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Volumn 112, Issue 25, 2015, Pages 7785-7790

Mosaic genome of endobacteria in arbuscular mycorrhizal fungi: Transkingdom gene transfer in an ancient mycoplasma-fungus association

Author keywords

Arbuscular mycorrhizal fungi; Endobacteria; Horizontal gene transfer; Intracellular symbiont; Mycoplasma

Indexed keywords

BACTERIAL PROTEIN; REGULATOR PROTEIN;

EID: 84935007700     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1501540112     Document Type: Article
Times cited : (84)

References (41)
  • 1
    • 38649142473 scopus 로고    scopus 로고
    • The unseen majority: Soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems
    • van der Heijden MGA, Bardgett RD, van Straalen NM (2008) The unseen majority: Soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems. Ecol Lett 11(3):296-310.
    • (2008) Ecol Lett , vol.11 , Issue.3 , pp. 296-310
    • Van Der Heijden, M.G.A.1    Bardgett, R.D.2    Van Straalen, N.M.3
  • 3
    • 77954054888 scopus 로고    scopus 로고
    • The obligate endobacteria of arbuscular mycorrhizal fungi are ancient heritable components related to the Mollicutes
    • Naumann M, Schüßler A, Bonfante P (2010) The obligate endobacteria of arbuscular mycorrhizal fungi are ancient heritable components related to the Mollicutes. ISME J 4(7):862-871.
    • (2010) ISME J , vol.4 , Issue.7 , pp. 862-871
    • Naumann, M.1    Schüßler, A.2    Bonfante, P.3
  • 4
    • 0037214883 scopus 로고    scopus 로고
    • 'Candidatus glomeribacter gigasporarum' gen. nov., sp. nov., an endosymbiont of arbuscular mycorrhizal fungi
    • Bianciotto V, Lumini E, Bonfante P, Vandamme P (2003) 'Candidatus glomeribacter gigasporarum' gen. nov., sp. nov., an endosymbiont of arbuscular mycorrhizal fungi. Int J Syst Evol Microbiol 53(Pt 1):121-124.
    • (2003) Int J Syst Evol Microbiol , vol.53 , Issue.1 , pp. 121-124
    • Bianciotto, V.1    Lumini, E.2    Bonfante, P.3    Vandamme, P.4
  • 5
    • 0000734105 scopus 로고
    • Honey-coloured, sessile Endogone spores: II. Changes in fine structure during spore development
    • Mosse B (1970) Honey-coloured, sessile Endogone spores: II. Changes in fine structure during spore development. Arch Microbiol 74(2):129-145.
    • (1970) Arch Microbiol , vol.74 , Issue.2 , pp. 129-145
    • Mosse, B.1
  • 6
    • 84922820832 scopus 로고    scopus 로고
    • Endogone, one of the oldest plant-associated fungi, host unique Mollicutes-related endobacteria
    • Desirò A, Faccio A, Kaech A, Bidartondo MI, Bonfante P (2015) Endogone, one of the oldest plant-associated fungi, host unique Mollicutes-related endobacteria. New Phytol 205(4):1464-1472.
    • (2015) New Phytol , vol.205 , Issue.4 , pp. 1464-1472
    • Desirò, A.1    Faccio, A.2    Kaech, A.3    Bidartondo, M.I.4    Bonfante, P.5
  • 7
    • 84893015275 scopus 로고    scopus 로고
    • Detection of a novel intracellular microbiome hosted in arbuscular mycorrhizal fungi
    • Desirò A, et al. (2014) Detection of a novel intracellular microbiome hosted in arbuscular mycorrhizal fungi. ISME J 8(2):257-270.
    • (2014) ISME J , vol.8 , Issue.2 , pp. 257-270
    • Desirò, A.1
  • 8
    • 84355161747 scopus 로고    scopus 로고
    • The genome of the obligate endobacterium of an AM fungus reveals an interphylum network of nutritional interactions
    • Ghignone S, et al. (2012) The genome of the obligate endobacterium of an AM fungus reveals an interphylum network of nutritional interactions. ISME J 6(1):136-145.
