-
1
-
-
0037238008
-
Mind bomb is a ubiquitin ligase that is essential for efficient activation of Notch signaling by Delta
-
Itoh, M., Kim, C.-H., Palardy, G., Oda, T., Jiang, Y.-J., Maust, D., Yeo, S.-Y., Lorick, K., Wright, G. J., Ariza-McNaughton, L., Weissman, A. M., Lewis, J., Chandrasekharappa, S. C., and Chitnis, A. B. (2003) Mind bomb is a ubiquitin ligase that is essential for efficient activation of Notch signaling by Delta. Dev. Cell 4, 67-82.
-
(2003)
Dev. Cell
, vol.4
, pp. 67-82
-
-
Itoh, M.1
Kim, C.-H.2
Palardy, G.3
Oda, T.4
Jiang, Y.-J.5
Maust, D.6
Yeo, S.-Y.7
Lorick, K.8
Wright, G.J.9
Ariza-McNaughton, L.10
Weissman, A.M.11
Lewis, J.12
Chandrasekharappa, S.C.13
Chitnis, A.B.14
-
2
-
-
12644278866
-
Mutations affecting somite formation and patterning in the zebrafish, Danio rerio
-
Van Eeden, F. J., Granato, M., Schach, U., Brand, M., Furutani-Seiki, M., Haffter, P., Hammerschmidt, M., Heisenberg, C. P., Jiang, Y. J., Kane, D. A., Kelsh, R. N., Mullins, M. C., Odenthal, J., Warga, R. M., Allende, M. L., Weinberg, E. S., and Nüsslein-Volhard, C. (1996) Mutations affecting somite formation and patterning in the zebrafish, Danio rerio. Development 123, 153-164.
-
(1996)
Development
, vol.123
, pp. 153-164
-
-
Van Eeden, F.J.1
Granato, M.2
Schach, U.3
Brand, M.4
Furutani-Seiki, M.5
Haffter, P.6
Hammerschmidt, M.7
Heisenberg, C.P.8
Jiang, Y.J.9
Kane, D.A.10
Kelsh, R.N.11
Mullins, M.C.12
Odenthal, J.13
Warga, R.M.14
Allende, M.L.15
Weinberg, E.S.16
Nüsslein-Volhard, C.17
-
3
-
-
0032425547
-
Delta-Notch signaling and the patterning of sensory cell differentiation in the zebrafish ear: Evidence from the mind bomb mutant
-
Haddon, C., Jiang, Y. J., Smithers, L., and Lewis, J. (1998) Delta-Notch signaling and the patterning of sensory cell differentiation in the zebrafish ear: Evidence from the mind bomb mutant. Development 125, 4637-4644.
-
(1998)
Development
, vol.125
, pp. 4637-4644
-
-
Haddon, C.1
Jiang, Y.J.2
Smithers, L.3
Lewis, J.4
-
4
-
-
0034778258
-
Notch signaling is required for arterial-venous differentiation during embryonic vascular development
-
Lawson, N. D., Scheer, N., Pham, V. N., Kim, C. H., Chitnis, A. B., Campos- Ortega, J. A., and Weinstein, B. M. (2001) Notch signaling is required for arterial-venous differentiation during embryonic vascular development. Development 128, 3675-3683.
-
(2001)
Development
, vol.128
, pp. 3675-3683
-
-
Lawson, N.D.1
Scheer, N.2
Pham, V.N.3
Kim, C.H.4
Chitnis, A.B.5
Campos-Ortega, J.A.6
Weinstein, B.M.7
-
5
-
-
84875852222
-
The ubiquitin ligase Mindbomb 1 coordinates gastrointestinal secretory cell maturation
-
Capoccia, B. J., Jin, R. U., Kong, Y., Peek, R. M. Jr., Fassan, M., Rugge, M., and Mills, J. C. (2013) The ubiquitin ligase Mindbomb 1 coordinates gastrointestinal secretory cell maturation. J. Clin. Invest. 123, 23-27.
-
(2013)
J. Clin. Invest.
, vol.123
, pp. 23-27
-
-
Capoccia, B.J.1
Jin, R.U.2
Kong, Y.3
Peek, R.M.4
Fassan, M.5
Rugge, M.6
Mills, J.C.7
-
6
-
-
43249100317
-
An obligatory role of mind bomb-1 in notch signaling of mammalian development
-
Koo, B.-K., Yoon, M.-J., Yoon, K.-J., Im, S.-K., Kim, Y.-Y., Kim, C.-H., Suh, P.-G., Jan, Y. N., and Kong, Y.-Y. (2007) An obligatory role of mind bomb-1 in notch signaling of mammalian development. PLoS One 2, e1221.
-
(2007)
PLoS One
, vol.2
, pp. e1221
-
-
Koo, B.-K.1
Yoon, M.-J.2
Yoon, K.-J.3
Im, S.-K.4
Kim, Y.-Y.5
Kim, C.-H.6
Suh, P.-G.7
Jan, Y.N.8
Kong, Y.-Y.9
-
7
-
-
84857793295
-
The E3 ubiquitin ligase MIB1 negatively regulates basal IκBα level and modulates NF-κB activation
-
Liu, L.-J., Liu, T.-T., Ran, Y., Li, Y., Zhang, X.-D., Shu, H.-B., and Wang, Y.-Y. (2012) The E3 ubiquitin ligase MIB1 negatively regulates basal IκBα level and modulates NF-κB activation. Cell Res. 22, 603-606.
