Identification of human single-chain antibodies with broad reactivity for noroviruses

Protein Engineering, Design and Selection

Volumn 27, Issue 10, 2014, Pages 339-349

  Huang, Wanzhi ^a   Samanta, Moumita ^a   Crawford, Sue E ^a   Estes, Mary K ^a   Neill, Frederick H ^a   Atmar, Robert L ^a   Palzkill, Timothy ^a   Burton, Dennis ^b  

^a BAYLOR COLLEGE OF MEDICINE   (United States)

^b NONE

Author keywords

Antibody library; Diagnostics; Norovirus; Phage display; Single chain antibody

Indexed keywords

CARBOHYDRATES; CLONING; PHAGE DISPLAY; PLASMA DIAGNOSTICS; VIRUSES;

ANTIBODY LIBRARY; ENZYME LINKED IMMUNOSORBENT ASSAY; NEGATIVE CONTROL; NOROVIRUS; PHAGE DISPLAY LIBRARIES; SINGLE-CHAIN ANTIBODIES; VIRUS-LIKE PARTICLES; VP1 CAPSID PROTEINS;

ANTIBODIES;

CAPSID PROTEIN; CARBOHYDRATE; GLUTATHIONE TRANSFERASE; SINGLE CHAIN FRAGMENT VARIABLE ANTIBODY; PEPTIDE LIBRARY; PROTEIN BINDING; VIRUS ANTIBODY;

BINDING SITE; CONFERENCE PAPER; CONTROLLED STUDY; ENZYME LINKED IMMUNOSORBENT ASSAY; FECES ANALYSIS; IMMUNOBLOTTING; NONHUMAN; NOROVIRUS; PRIORITY JOURNAL; SITE DIRECTED MUTAGENESIS; SURFACE PLASMON RESONANCE; VIRUS LIKE AGENT; AMINO ACID SEQUENCE; ANTIBODY COMBINING SITE; CHEMISTRY; ESCHERICHIA COLI; HUMAN; IMMUNOLOGY; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR GENETICS; PEPTIDE LIBRARY; VIRION;

AMINO ACID SEQUENCE; ANTIBODIES, VIRAL; BINDING SITES, ANTIBODY; ESCHERICHIA COLI; HUMANS; MOLECULAR SEQUENCE DATA; NOROVIRUS; PEPTIDE LIBRARY; PROTEIN BINDING; SINGLE-CHAIN ANTIBODIES; VIRION;

EID: 84936760115     PISSN: 17410126     EISSN: 17410134     Source Type: Journal    
DOI: 10.1093/protein/gzu023     Document Type: Conference Paper

References (56)