    • (2012) ISME J , vol.6 , Issue.1 , pp. 136-145
    • Ghignone, S.1
  • 9
    • 27144465524 scopus 로고    scopus 로고
    • Pathogenic fungus harbours endosymbiotic bacteria for toxin production
    • Partida-Martinez LP, Hertweck C (2005) Pathogenic fungus harbours endosymbiotic bacteria for toxin production. Nature 437(7060):884-888.
    • (2005) Nature , vol.437 , Issue.7060 , pp. 884-888
    • Partida-Martinez, L.P.1    Hertweck, C.2
  • 10
    • 85006013314 scopus 로고    scopus 로고
    • Draft genome sequence of the betaproteobacterial endosymbiont associated with the fungus Mortierella elongata FMR23-6
    • -14
    • Fujimura R, et al. (2014) Draft genome sequence of the betaproteobacterial endosymbiont associated with the fungus Mortierella elongata FMR23-6. Genome Announc 2(6):e01272-14.
    • (2014) Genome Announc , vol.2 , Issue.6
    • Fujimura, R.1
  • 11
    • 84879028120 scopus 로고    scopus 로고
    • QualitySNPng: A user-friendly SNP detection and visualization tool
    • W1
    • Nijveen H, van Kaauwen M, Esselink DG, Hoegen B, Vosman B (2013) QualitySNPng: A user-friendly SNP detection and visualization tool. Nucleic Acids Res 41(web server issue, W1):W587-590.
    • (2013) Nucleic Acids Res , vol.41 , Issue.WEB SERVER ISSUE , pp. W587-W590
    • Nijveen, H.1    Van Kaauwen, M.2    Esselink, D.G.3    Hoegen, B.4    Vosman, B.5
  • 12
    • 84890285092 scopus 로고    scopus 로고
    • Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis
    • Tisserant E, et al. (2013) Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis. Proc Natl Acad Sci USA 110(50):20117-20122.
    • (2013) Proc Natl Acad Sci USA , vol.110 , Issue.50 , pp. 20117-20122
    • Tisserant, E.1
  • 13
    • 84893748588 scopus 로고    scopus 로고
    • Single nucleus genome sequencing reveals high similarity among nuclei of an endomycorrhizal fungus
    • Lin K, et al. (2014) Single nucleus genome sequencing reveals high similarity among nuclei of an endomycorrhizal fungus. PLoS Genet 10(1):e1004078.
    • (2014) PLoS Genet , vol.10 , Issue.1
    • Lin, K.1
  • 14
    • 0034665846 scopus 로고    scopus 로고
    • Glomalean fungi from the Ordovician
    • Redecker D, Kodner R, Graham LE (2000) Glomalean fungi from the Ordovician. Science 289(5486):1920-1921.
    • (2000) Science , vol.289 , Issue.5486 , pp. 1920-1921
    • Redecker, D.1    Kodner, R.2    Graham, L.E.3
  • 15
    • 0030088109 scopus 로고    scopus 로고
    • Isolation of Arabidopsis genes that differentiate between resistance responses mediated by the RPS2 and RPM1 disease resistance genes
    • Reuber TL, Ausubel FM (1996) Isolation of Arabidopsis genes that differentiate between resistance responses mediated by the RPS2 and RPM1 disease resistance genes. Plant Cell 8(2):241-249.
    • (1996) Plant Cell , vol.8 , Issue.2 , pp. 241-249
    • Reuber, T.L.1    Ausubel, F.M.2
  • 16
    • 0034254929 scopus 로고    scopus 로고
    • A framework for interpreting the leucine-rich repeats of the Listeria internalins
    • Marino M, Braun L, Cossart P, Ghosh P (2000) A framework for interpreting the leucine-rich repeats of the Listeria internalins. Proc Natl Acad Sci USA 97(16):8784-8788.