-
(2012)
Cell Res
, vol.22
, pp. 603-606
-
-
Liu, L.-J.1
Liu, T.-T.2
Ran, Y.3
Li, Y.4
Zhang, X.-D.5
Shu, H.-B.6
Wang, Y.-Y.7
-
8
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., Madden, T. L., Schäffer, A. A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D. J. (1997) Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
9
-
-
0141648464
-
Down-regulation of a novel actin-binding molecule, skeletrophin, in malignant melanoma
-
Takeuchi, T., Heng, H. H., Ye, C. J., Liang, S.-B., Iwata, J., Sonobe, H., and Ohtsuki, Y. (2003) Down-regulation of a novel actin-binding molecule, skeletrophin, in malignant melanoma. Am. J. Pathol. 163, 1395-1404.
-
(2003)
Am. J. Pathol.
, vol.163
, pp. 1395-1404
-
-
Takeuchi, T.1
Heng, H.H.2
Ye, C.J.3
Liang, S.-B.4
Iwata, J.5
Sonobe, H.6
Ohtsuki, Y.7
-
10
-
-
24344481807
-
Mind bomb 1 is essential for generating functional Notch ligands to activate Notch
-
Koo, B.-K., Lim, H.-S., Song, R., Yoon, M.-J., Yoon, K.-J., Moon, J.-S., Kim, Y.-W., Kwon, M.-C., Yoo, K.-W., Kong, M.-P., Lee, J., Chitnis, A. B., Kim, C.-H., and Kong, Y.-Y. (2005) Mind bomb 1 is essential for generating functional Notch ligands to activate Notch. Development 132, 3459-3470.
-
(2005)
Development
, vol.132
, pp. 3459-3470
-
-
Koo, B.-K.1
Lim, H.-S.2
Song, R.3
Yoon, M.-J.4
Yoon, K.-J.5
Moon, J.-S.6
Kim, Y.-W.7
Kwon, M.-C.8
Yoo, K.-W.9
Kong, M.-P.10
Lee, J.11
Chitnis, A.B.12
Kim, C.-H.13
Kong, Y.-Y.14
-
11
-
-
84867900905
-
Mind bomb-1 is an essential modulator of long-term memory and synaptic plasticity via the Notch signaling pathway
-
Yoon, K.-J., Lee, H.-R., Jo, Y. S., An, K., Jung, S.-Y., Jeong, M.-W., Kwon, S.-K., Kim, N.-S., Jeong, H.-W., Ahn, S.-H., Kim, K.-T., Lee, K., Kim, E., Kim, J.-H., Choi, J.-S., Kaang, B.-K., and Kong, Y.-Y. (2012) Mind bomb-1 is an essential modulator of long-term memory and synaptic plasticity via the Notch signaling pathway. Mol. Brain 5, 40.
-
(2012)
Mol. Brain
, vol.5
, pp. 40
-
-
Yoon, K.-J.1
Lee, H.-R.2
Jo, Y.S.3
An, K.4
Jung, S.-Y.5
Jeong, M.-W.6
Kwon, S.-K.7
Kim, N.-S.8
Jeong, H.-W.9
Ahn, S.-H.10
Kim, K.-T.11
Lee, K.12
Kim, E.13
Kim, J.-H.14
Choi, J.-S.15
Kaang, B.-K.16
Kong, Y.-Y.17
-
12
-
-
34548445136
-
Neuronal morphogenesis is regulated by the interplay between cyclin-dependent kinase 5 and the ubiquitin ligase mind bomb 1
-
Choe, E.-A., Liao, L., Zhou, J.-Y., Cheng, D., Duong, D. M., Jin, P., Tsai, L.-H., and Peng, J. (2007) Neuronal morphogenesis is regulated by the interplay between cyclin-dependent kinase 5 and the ubiquitin ligase mind bomb 1. J. Neurosci. 27, 9503-9512.
-
(2007)
J. Neurosci.
, vol.27
, pp. 9503-9512
-
-
Choe, E.-A.1
Liao, L.2
Zhou, J.-Y.3
Cheng, D.4
Duong, D.M.5
Jin, P.6
Tsai, L.-H.7
Peng, J.8
-
13
-
-
0029959555
-
The molecular biology of axon guidance
-
Tessier-Lavigne, M., and Goodman, C. S. (1996) The molecular biology of axon guidance. Science 274, 1123-1133.
-
(1996)
Science
, vol.274
, pp. 1123-1133
-
-
Tessier-Lavigne, M.1
Goodman, C.S.2
-
14
-
-
0035252919
-
Dendritic arbor development and synaptogenesis
-
Cline, H. T. (2001) Dendritic arbor development and synaptogenesis. Curr. Opin. Neurobiol. 11, 118-126.
-
(2001)
Curr. Opin. Neurobiol.
, vol.11
, pp. 118-126
-
-
Cline, H.T.1
-
15
-
-
0036194016
-
Structure and function of dendritic spines
-
Nimchinsky, E. a, Sabatini, B. L., and Svoboda, K. (2002) Structure and function of dendritic spines. Annu. Rev. Physiol. 64, 313-353.
-
(2002)
Annu. Rev. Physiol.
, vol.64
, pp. 313-353
-
-
Nimchinsky, E.A.1
Sabatini, B.L.2
Svoboda, K.3
-
16
-
-
0038071095
-
Cell- cell signaling during synapse formation in the CNS
-
Scheiffele, P. (2003) Cell- cell signaling during synapse formation in the CNS. Annu. Rev. Neurosci. 26, 485-508.
-
(2003)
Annu. Rev. Neurosci.
, vol.26
, pp. 485-508
-
-
Scheiffele, P.1
-
17
-
-
84879562441
-
The E3 ubiquitin ligase mind bomb 1 ubiquitinates and promotes the degradation of survival of motor neuron protein
-
Kwon, D. Y., Dimitriadi, M., Terzic, B., Cable, C., Hart, A. C., Chitnis, A., Fischbeck, K. H., and Burnett, B. G. (2013) The E3 ubiquitin ligase mind bomb 1 ubiquitinates and promotes the degradation of survival of motor neuron protein. Mol. Biol. Cell 24, 1863-1871.