1. Amann, E., Brosius J. and Ptashne, M. (1983) Gene, 25, 167-178.
2. Atmar, R.L. and Estes, M.K. (2001) Clin. Microbiol. Rev., 14, 15-37.
3. Atmar, R.L. and Estes, M.K. (2006) Gastroenterol. Clin. N. Am., 35, 275-290.
4. Atmar, R.L., Opekun, A.R., Gilger, M.A., Estes, M.K., Crawford, S.E., Neill, F.H. and Graham, D.Y. (2008)Emerg. Infect. Dis., 14, 1553-1557.
5. Atmar, R.L., Opekun, A.R., Gilger, MA., et al. (2014) J. Infect. Dis., 209, 1016-1022.
6. Bertolotti-Ciarlet, A., White, L.J., Chen, R., Prasad, B.V.V. and Estes, M.K. (2002) J. Virol, 76, 4044-4055.
7. Blanton, L.H., Adams, S.M., Beard, R.S., Wei, G., Bulens, S.N., Widdowson, MA., Glass, R.I. and Monroe, S.S. (2006) J. Infect. Dis., 193, 413-421.
8. Bradford, M.M. (1976) Anal. Biochem., 72, 248-254.
9. Bu, W., Mamedova, A., Tan, M., Xia, M., Jiang, X. and Hedge, R.S. (2008) J. Virol., 82, 5340-5347.
10. Bull, RA, Tu, E.T., McIver, C.J., Rawlinson, W.D. and White, PA. (2006) J. Clin. Microbiol., 44, 327-333.
11. Cao, S., Lou, Z., Tan, M., et al. (2007) J. Virol., 81, 5949-5957.
12. Chen, R., Neill J.D., Noel, J.S., Hutson, A.M., Glass, R.I., Estes, M.K. and Prasad, B.V.V. (2004) J. Virol., 78, 6469-6479.
13. Choi J.M., Hutson, A.M., Estes, M.K. and Prasad, B.V.V. (2008) Proc. Natl Acad. Sci. USA, 105, 9175-9180.
14. Crawford, S.E., Patel, D.G., Cheng, E., Berkova, Z., Hyser, J.M., Ciarlet, M., Finegold, M.J., Conner, M.E. and Estes, M.K. (2006) J. Virol., 80, 4820-4832.
15. de Bruin, E., Duizer, E., Vennema, H. and Koopmans, M.P.G. (2006) J. Virol. Methods, 137, 259-264.
16. de Wildt, R.M.T., Mundy, C.R., Gorick, B.D. and Tomlinson, I.M. (2000) Nat. Biotechnol., 18, 989-994.
17. Debbink, K., Lindesmith, L.C, Donaldson, E.F. and Baric, R.S. (2012) PLoS Pathog., 8, e1002921.
18. Deshayes, K., Schaffer, M.L., Skelton, N.J., Nakamura, G.R., Kadkhodayan, S. and Sidhu, S.S. (2002) Chem. Biol., 9, 495-505.
19. Donaldson, E.F., Lindesmith, L.C, Lobue, A.D. and Baric, R.S. (2010) Nat. Rev. Microbiol., 8, 231-241.
20. Ettayebi, K. and Hardy, M.E. (2008) Virol. J., 5, 21.
21. Fankhauser, R.L., Monroe, S.S., Noel, J.S., Humphrey, C.D., Bresee, J.S., Parashar, U.D., Ando, T. and Glass, R.I. (2002) J. Infect. Dis., 193, 413-421.
22. Glass, R.I., Parashar, U.D. and Estes, M.K. (2009) N. Engl. J. Med., 361, 1776-1785.
23. Gray, J.J., Kohli, E., Ruggeri, F.M., et al. (2007) Clin. Vaccine Immunol., 14, 1349-1355.
24. Green, K.Y., Lew, J.F., Jiang, X., Kapikian, A.Z. and Estes, M.K. (1993) J. Clin. Microbiol., 31, 2185-2191.
25. Hale, A.D., Tanaka, T.N., Kitamoto, N., Ciarlet, M., Jiang, X., Takeda, N., Brown, D.W.G. and Estes, M.K. (2000) J. Clin. Microbiol., 38, 1656-1660.
26. Hansman, G.S., Natori, K., Shirato-Horikoshi, H., et al. (2006) J. Gen. Virol., 87, 909-919.
27. Hansman, G.S., Biertumpfel, C, Georgiev, I., McLellan J.S., Chen, L., Zhou, T., Katayama, K. and Kwong, P.D. (2011) J. Virol., 85, 6687-6701.
28. Hansman, G.S., Taylor, D.W., McLellan J.S., et al. (2012) J. Virol., 86, 3635-3646.
