SCOPUS 정보 검색 플랫폼

Analytical Chemistry

Volumn 87, Issue 12, 2015, Pages 6297-6302

Carbamidomethylation Side Reactions May Lead to Glycan Misassignments in Glycopeptide Analysis

(2) Darula, Zsuzsanna a Medzihradszky, Katalin F a,b

a INSTITUTE OF EXPERIMENTAL MEDICINE (Hungary)

b UNIVERSITY OF CALIFORNIA (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; CHAINS; DISSOCIATION; SEARCH ENGINES;

ACCURATE MASS MEASUREMENTS; AMINO ACID SEQUENCE; COLLISION INDUCED DISSOCIATION; COVALENT MODIFICATIONS; ELECTRON-TRANSFER DISSOCIATION; ELEMENTAL COMPOSITIONS; HIGHER-ENERGY C-TRAP DISSOCIATIONS; STRUCTURAL CHARACTERIZATION;

PEPTIDES;

CYSTEINE; GLYCOPEPTIDE; POLYSACCHARIDE;

ANIMAL; CHEMISTRY; ELECTRON TRANSPORT; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; HUMAN; METHYLATION; MOUSE; PROTEIN CONFORMATION; TANDEM MASS SPECTROMETRY;

ANIMALS; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; CYSTEINE; ELECTRON TRANSPORT; GLYCOPEPTIDES; HUMANS; METHYLATION; MICE; POLYSACCHARIDES; PROTEIN CONFORMATION; TANDEM MASS SPECTROMETRY;

EID: 84934886876 PISSN: 00032700 EISSN: 15206882 Source Type: Journal
DOI: 10.1021/acs.analchem.5b01121 Document Type: Article

Times cited : (21)

References (39)

1
- 30544439962
- Medzihradszky, K. F. Methods Enzymol. 2005, 405, 50-65
- (2005) Methods Enzymol. , vol.405 , pp. 50-65
- Medzihradszky, K.F.¹

2
- 67349266694
- Wis̈niewski, J. R.; Zougman, A.; Nagaraj, N.; Mann, M. Nat. Methods. 2009, 6, 359-362
- (2009) Nat. Methods. , vol.6 , pp. 359-362
- Wis̈niewski, J.R.¹ Zougman, A.² Nagaraj, N.³ Mann, M.⁴

3
- 84864117133
- Beck, F.; Burkhart, J. M.; Geiger, J.; Zahedi, R. P.; Sickmann, A. Methods Mol. Biol. 2012, 893, 101-113
- (2012) Methods Mol. Biol. , vol.893 , pp. 101-113
- Beck, F.¹ Burkhart, J.M.² Geiger, J.³ Zahedi, R.P.⁴ Sickmann, A.⁵

4
- 44949092745
- Arsene, C. G.; Ohlendorf, R.; Burkitt, W.; Pritchard, C.; Henrion, A.; OConnor, G.; Bunk, D. M.; Güttler, B. Anal. Chem. 2008, 80, 4154-4160
- (2008) Anal. Chem. , vol.80 , pp. 4154-4160
- Arsene, C.G.¹ Ohlendorf, R.² Burkitt, W.³ Pritchard, C.⁴ Henrion, A.⁵ Oconnor, G.⁶ Bunk, D.M.⁷ Güttler, B.⁸

5
- 0242291099
- Yu, Y. Q.; Gilar, M.; Lee, P. J.; Bouvier, E. S. P.; Gebler, J. C. Anal. Chem. 2003, 75, 6023-6028
- (2003) Anal. Chem. , vol.75 , pp. 6023-6028
- Yu, Y.Q.¹ Gilar, M.² Lee, P.J.³ Bouvier, E.S.P.⁴ Gebler, J.C.⁵

6
- 84899823697
- Gallien, S.; Bourmaud, A.; Domon, B. J. Proteome Res. 2014, 13, 2688-2695
- (2014) J. Proteome Res. , vol.13 , pp. 2688-2695
- Gallien, S.¹ Bourmaud, A.² Domon, B.³

7
- 0020071010
- Webster, D. M.; Thompson, E. O. Aust. J. Biol. Sci. 1982, 35, 125-135.2
- (1982) Aust. J. Biol. Sci. , vol.35 , pp. 125-1352
- Webster, D.M.¹ Thompson, E.O.²