-
(2013)
Mol. Biol. Cell
, vol.24
, pp. 1863-1871
-
-
Kwon, D.Y.1
Dimitriadi, M.2
Terzic, B.3
Cable, C.4
Hart, A.C.5
Chitnis, A.6
Fischbeck, K.H.7
Burnett, B.G.8
-
18
-
-
80052638746
-
Mindbomb 1, an E3 ubiquitin ligase, forms a complex with RYK to activate Wnt/{beta}-catenin signaling
-
Berndt, J. D., Aoyagi, A., Yang, P., Anastas, J. N., Tang, L., and Moon, R. T. (2011) Mindbomb 1, an E3 ubiquitin ligase, forms a complex with RYK to activate Wnt/{beta}-catenin signaling. J. Cell Biol. 194, 737-750.
-
(2011)
J. Cell Biol.
, vol.194
, pp. 737-750
-
-
Berndt, J.D.1
Aoyagi, A.2
Yang, P.3
Anastas, J.N.4
Tang, L.5
Moon, R.T.6
-
19
-
-
84899555355
-
New classes of mind bomb-interacting proteins identified from yeast two-hybrid screens
-
Tseng, L.-C., Zhang, C., Cheng, C.-M., Xu, H., Hsu, C.-H., and Jiang, Y.-J. (2014) New classes of mind bomb-interacting proteins identified from yeast two-hybrid screens. PLoS One 9, e93394.
-
(2014)
PLoS One
, vol.9
, pp. e93394
-
-
Tseng, L.-C.1
Zhang, C.2
Cheng, C.-M.3
Xu, H.4
Hsu, C.-H.5
Jiang, Y.-J.6
-
20
-
-
84874232489
-
The coming age of complete, accurate, and ubiquitous proteomes
-
Mann, M., Kulak, N. A., Nagaraj, N., and Cox, J. (2013) The coming age of complete, accurate, and ubiquitous proteomes. Mol. Cell 49, 583-590.
-
(2013)
Mol. Cell
, vol.49
, pp. 583-590
-
-
Mann, M.1
Kulak, N.A.2
Nagaraj, N.3
Cox, J.4
-
21
-
-
84876148755
-
Protein analysis by shotgun/bottom-up proteomics
-
Zhang, Y., Fonslow, B. R., Shan, B., Baek, M., and Yates, J. R. (2013) Protein Analysis by Shotgun/Bottom-up Proteomics. Chem. Rev. 113, 2343-2394.
-
(2013)
Chem. Rev.
, vol.113
, pp. 2343-2394
-
-
Zhang, Y.1
Fonslow, B.R.2
Shan, B.3
Baek, M.4
Yates, J.R.5
-
22
-
-
68949206409
-
Applying mass spectrometry-based proteomics to genetics, genomics, and network biology
-
Gstaiger, M., and Aebersold, R. (2009) Applying mass spectrometry-based proteomics to genetics, genomics, and network biology. Nat. Rev. Genet. 10, 617-627.
-
(2009)
Nat. Rev. Genet.
, vol.10
, pp. 617-627
-
-
Gstaiger, M.1
Aebersold, R.2
-
23
-
-
84862660561
-
Computational and informatics strategies for identification of specific protein interaction partners in affinity purification mass spectrometry experiments
-
Nesvizhskii, A. I. (2012) Computational and informatics strategies for identification of specific protein interaction partners in affinity purification mass spectrometry experiments. Proteomics 12, 1639-1655.
-
(2012)
Proteomics
, vol.12
, pp. 1639-1655
-
-
Nesvizhskii, A.I.1
-
24
-
-
0032828715
-
A generic protein purification method for protein complex characterization and proteome exploration
-
Rigaut, G., Shevchenko, A., Rutz, B., Wilm, M., Mann, M., and Séraphin, B. (1999) A generic protein purification method for protein complex characterization and proteome exploration. Nat. Biotechnol. 17, 7-9.
-
(1999)
Nat. Biotechnol.
, vol.17
, pp. 7-9
-
-
Rigaut, G.1
Shevchenko, A.2
Rutz, B.3
Wilm, M.4
Mann, M.5
Séraphin, B.6
-
25
-
-
33644670152
-
An integrated mass spectrometry-based proteomic approach: Quantitative analysis of tandem affinity-purified in vivo cross-linked protein complexes (QTAX) to decipher the 26 S proteasome-interacting network
-
Guerrero, C., Tagwerker, C., Kaiser, P., and Huang, L. (2006) An integrated mass spectrometry-based proteomic approach: quantitative analysis of tandem affinity-purified in vivo cross-linked protein complexes (QTAX) to decipher the 26 S proteasome-interacting network. Mol. Cell. Proteomics 5, 366-378.
-
(2006)
Mol. Cell. Proteomics
, vol.5
, pp. 366-378
-
-
Guerrero, C.1
Tagwerker, C.2
Kaiser, P.3
Huang, L.4
-
26
-
-
77955345941
-
Profiling of protein interaction networks of protein complexes using affinity purification and quantitative mass spectrometry
-
Kaake, R. M., Wang, X., and Huang, L. (2010) Profiling of protein interaction networks of protein complexes using affinity purification and quantitative mass spectrometry. Mol. Cell. Proteomics 9, 1650-1665.