29. Hardy, M.E., Tanaka, T.N., Kitamoto, N., White, L.J., Ball, J.M., Jiang, X. and Estes, M.K. (1996) Virology, 217, 252-261.
30. Huang, P.W., Farkas, T., Zhong, W., Tan, M., Thornton, S., Morrow, A.L. and Jiang, X. (2005) J. Virol., 79, 6714-6722.
31. Hutson, A.M., Atmar, R.L., Marcus, D.M. and Estes, M.K. (2003) J. Virol., 77, 405-415.
32. Hutson, A.M., Atmar, R.L. and Estes, M.K. (2004) Trends Microbiol., 12, 279-287.
33. Jiang, X., Wang, M., Graham, D.Y. and Estes, M.K. (1992) J. Virol., 66, 6527-6532.
34. Jiang, X., Wang, J. and Estes, M.K. (1995) Arch. Virol., 140, 363-374.
35. Kageyama, T., Shinohara, M., Uchida, K., et al. (2004) J. Clin. Microbiol., 42, 2988-2995.
36. Kitamoto, N., Tanaka, T., Natori, K., Takeda, N., Nakata, S., Jiang, X. and Estes, M.K. (2002) J. Clin. Microbiol., 40, 2459-2465.
37. Koo, H.L., Neill, F.H., Estes, M.K., Munoz, F.M., Cameron, A., DuPont, H.L. and Atmar, R.L. (2013) J. Pediatr. Infect. Dis. Soc., 2, 57-60.
38. Kroneman, A., Vennema, H., Deforche, K., Avoort, H.v.d., Penaranda, S., Oberste, M.S., Vinje, J. and Koopmans, M. (2011) J. Clin. Virol., 51, 121-125.
39. Kroneman, A., Vega, E., Vennema, H., et al. (2013) Arch. Virol., in press.
40. Kubota, T., Kumagai, A., Ito, H., et al. (2012) J. Virol., 86, 11138-11150.
41. Laffly, E., Pelat, T., Cedrone, F., Blesa, S., Bedouelle, H. and Thullier, P. (2008) J. Mol. Biol., 378, 1094-1103.
42. Lindesmith, L.C., Beltramello, M., Donaldson, E.F., Corti, D., Swanstrom, J., Debbink, K., Lanzavecchia, A. and Baric, R.S. (2012) PLoS Pathog., 8, e1002705.
43. Michnick, S.W. and Sidhu, S.S. (2008) Nat. Chem. Biol., 4, 326-329.
44. Miersch, S. and Sidhu, S.S. (2012) Methods, 57, 486-498.
45. Parker, T.D., Kitamoto, N., Tanaka, T., Hutson, A.M. and Estes, M.K. (2005) J. Virol., 79, 7402-7409.
46. Prasad, B.V.V., Hardy, M.E., Dokland, T., Bella, J., Rossmann, M.G. and Estes, M.K. (1999) Science, 286, 287-290.
47. Rajpal, A., Beyaz, N., Haber, L., Cappuccilli, G., Yee, H., Bhatt, R.R., Takeuchi, T., Lerner, R.A. and Crea, R. (2005) Proc. Natl Acad. Sci. USA, 102, 8466-8471.
48. Richards, A.F., Lopman, B., Gunn, A., et al. (2003) J. Clin. Virol., 26, 109-115.
49. Rogers, J.D., Ajami, N.J., Fryszczyn, B.G., Estes, M.K., Atmar, R.L. and Palzkill, T. (2013) J. Clin. Microbiol., 51, 1803-1808.
50. Sakamaki, N., Ohiro, Y., Ito, M., Makinodan, M., Ohta, T., Suzuki, W., Takayasu, S. and Tsuge, H. (2012) Clin. Vaccine Immunol., 19, 1949-1954.
51. Scallan, E., Hoekstra, R.M., Angulo, F.J., Tauxe, R.V., Widdowson, M.-A., Roy, S.L., Jones, J.L. and Griffin, P.M. (2011) Emerg. Infect. Dis., 17, 7-15.
52. Sidhu, S.S. and Fellhouse, F.A. (2006) Nat. Chem. Biol., 2, 682-688.
53. Tan, M. and Jiang, X. (2005) Trends Microbiol., 13, 285-293.
54. Tan, M. and Jiang, X. (2010) PLoS Pathog., 6, e1000983.
55. Yoda, T., Suzuki, Y., Terano, Y., Yamazaki, K., Sakon, N., Kuzuguchi, T., Oda, H. and Tsukamoto, T. (2003) J. Clin. Microbiol., 41, 2367-2371.
56. Zheng, D.P., Ando, T., Fankhauser, R.L., Beard, R.S., Glass, R.I. and Monroe, S.S. (2006) Virology, 346, 312-323.