    • (2000) Proc Natl Acad Sci USA , vol.97 , Issue.16 , pp. 8784-8788
    • Marino, M.1    Braun, L.2    Cossart, P.3    Ghosh, P.4
  • 17
    • 0037524441 scopus 로고    scopus 로고
    • Fatal attraction: Nonself recognition and heterokaryon incompatibility in filamentous fungi
    • Glass NL, Kaneko I (2003) Fatal attraction: Nonself recognition and heterokaryon incompatibility in filamentous fungi. Eukaryot Cell 2(1):1-8.
    • (2003) Eukaryot Cell , vol.2 , Issue.1 , pp. 1-8
    • Glass, N.L.1    Kaneko, I.2
  • 19
    • 66749136930 scopus 로고    scopus 로고
    • Massive comparative genomic analysis reveals convergent evolution of specialized bacteria
    • Merhej V, Royer-Carenzi M, Pontarotti P, Raoult D (2009) Massive comparative genomic analysis reveals convergent evolution of specialized bacteria. Biol Direct 4(1):13.
    • (2009) Biol Direct , vol.4 , Issue.1 , pp. 13
    • Merhej, V.1    Royer-Carenzi, M.2    Pontarotti, P.3    Raoult, D.4
  • 20
    • 79959931985 scopus 로고    scopus 로고
    • HMMER web server: Interactive sequence similarity searching
    • Finn RD, Clements J, Eddy SR (2011) HMMER web server: Interactive sequence similarity searching. Nucleic Acids Res 39(web server issue, suppl 2):W29-W37.
    • (2011) Nucleic Acids Res , vol.39 , Issue.WEB SERVER ISSUE , pp. W29-W37
    • Finn, R.D.1    Clements, J.2    Eddy, S.R.3
  • 21
    • 56149093433 scopus 로고    scopus 로고
    • Role of xenobiotic transporters in bacterial drug resistance and virulence
    • Nishino K, Yamaguchi A (2008) Role of xenobiotic transporters in bacterial drug resistance and virulence. IUBMB Life 60(9):569-574.
    • (2008) IUBMB Life , vol.60 , Issue.9 , pp. 569-574
    • Nishino, K.1    Yamaguchi, A.2
  • 22
    • 77954338505 scopus 로고    scopus 로고
    • Regulation of the nitrogen transfer pathway in the arbuscular mycorrhizal symbiosis: Gene characterization and the coordination of expression with nitrogen flux
    • Tian C, et al. (2010) Regulation of the nitrogen transfer pathway in the arbuscular mycorrhizal symbiosis: Gene characterization and the coordination of expression with nitrogen flux. Plant Physiol 153(3):1175-1187.
    • (2010) Plant Physiol , vol.153 , Issue.3 , pp. 1175-1187
    • Tian, C.1
  • 23
    • 0034007308 scopus 로고    scopus 로고
    • Host-pathogen interactions in mycoplasma pathogenesis: Virulence and survival strategies of minimalist prokaryotes
    • Rosengarten R, et al. (2000) Host-pathogen interactions in mycoplasma pathogenesis: Virulence and survival strategies of minimalist prokaryotes. Int J Med Microbiol 290(1):15-25.
    • (2000) Int J Med Microbiol , vol.290 , Issue.1 , pp. 15-25
    • Rosengarten, R.1
  • 24
    • 84864529483 scopus 로고    scopus 로고
    • Group I intron-mediated transsplicing in mitochondria of Gigaspora rosea and a robust phylogenetic affiliation of arbuscular mycorrhizal fungi with Mortierellales
    • Nadimi M, Beaudet D, Forget L, Hijri M, Lang BF (2012) Group I intron-mediated transsplicing in mitochondria of Gigaspora rosea and a robust phylogenetic affiliation of arbuscular mycorrhizal fungi with Mortierellales. Mol Biol Evol 29(9):2199-2210.