-
(2010)
Mol. Cell. Proteomics
, vol.9
, pp. 1650-1665
-
-
Kaake, R.M.1
Wang, X.2
Huang, L.3
-
27
-
-
42349105213
-
Relative quantification of proteins in human cerebrospinal fluids by MS/MS using 6-plex isobaric tags
-
Dayon, L., Hainard, A., Licker, V., Turck, N., Kuhn, K., Hochstrasser, D. F., Burkhard, P. R., and Sanchez, J.-C. (2008) Relative quantification of proteins in human cerebrospinal fluids by MS/MS using 6-plex isobaric tags. Anal. Chem. 80, 2921-2931.
-
(2008)
Anal. Chem.
, vol.80
, pp. 2921-2931
-
-
Dayon, L.1
Hainard, A.2
Licker, V.3
Turck, N.4
Kuhn, K.5
Hochstrasser, D.F.6
Burkhard, P.R.7
Sanchez, J.-C.8
-
28
-
-
84867435739
-
CDKL5, a novel MYCN-repressed gene, blocks cell cycle, and promotes differentiation of neuronal cells
-
Valli, E., Trazzi, S., Fuchs, C., Erriquez, D., Bartesaghi, R., Perini, G., and Ciani, E. (2012) CDKL5, a novel MYCN-repressed gene, blocks cell cycle, and promotes differentiation of neuronal cells. Biochim. Biophys. Acta 1819, 1173-1185.
-
(2012)
Biochim. Biophys. Acta
, vol.1819
, pp. 1173-1185
-
-
Valli, E.1
Trazzi, S.2
Fuchs, C.3
Erriquez, D.4
Bartesaghi, R.5
Perini, G.6
Ciani, E.7
-
29
-
-
68549127159
-
Systematical optimization of reverse-phase chromatography for shotgun proteomics research articles
-
Xu, P., Duong, D. M., and Peng, J. (2009) Systematical optimization of reverse-phase chromatography for shotgun proteomics research articles. J. Proteome Res. 8, 3944-3950.
-
(2009)
J. Proteome Res.
, vol.8
, pp. 3944-3950
-
-
Xu, P.1
Duong, D.M.2
Peng, J.3
-
30
-
-
84922650471
-
Systematic optimization of long gradient chromatography mass spectrometry for deep analysis of brain proteome
-
Wang, H., Yang, Y., Li, Y., Bai, B., Wang, X., Tan, H., Liu, T., Beach, T. G., Peng, J., and Wu, Z. (2015) Systematic optimization of long gradient chromatography mass spectrometry for deep analysis of brain proteome. J. Proteome Res. 14, 829-838.
-
(2015)
J. Proteome Res.
, vol.14
, pp. 829-838
-
-
Wang, H.1
Yang, Y.2
Li, Y.3
Bai, B.4
Wang, X.5
Tan, H.6
Liu, T.7
Beach, T.G.8
Peng, J.9
Wu, Z.10
-
31
-
-
0037277179
-
Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: The yeast proteome
-
Peng, J., Elias, J. E., Thoreen, C. C., Licklider, L. J., and Gygi, S. P. (2003) Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: The yeast proteome. J. Proteome Res. 2, 43-50.
-
(2003)
J. Proteome Res.
, vol.2
, pp. 43-50
-
-
Peng, J.1
Elias, J.E.2
Thoreen, C.C.3
Licklider, L.J.4
Gygi, S.P.5
-
32
-
-
0041706156
-
A proteomics approach to understanding protein ubiquitination
-
Peng, J., Schwartz, D., Elias, J. E., Thoreen, C. C., Cheng, D., Marsischky, G., Roelofs, J., Finley, D., and Gygi, S. P. (2003) A proteomics approach to understanding protein ubiquitination. Nat. Biotechnol. 21, 921-926.
-
(2003)
Nat. Biotechnol.
, vol.21
, pp. 921-926
-
-
Peng, J.1
Schwartz, D.2
Elias, J.E.3
Thoreen, C.C.4
Cheng, D.5
Marsischky, G.6
Roelofs, J.7
Finley, D.8
Gygi, S.P.9
-
33
-
-
84928255180
-
JUMP: A tag-based database search tool for peptide identification with high sensitivity and accuracy
-
Wang, X., Li, Y., Wu, Z., Wang, H., Tan, H., and Peng, J. (2014) JUMP: A tag-based database search tool for peptide identification with high sensitivity and accuracy. Mol. Cell. Proteomics 13, 3663-3673.
-
(2014)
Mol. Cell. Proteomics
, vol.13
, pp. 3663-3673
-
-
Wang, X.1
Li, Y.2
Wu, Z.3
Wang, H.4
Tan, H.5
Peng, J.6
-
34
-
-
33749223143
-
The Kyoto encyclopedia of genes and genomes-KEGG
-
Wixon, J., and Kell, D. (2000) The Kyoto encyclopedia of genes and genomes-KEGG. Yeast 17, 48-55.
-
(2000)
Yeast
, vol.17
, pp. 48-55
-
-
Wixon, J.1
Kell, D.2
-
35
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
-
Huang, D. W., Sherman, B. T., and Lempicki, R. A. (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc. 4, 44-57.
-
(2009)
Nat. Protoc.
