ecol. Evol.
, vol.1
, pp. 319-329
-
-
Revell, L.J.1
-
39
-
-
84867364321
-
phytools: An R package for phylogenetic comparative biology (and other things)
-
Revell L.J. 2012. phytools: an R package for phylogenetic comparative biology (and other things). Methods Ecol. Evol. 3:217-223.
-
(2012)
Methods Ecol. Evol.
, vol.3
, pp. 217-223
-
-
Revell, L.J.1
-
40
-
-
33746671391
-
Jack of all trades, master of some? On the role of phenotypic plasticity in plant invasions
-
Richards C.L., Bossdorf O., Muth N.Z., Gurevitch J., Pigliucci M. 2006. Jack of all trades, master of some? On the role of phenotypic plasticity in plant invasions. Ecol. Lett. 9:981-993.
-
(2006)
Ecol. Lett.
, vol.9
, pp. 981-993
-
-
Richards, C.L.1
Bossdorf, O.2
Muth, N.Z.3
Gurevitch, J.4
Pigliucci, M.5
-
41
-
-
84868134104
-
Connecting the dots of nonlinear reaction norms unravels the threads of genotype-environment interaction in Drosophila
-
Rocha F.B., Klaczko L.B. 2012. Connecting the dots of nonlinear reaction norms unravels the threads of genotype-environment interaction in Drosophila. Evolution 66:3404-3416.
-
(2012)
Evolution
, vol.66
, pp. 3404-3416
-
-
Rocha, F.B.1
Klaczko, L.B.2
-
42
-
-
84860428591
-
Extensions of the Procrustes method for the optimal superimposition of landmarks
-
Rohlf F.J., Slice D.E. 1990. Extensions of the Procrustes method for the optimal superimposition of landmarks. Syst. Zool. 39:40-59.
-
(1990)
Syst. Zool.
, vol.39
, pp. 40-59
-
-
Rohlf, F.J.1
Slice, D.E.2
-
43
-
-
0035685482
-
Comparative methods for the analysis of continuous variables: Geometric interpretations
-
Rohlf, F. J. 2001. Comparative methods for the analysis of continuous variables: geometric interpretations. Evolution 55:2143-2160.
-
(2001)
Evolution
, vol.55
, pp. 2143-2160
-
-
Rohlf, F.J.1
-
44
-
-
84867219508
-
Function-valued traits working group. Genetics and evolution of function-valued traits: Understanding environmentally responsive phenotypes
-
Stinchcombe J.R., Kirkpatrick M. 2012. Function-valued traits working group. Genetics and evolution of function-valued traits: understanding environmentally responsive phenotypes. Trends Ecol. Evol. 27:637-647.
-
(2012)
Trends Ecol. Evol.
, vol.27
, pp. 637-647
-
-
Stinchcombe, J.R.1
Kirkpatrick, M.2
-
46
-
-
74549153420
-
What is phenotypic plasticity and why is it important?
-
Whitman D.W., Ananthakrishnan T.N. , editors Enfield (NH): Science Publishers
-
Whitman D.W., Agrawal A.A. 2009. What is phenotypic plasticity and why is it important? In: Whitman D.W., Ananthakrishnan T.N., editors. Phenoytpic plasticity of insects. Enfield (NH): Science Publishers. p. 1-63.
-
(2009)
Phenoytpic Plasticity of Insects.
, pp. 1-63
-
-
Whitman, D.W.1
Agrawal, A.A.2
-
47
-
-
84863446830
-
Assessing the impacts of phenotypic plasticity on evolution
-
Wund M.A. 2012. Assessing the impacts of phenotypic plasticity on evolution. Integr. Comp. Biol. 52:5-15.
-
(2012)
Integr. Comp. Biol.
, vol.52
, pp. 5-15
-
-
Wund, M.A.1
-
48
-
-
70449350390
-
New multivariate tests for phylogenetic signal and trait correlations applied to ecophsyiological phenotypes of nine Manglietia species
-
Zheng L., Ives A.R., Garland T., Larget B.R., Yu Y., Cao K. 2009. New multivariate tests for phylogenetic signal and trait correlations applied to ecophsyiological phenotypes of nine Manglietia species. Funct. Ecol. 23:1059-1069.
-
(2009)
Funct. Ecol.
, vol.23
, pp. 1059-1069
-
-
Zheng, L.1
Ives, A.R.2
Garland, T.3
Larget, B.R.4
Yu, Y.5
Cao, K.6
|