    • (2012) Mol Biol Evol , vol.29 , Issue.9 , pp. 2199-2210
    • Nadimi, M.1    Beaudet, D.2    Forget, L.3    Hijri, M.4    Lang, B.F.5
  • 25
    • 34250341823 scopus 로고    scopus 로고
    • A higher-level phylogenetic classification of the Fungi
    • Hibbett DS, et al. (2007) A higher-level phylogenetic classification of the Fungi. Mycol Res 111(Pt 5):509-547.
    • (2007) Mycol Res , vol.111 , Issue.5 , pp. 509-547
    • Hibbett, D.S.1
  • 26
    • 84859192030 scopus 로고    scopus 로고
    • Ultrafast evolution and loss of CRISPRs following a host shift in a novel wildlife pathogen, Mycoplasma gallisepticum
    • Delaney NF, et al. (2012) Ultrafast evolution and loss of CRISPRs following a host shift in a novel wildlife pathogen, Mycoplasma gallisepticum. PLoS Genet 8(2):e1002511.
    • (2012) PLoS Genet , vol.8 , Issue.2
    • Delaney, N.F.1
  • 27
    • 26844438062 scopus 로고    scopus 로고
    • DNA repair in reduced genome: The Mycoplasma model
    • Carvalho FM, et al. (2005) DNA repair in reduced genome: The Mycoplasma model. Gene 360(2):111-119.
    • (2005) Gene , vol.360 , Issue.2 , pp. 111-119
    • Carvalho, F.M.1
  • 28
    • 84875858241 scopus 로고    scopus 로고
    • Mycoplasmas and their host: Emerging and re-emerging minimal pathogens
    • Citti C, Blanchard A (2013) Mycoplasmas and their host: Emerging and re-emerging minimal pathogens. Trends Microbiol 21(4):196-203.
    • (2013) Trends Microbiol , vol.21 , Issue.4 , pp. 196-203
    • Citti, C.1    Blanchard, A.2
  • 29
    • 34249650773 scopus 로고    scopus 로고
    • Being pathogenic, plastic, and sexual while living with a nearly minimal bacterial genome
    • Sirand-Pugnet P, et al. (2007) Being pathogenic, plastic, and sexual while living with a nearly minimal bacterial genome. PLoS Genet 3(5):e75.
    • (2007) PLoS Genet , vol.3 , Issue.5 , pp. e75
    • Sirand-Pugnet, P.1
  • 30
    • 36849045236 scopus 로고    scopus 로고
    • Evolution of mollicutes: Down a bumpy road with twists and turns
    • Sirand-Pugnet P, Citti C, Barré A, Blanchard A (2007) Evolution of mollicutes: Down a bumpy road with twists and turns. Res Microbiol 158(10):754-766.
    • (2007) Res Microbiol , vol.158 , Issue.10 , pp. 754-766
    • Sirand-Pugnet, P.1    Citti, C.2    Barré, A.3    Blanchard, A.4
  • 31
    • 84861684703 scopus 로고    scopus 로고
    • Exploitation of evolutionarily conserved amoeba and mammalian processes by Legionella
    • Al-Quadan T, Price CT, Abu Kwaik Y (2012) Exploitation of evolutionarily conserved amoeba and mammalian processes by Legionella. Trends Microbiol 20(6):299-306.
    • (2012) Trends Microbiol , vol.20 , Issue.6 , pp. 299-306
    • Al-Quadan, T.1    Price, C.T.2    Abu Kwaik, Y.3
  • 33
    • 3042803667 scopus 로고    scopus 로고
    • Cysteine proteases in phytopathogenic bacteria: Identification of plant targets and activation of innate immunity
    • Hotson A, Mudgett MB (2004) Cysteine proteases in phytopathogenic bacteria: Identification of plant targets and activation of innate immunity. Curr Opin Plant Biol 7(4):384-390.
    • (2004) Curr Opin Plant Biol , vol.7 , Issue.4 , pp. 384-390
    • Hotson, A.1    Mudgett, M.B.2
  • 34
    • 75749107844 scopus 로고    scopus 로고
    • The genome of the amoeba symbiont "Candidatus Amoebophilus asiaticus" reveals common mechanisms for host cell interaction among amoeba-associated bacteria
    • Schmitz-Esser S, et al. (2010) The genome of the amoeba symbiont "Candidatus Amoebophilus asiaticus" reveals common mechanisms for host cell interaction among amoeba-associated bacteria. J Bacteriol 192(4):1045-1057.