, vol.4
, pp. 44-57
-
-
Huang, D.W.1
Sherman, B.T.2
Lempicki, R.A.3
-
36
-
-
58549112996
-
Bioinformatics enrichment tools: Paths toward the comprehensive functional analysis of large gene lists
-
Huang, D. W., Sherman, B. T., and Lempicki, R. A. (2009) Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res. 37, 1-13.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 1-13
-
-
Huang, D.W.1
Sherman, B.T.2
Lempicki, R.A.3
-
37
-
-
58149193234
-
STRING 8- A global view on proteins and their functional interactions in 630 organisms
-
Jensen, L. J., Kuhn, M., Stark, M., Chaffron, S., Creevey, C., Muller, J., Doerks, T., Julien, P., Roth, A., Simonovic, M., Bork, P., and von Mering, C. (2009) STRING 8-a global view on proteins and their functional interactions in 630 organisms. Nucleic Acids Res. 37, D412-D416.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. D412-D416
-
-
Jensen, L.J.1
Kuhn, M.2
Stark, M.3
Chaffron, S.4
Creevey, C.5
Muller, J.6
Doerks, T.7
Julien, P.8
Roth, A.9
Simonovic, M.10
Bork, P.11
Von Mering, C.12
-
38
-
-
84908888137
-
Integrated approaches for analyzing U1-70K cleavage in Alzheimer's disease
-
Bai, B., Chen, P., Hales, C. M., Wu, Z., Pagala, V., High, A. A., Levey, A. I., Lah, J. J., and Peng, J. (2014) Integrated approaches for analyzing U1-70K cleavage in Alzheimer's disease. J. Proteome Res. 13, 4526-4534.
-
(2014)
J. Proteome Res.
, vol.13
, pp. 4526-4534
-
-
Bai, B.1
Chen, P.2
Hales, C.M.3
Wu, Z.4
Pagala, V.5
High, A.A.6
Levey, A.I.7
Lah, J.J.8
Peng, J.9
-
39
-
-
70350400852
-
A coated vesicle-associated kinase of 104 kDa (CVAK104) induces lysosomal degradation of frizzled 5 (Fzd5)
-
Terabayashi, T., Funato, Y., Fukuda, M., and Miki, H. (2009) A coated vesicle-associated kinase of 104 kDa (CVAK104) induces lysosomal degradation of frizzled 5 (Fzd5). J. Biol. Chem. 284, 26716-26724.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 26716-26724
-
-
Terabayashi, T.1
Funato, Y.2
Fukuda, M.3
Miki, H.4
-
40
-
-
84861616705
-
Regulation of CREB signaling through L-type Ca2+channels by Nipsnap-2
-
Brittain, J. M., Wang, Y., Wilson, S. M., and Khanna, R. (2012) Regulation of CREB signaling through L-type Ca2+channels by Nipsnap-2. Channels 6, 94-102.
-
(2012)
Channels
, vol.6
, pp. 94-102
-
-
Brittain, J.M.1
Wang, Y.2
Wilson, S.M.3
Khanna, R.4
-
41
-
-
84871547640
-
Ubiquitinspecific protease 9x deubiquitinates and stabilizes the spinal muscular atrophy protein-survival motor neuron
-
Han, K.-J., Foster, D. G., Zhang, N.-Y., Kanisha, K., Dzieciatkowska, M., Sclafani, R. a, Hansen, K. C., Peng, J., and Liu, C.-W. (2012) Ubiquitinspecific protease 9x deubiquitinates and stabilizes the spinal muscular atrophy protein-survival motor neuron. J. Biol. Chem. 287, 43741-43752.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 43741-43752
-
-
Han, K.-J.1
Foster, D.G.2
Zhang, N.-Y.3
Kanisha, K.4
Dzieciatkowska, M.5
Sclafani, R.A.6
Hansen, K.C.7
Peng, J.8
Liu, C.-W.9
-
42
-
-
84896768982
-
Mutations in USP9X are associated with X-linked intellectual disability and disrupt neuronal cell migration and growth
-
Homan, C. C., Kumar, R., Nguyen, L. S., Haan, E., Raymond, F. L., Abidi, F., Raynaud, M., Schwartz, C. E., Wood, S. a, Gecz, J., and Jolly, L. a (2014) Mutations in USP9X are associated with X-linked intellectual disability and disrupt neuronal cell migration and growth. Am. J. Hum. Genet. 94, 470-478.
-
(2014)
Am. J. Hum. Genet.
, vol.94
, pp. 470-478
-
-
Homan, C.C.1
Kumar, R.2
Nguyen, L.S.3
Haan, E.4
Raymond, F.L.5
Abidi, F.6
Raynaud, M.7
Schwartz, C.E.8
Wood, S.A.9
Gecz, J.10
Jolly, L.A.11
-
43
-
-
78650891913
-
Phosphodiesterase-4D knockout and RNAi-mediated knockdown enhance memory and increase hippocampal neurogenesis via increased cAMP signaling
-
Li, Y., Cheng, Y., Huang, Y., Conti, M., Wilson, S. P., Donnell, M. O., and Zhang, H. (2011) Phosphodiesterase-4D knockout and RNAi-mediated knockdown enhance memory and increase hippocampal neurogenesis via increased cAMP signaling. J. Neurosci. 31, 172-183.
-
(2011)
J. Neurosci.
, vol.31
, pp. 172-183
-
-
Li, Y.1
Cheng, Y.2
Huang, Y.3
Conti, M.4
Wilson, S.P.5
Donnell, M.O.6
Zhang, H.7
-
44
-
-
18844403842
-
Molecular mechanisms of dendritic spine development and remodeling
-
Ethell, I. M., and Pasquale, E. B. (2005) Molecular mechanisms of dendritic spine development and remodeling. Prog. Neurobiol. 75, 161-205.
-
(2005)
Prog. Neurobiol.
, vol.75
, pp. 161-205
-
-
Ethell, I.M.1
Pasquale, E.B.2
-
45
-
-
84879824271
-
Loss of Usp9x disrupts cortical architecture, hippocampal development, and TGF-mediated axonogenesis
-
Stegeman, S., Jolly, L. A., Premarathne, S., Gecz, J., Richards, L. J., Mackay-Sim, A., and Wood, S. a (2013) Loss of Usp9x disrupts cortical architecture, hippocampal development, and TGF-mediated axonogenesis. PLoS One 8, e68287.
-
(2013)
PLoS One
, vol.8
, pp. e68287
-
-
Stegeman, S.1
Jolly, L.A.2
Premarathne, S.3
Gecz, J.4
Richards, L.J.5
Mackay-Sim, A.6
Wood, S.A.7
-
46
-
-
77149147440
-
The catenin family at a glance
-
McCrea, P. D., and Gu, D. (2010) The catenin family at a glance. J. Cell Sci. 123, 637-642.
-
(2010)
J. Cell Sci.
, vol.123
, pp. 637-642
-
-
McCrea, P.D.1
Gu, D.2
-
47
-
-
84871837838
-
Loss of CDKL5 disrupts kinome profile and event-related potentials leading to autistic-like phenotypes in mice
-
Wang, I.-T. J., Allen, M., Goffin, D., Zhu, X., Fairless, A. H., Brodkin, E. S., Siegel, S. J., Marsh, E. D., Blendy, J. a, and Zhou, Z. (2012) Loss of CDKL5 disrupts kinome profile and event-related potentials leading to autistic-like phenotypes in mice. Proc. Natl. Acad. Sci. U.S.A. 109, 21516-21521.
-
(2012)
Proc. Natl. Acad. Sci. U.S.A.
, vol.109
, pp. 21516-21521
-
-
Wang, I.-T.J.1
Allen, M.2
Goffin, D.3
Zhu, X.4
Fairless, A.H.5
Brodkin, E.S.6
Siegel, S.J.7
Marsh, E.D.8
Blendy, J.A.9
Zhou, Z.10
-
48
-
-
84862211234
-
Molecular bases and clinical spectrum of early infantile epileptic encephalopathies
-
Tavyev Asher, Y. J., and Scaglia, F. (2012) Molecular bases and clinical spectrum of early infantile epileptic encephalopathies. Eur. J. Med. Genet. 55, 299-306.
-
(2012)
Eur. J. Med. Genet.
, vol.55
, pp. 299-306
-
-
Tavyev Asher, Y.J.1
Scaglia, F.2
-
49
-
-
77957196807
-
CDKL5, a protein associated with rett syndrome, regulates neuronal morphogenesis via Rac1 signaling
-
Chen, Q., Zhu, Y.-C., Yu, J., Miao, S., Zheng, J., Xu, L., Zhou, Y., Li, D., Zhang, C., Tao, J., and Xiong, Z.-Q. (2010) CDKL5, a protein associated with rett syndrome, regulates neuronal morphogenesis via Rac1 signaling. J. Neurosci. 30, 12777-12786.
-
(2010)
J. Neurosci.
, vol.30
, pp. 12777-12786
-
-
Chen, Q.1
Zhu, Y.-C.2
Yu, J.3
Miao, S.4
Zheng, J.5
Xu, L.6
Zhou, Y.7
Li, D.8
Zhang, C.9
Tao, J.10
Xiong, Z.-Q.11
-
50
-
-
84865773360
-
CDKL5 ensures excitatory synapse stability by reinforcing NGL- 1-PSD95 interaction in the postsynaptic compartment and is impaired in patient iPSC-derived neurons
-
Ricciardi, S., Ungaro, F., Hambrock, M., Rademacher, N., Stefanelli, G., Brambilla, D., Sessa, A., Magagnotti, C., Bachi, A., Giarda, E., Verpelli, C., Kilstrup-Nielsen, C., Sala, C., Kalscheuer, V. M., and Broccoli, V. (2012) CDKL5 ensures excitatory synapse stability by reinforcing NGL- 1-PSD95 interaction in the postsynaptic compartment and is impaired in patient iPSC-derived neurons. Nat. Cell Biol. 14, 1-15.
-
(2012)
Nat. Cell Biol.
, vol.14
, pp. 1-15
-
-
Ricciardi, S.1
Ungaro, F.2
Hambrock, M.3
Rademacher, N.4
Stefanelli, G.5
Brambilla, D.6
Sessa, A.7
Magagnotti, C.8
Bachi, A.9
Giarda, E.10
Verpelli, C.11
Kilstrup-Nielsen, C.12
Sala, C.13
Kalscheuer, V.M.14
Broccoli, V.15
-
51
-
-
84878462213
-
Palmitoylation-dependent CDKL5-PSD-95 interaction regulates synaptic targeting of CDKL5 and dendritic spine development
-
Zhu, Y.-C., Li, D., Wang, L., Lu, B., Zheng, J., Zhao, S.-L., Zeng, R., and Xiong, Z.-Q. (2013) Palmitoylation-dependent CDKL5-PSD-95 interaction regulates synaptic targeting of CDKL5 and dendritic spine development. Proc. Natl. Acad. Sci. 110, 9118-9123.
-
(2013)
Proc. Natl. Acad. Sci.
, vol.110
, pp. 9118-9123
-
-
Zhu, Y.-C.1
Li, D.2
Wang, L.3
Lu, B.4
Zheng, J.5
Zhao, S.-L.6
Zeng, R.7
Xiong, Z.-Q.8
-
52
-
-
84897085529
-
SAINTexpress: Improvements and additional features in significance analysis of INTeractome software
-
Teo, G., Liu, G., Zhang, J., Nesvizhskii, A. I., Gingras, A.-C., and Choi, H. (2014) SAINTexpress: Improvements and additional features in Significance Analysis of INTeractome software. J. Proteomics 100, 37-43.