    • (2010) J Bacteriol , vol.192 , Issue.4 , pp. 1045-1057
    • Schmitz-Esser, S.1
  • 35
    • 33749987465 scopus 로고    scopus 로고
    • The 160-kilobase genome of the bacterial endosymbiont Carsonella
    • Nakabachi A, et al. (2006) The 160-kilobase genome of the bacterial endosymbiont Carsonella. Science 314(5797):267.
    • (2006) Science , vol.314 , Issue.5797 , pp. 267
    • Nakabachi, A.1
  • 36
    • 0035872855 scopus 로고    scopus 로고
    • The complete genome sequence of the murine respiratory pathogen Mycoplasma pulmonis
    • Chambaud I, et al. (2001) The complete genome sequence of the murine respiratory pathogen Mycoplasma pulmonis. Nucleic Acids Res 29(10):2145-2153.
    • (2001) Nucleic Acids Res , vol.29 , Issue.10 , pp. 2145-2153
    • Chambaud, I.1
  • 37
    • 44349099865 scopus 로고    scopus 로고
    • Comparative genome analysis of "Candidatus Phytoplasma australiense" (subgroup tuf-Australia I; rp-A) and "Ca. Phytoplasma asteris" Strains OY-M and AY-WB
    • Tran-Nguyen LTT, Kube M, Schneider B, Reinhardt R, Gibb KS (2008) Comparative genome analysis of "Candidatus Phytoplasma australiense" (subgroup tuf-Australia I; rp-A) and "Ca. Phytoplasma asteris" Strains OY-M and AY-WB. J Bacteriol 190(11):3979-3991.
    • (2008) J Bacteriol , vol.190 , Issue.11 , pp. 3979-3991
    • Tran-Nguyen, L.T.T.1    Kube, M.2    Schneider, B.3    Reinhardt, R.4    Gibb, K.S.5
  • 38
    • 84876580700 scopus 로고    scopus 로고
    • MicroScope - An integrated microbial resource for the curation and comparative analysis of genomic and metabolic data
    • Vallenet D, et al. (2013) MicroScope - an integrated microbial resource for the curation and comparative analysis of genomic and metabolic data. Nucleic Acids Res 41(Database issue):D636-D647.
    • (2013) Nucleic Acids Res , vol.41 , Issue.DATABASE ISSUE , pp. D636-D647
    • Vallenet, D.1
  • 39
    • 13744252890 scopus 로고    scopus 로고
    • MAFFT version 5: Improvement in accuracy of multiple sequence alignment
    • Katoh K, Kuma K, Toh H, Miyata T (2005) MAFFT version 5: Improvement in accuracy of multiple sequence alignment. Nucleic Acids Res 33(2):511-518.
    • (2005) Nucleic Acids Res , vol.33 , Issue.2 , pp. 511-518
    • Katoh, K.1    Kuma, K.2    Toh, H.3    Miyata, T.4
  • 40
    • 65449188232 scopus 로고    scopus 로고
    • Jalview Version 2 - A multiple sequence alignment editor and analysis workbench
    • Waterhouse AM, Procter JB, Martin DM, Clamp M, Barton GJ (2009) Jalview Version 2 - a multiple sequence alignment editor and analysis workbench. Bioinformatics 25(9):1189-1191.
    • (2009) Bioinformatics , vol.25 , Issue.9 , pp. 1189-1191
    • Waterhouse, A.M.1    Procter, J.B.2    Martin, D.M.3    Clamp, M.4    Barton, G.J.5
  • 41
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • Stamatakis A (2006) RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22(21):2688-2690.
    • (2006) Bioinformatics , vol.22 , Issue.21 , pp. 2688-2690
    • Stamatakis, A.1


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