-
(2014)
J. Proteomics
, vol.100
, pp. 37-43
-
-
Teo, G.1
Liu, G.2
Zhang, J.3
Nesvizhskii, A.I.4
Gingras, A.-C.5
Choi, H.6
-
53
-
-
0038385497
-
Affinity mass spectrometry-based approaches for the analysis of protein-protein interaction and complex mixtures of peptideligands
-
Rüdiger, A. H., Rüdiger, M., Carl, U. D., Chakraborty, T., Roepstorff, P., and Wehland, J. (1999) Affinity mass spectrometry-based approaches for the analysis of protein-protein interaction and complex mixtures of peptideligands. Anal. Biochem. 275, 162-170.
-
(1999)
Anal. Biochem.
, vol.275
, pp. 162-170
-
-
Rüdiger, A.H.1
Rüdiger, M.2
Carl, U.D.3
Chakraborty, T.4
Roepstorff, P.5
Wehland, J.6
-
54
-
-
84904465343
-
The Monkey King: A personal view of the long journey towards a proteomic Nirvana
-
Righetti, P. G. (2014) The Monkey King: A personal view of the long journey towards a proteomic Nirvana. J. Proteomics 107, 39-49.
-
(2014)
J. Proteomics
, vol.107
, pp. 39-49
-
-
Righetti, P.G.1
-
55
-
-
33845980603
-
Neuralized- 2 regulates a Notch ligand in cooperation with Mind bomb-1
-
Song, R., Koo, B.-K., Yoon, K.-J., Yoon, M.-J., Yoo, K.-W., Kim, H.-T., Oh, H.-J., Kim, Y.-Y., Han, J.-K., Kim, C.-H., and Kong, Y.-Y. (2006) Neuralized- 2 regulates a Notch ligand in cooperation with Mind bomb-1. J. Biol. Chem. 281, 36391-36400.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 36391-36400
-
-
Song, R.1
Koo, B.-K.2
Yoon, K.-J.3
Yoon, M.-J.4
Yoo, K.-W.5
Kim, H.-T.6
Oh, H.-J.7
Kim, Y.-Y.8
Han, J.-K.9
Kim, C.-H.10
Kong, Y.-Y.11
-
56
-
-
24344441942
-
Mind bomb1 is a ubiquitin ligase essential for mouse embryonic development and Notch signaling
-
Barsi, J. C., Rajendra, R., Wu, J. I., and Artzt, K. (2005) Mind bomb1 is a ubiquitin ligase essential for mouse embryonic development and Notch signaling. Mech. Dev. 122, 1106-1117.
-
(2005)
Mech. Dev.
, vol.122
, pp. 1106-1117
-
-
Barsi, J.C.1
Rajendra, R.2
Wu, J.I.3
Artzt, K.4
-
57
-
-
43449125262
-
Mind bomb 1-expressing intermediate progenitors generate notch signaling to maintain radial glial cells
-
Yoon, K.-J., Koo, B.-K., Im, S.-K., Jeong, H.-W., Ghim, J., Kwon, M.-C., Moon, J.-S., Miyata, T., and Kong, Y.-Y. (2008) Mind bomb 1-expressing intermediate progenitors generate notch signaling to maintain radial glial cells. Neuron 58, 519-531.
-
(2008)
Neuron
, vol.58
, pp. 519-531
-
-
Yoon, K.-J.1
Koo, B.-K.2
Im, S.-K.3
Jeong, H.-W.4
Ghim, J.5
Kwon, M.-C.6
Moon, J.-S.7
Miyata, T.8
Kong, Y.-Y.9
-
58
-
-
77955763757
-
Mib-Jag1-Notch signaling regulates patterning and structural roles of the notochord by controlling cell-fate decisions
-
Yamamoto, M., Morita, R., Mizoguchi, T., Matsuo, H., Isoda, M., Ishitani, T., Chitnis, A. B., Matsumoto, K., Crump, J. G., Hozumi, K., Yonemura, S., Kawakami, K., and Itoh, M. (2010) Mib-Jag1-Notch signaling regulates patterning and structural roles of the notochord by controlling cell-fate decisions. Development 137, 2527-2537.
-
(2010)
Development
, vol.137
, pp. 2527-2537
-
-
Yamamoto, M.1
Morita, R.2
Mizoguchi, T.3
Matsuo, H.4
Isoda, M.5
Ishitani, T.6
Chitnis, A.B.7
Matsumoto, K.8
Crump, J.G.9
Hozumi, K.10
Yonemura, S.11
Kawakami, K.12
Itoh, M.13
-
59
-
-
84855501946
-
Distinct intracellular motifs of Delta mediate its ubiquitylation and activation by Mindbomb1 and Neuralized
-
Daskalaki, A., Shalaby, N. A., Kux, K., Tsoumpekos, G., Tsibidis, G. D., Muskavitch, M. A. T., and Delidakis, C. (2011) Distinct intracellular motifs of Delta mediate its ubiquitylation and activation by Mindbomb1 and Neuralized. J. Cell Biol. 195, 1017-1031.
-
(2011)
J. Cell Biol.
, vol.195
, pp. 1017-1031
-
-
Daskalaki, A.1
Shalaby, N.A.2
Kux, K.3
Tsoumpekos, G.4
Tsibidis, G.D.5
Muskavitch, M.A.T.6
Delidakis, C.7
-
60
-
-
84859650020
-
Intralineage directional Notch signaling regulates self-renewal and differentiation of asymmetrically dividing radial glia
-
Dong, Z., Yang, N., Yeo, S.-Y., Chitnis, A., and Guo, S. (2012) Intralineage directional Notch signaling regulates self-renewal and differentiation of asymmetrically dividing radial glia. Neuron 74, 65-78.
-
(2012)
Neuron
, vol.74
, pp. 65-78
-
-
Dong, Z.1
Yang, N.2
Yeo, S.-Y.3
Chitnis, A.4
Guo, S.5
-
61
-
-
84862120880
-
Notch ligand endocytosis generates mechanical pulling force dependent on dynamin, epsins, and actin
-
Meloty-Kapella, L., Shergill, B., Kuon, J., Botvinick, E., and Weinmaster, G. (2012) Notch ligand endocytosis generates mechanical pulling force dependent on dynamin, epsins, and actin. Dev. Cell 22, 1299-1312.
-
(2012)
Dev. Cell
, vol.22
, pp. 1299-1312
-
-
Meloty-Kapella, L.1
Shergill, B.2
Kuon, J.3
Botvinick, E.4
Weinmaster, G.5
-
62
-
-
33746960721
-
A critical role for endocytosis in Wnt signaling
-
Blitzer, J. T., and Nusse, R. (2006) A critical role for endocytosis in Wnt signaling. BMC Cell Biol. 7, 28.
-
(2006)
BMC Cell Biol
, vol.7
, pp. 28
-
-
Blitzer, J.T.1
Nusse, R.2
-
63
-
-
0035797521
-
Regulation of dendritic spine morphology by SPAR, a PSD-95-associated RapGAP
-
Pak, D. T., Yang, S., Rudolph-Correia, S., Kim, E., and Sheng, M. (2001) Regulation of dendritic spine morphology by SPAR, a PSD-95-associated RapGAP. Neuron 31, 289-303.
-
(2001)
Neuron
, vol.31
, pp. 289-303
-
-
Pak, D.T.1
Yang, S.2
Rudolph-Correia, S.3
Kim, E.4
Sheng, M.5
-
64
-
-
79960404131
-
ΒCaMKII plays a nonenzymatic role in hippocampal synaptic plasticity and learning by targeting αCaMKII to synapses
-
Borgesius, N. Z., van Woerden, G. M., Buitendijk, G. H. S., Keijzer, N., Jaarsma, D., Hoogenraad, C. C., and Elgersma, Y. (2011) βCaMKII plays a nonenzymatic role in hippocampal synaptic plasticity and learning by targeting αCaMKII to synapses. J. Neurosci. 31, 10141-10148.
-
(2011)
J. Neurosci.
, vol.31
, pp. 10141-10148
-
-
Borgesius, N.Z.1
Van Woerden, G.M.2
Buitendijk, G.H.S.3
Keijzer, N.4
Jaarsma, D.5
Hoogenraad, C.C.6
Elgersma, Y.7
-
65
-
-
54049091941
-
Neuroligins and neurexins link synaptic function to cognitive disease
-
Südhof, T. C. (2008) Neuroligins and neurexins link synaptic function to cognitive disease. Nature 455, 903-911.
-
(2008)
Nature
, vol.455
, pp. 903-911
-
-
Südhof, T.C.1
-
66
-
-
84903885705
-
Loss of CDKL5 impairs survival and dendritic growth of newborn neurons by altering AKT/GSK-3- signaling
-
Fuchs, C., Trazzi, S., Torricella, R., Viggiano, R., De Franceschi, M., Amendola, E., Gross, C., Calzà, L., Bartesaghi, R., and Ciani, E. (2014) Loss of CDKL5 impairs survival and dendritic growth of newborn neurons by altering AKT/GSK-3- signaling. Neurobiol. Dis. 70, 53-68.
-
(2014)
Neurobiol. Dis.
, vol.70
, pp. 53-68
-
-
Fuchs, C.1
Trazzi, S.2
Torricella, R.3
Viggiano, R.4
De Franceschi, M.5
Amendola, E.6
Gross, C.7
Calzà, L.8
Bartesaghi, R.9
Ciani, E.10
-
67
-
-
71849094595
-
Early-onset seizure variant of Rett syndrome: Definition of the clinical diagnostic criteria
-
Artuso, R., Mencarelli, M. A., Polli, R., Sartori, S., Ariani, F., Pollazzon, M., Marozza, A., Cilio, M. R., Specchio, N., Vigevano, F., Vecchi, M., Boniver, C., Dalla Bernardina, B., Parmeggiani, A., Buoni, S., Hayek, G., Mari, F., Renieri, A., and Murgia, A. (2010) Early-onset seizure variant of Rett syndrome: definition of the clinical diagnostic criteria. Brain Dev. 32, 17-24.
-
(2010)
Brain Dev
, vol.32
, pp. 17-24
-
-
Artuso, R.1
Mencarelli, M.A.2
Polli, R.3
Sartori, S.4
Ariani, F.5
Pollazzon, M.6
Marozza, A.7
Cilio, M.R.8
Specchio, N.9
Vigevano, F.10
Vecchi, M.11
Boniver, C.12
Dalla Bernardina, B.13
Parmeggiani, A.14
Buoni, S.15
Hayek, G.16
Mari, F.17
Renieri, A.18
Murgia, A.19
-
68
-
-
84874104782
-
The CDKL5 disorder is an independent clinical entity associated with early-onset encephalopathy
-
Fehr, S., Wilson, M., Downs, J., Williams, S., Murgia, A., Sartori, S., Vecchi, M., Ho, G., Polli, R., Psoni, S., Bao, X., de Klerk, N., Leonard, H., and Christodoulou, J. (2013) The CDKL5 disorder is an independent clinical entity associated with early-onset encephalopathy. Eur. J. Hum. Genet. 21, 266-273.
-
(2013)
Eur. J. Hum. Genet.
, vol.21
, pp. 266-273
-
-
Fehr, S.1
Wilson, M.2
Downs, J.3
Williams, S.4
Murgia, A.5
Sartori, S.6
Vecchi, M.7
Ho, G.8
Polli, R.9
Psoni, S.10
Bao, X.11
De Klerk, N.12
Leonard, H.13
Christodoulou, J.14
|