8
- 0041695302
- Meza, J. E.; Scott, G. K.; Benz, C. C.; Baldwin, M. A. Anal. Biochem. 2003, 320, 21-31
- (2003) Anal. Biochem. , vol.320 , pp. 21-31
- Meza, J.E.¹ Scott, G.K.² Benz, C.C.³ Baldwin, M.A.⁴

9
- 0010388069
- Gundlach, H. G.; Moore, S.; Stein, W. H. J. Biol. Chem. 1959, 234, 1761-1764
- (1959) J. Biol. Chem. , vol.234 , pp. 1761-1764
- Gundlach, H.G.¹ Moore, S.² Stein, W.H.³

10
- 0028053010
- Jones, M. D.; Merewether, L. A.; Clogston, C. L.; Lu, H. S. Anal. Biochem. 1994, 216, 135-146
- (1994) Anal. Biochem. , vol.216 , pp. 135-146
- Jones, M.D.¹ Merewether, L.A.² Clogston, C.L.³ Lu, H.S.⁴

11
- 0034048758
- Lapko, V. N.; Smith, D. L.; Smith, J. B. J. Mass Spectrom. 2000, 35, 572-575
- (2000) J. Mass Spectrom. , vol.35 , pp. 572-575
- Lapko, V.N.¹ Smith, D.L.² Smith, J.B.³

12
- 0035416831
- Boja, E. S.; Fales, H. M. Anal. Chem. 2001, 73, 3576-3582
- (2001) Anal. Chem. , vol.73 , pp. 3576-3582
- Boja, E.S.¹ Fales, H.M.²

13
- 44449108277
- Nielsen, M. L.; Vermeulen, M.; Bonaldi, T.; Cox, J.; Moroder, L.; Mann, M. Nat. Methods 2008, 5, 459-460
- (2008) Nat. Methods , vol.5 , pp. 459-460
- Nielsen, M.L.¹ Vermeulen, M.² Bonaldi, T.³ Cox, J.⁴ Moroder, L.⁵ Mann, M.⁶

14
- 33746570234
- Larsen, M. R.; Trelle, M. B.; Thingholm, T. E.; Jensen, O. N. BioTechniques 2006, 40, 790-798
- (2006) BioTechniques , vol.40 , pp. 790-798
- Larsen, M.R.¹ Trelle, M.B.² Thingholm, T.E.³ Jensen, O.N.⁴

15
- 70349275888
- North, S. J.; Hitchen, P. G.; Haslam, S. M.; Dell, A. Curr. Opin. Struct. Biol. 2009, 19, 498-506
- (2009) Curr. Opin. Struct. Biol. , vol.19 , pp. 498-506
- North, S.J.¹ Hitchen, P.G.² Haslam, S.M.³ Dell, A.⁴

16
- 0038699625
- Zhang, H.; Li, X. J.; Martin, D. B.; Aebersold, R. Nat. Biotechnol. 2003, 21, 660-666
- (2003) Nat. Biotechnol. , vol.21 , pp. 660-666
- Zhang, H.¹ Li, X.J.² Martin, D.B.³ Aebersold, R.⁴

17
- 81155132242
- Schjoldager, K. T.; Vester-Christensen, M. B.; Goth, C. K.; Petersen, T. N.; Brunak, S.; Bennett, E. P.; Levery, S. B.; Clausen, H. J. Biol. Chem. 2011, 286, 40122-40132
- (2011) J. Biol. Chem. , vol.286 , pp. 40122-40132
- Schjoldager, K.T.¹ Vester-Christensen, M.B.² Goth, C.K.³ Petersen, T.N.⁴ Brunak, S.⁵ Bennett, E.P.⁶ Levery, S.B.⁷ Clausen, H.⁸

18
- 84912077456
- Srinivasan, S.; Romagnoli, M.; Bohm, A.; Sonenshein, G. E. J. Biol. Chem. 2014, 289, 33676-33688
- (2014) J. Biol. Chem. , vol.289 , pp. 33676-33688
- Srinivasan, S.¹ Romagnoli, M.² Bohm, A.³ Sonenshein, G.E.⁴

19
- 34548653719
- Kroslak, T.; Laforge, K. S.; Gianotti, R. J.; Ho, A.; Nielsen, D. A.; Kreek, M. J. J. Neurochem. 2007, 103, 77-87
- (2007) J. Neurochem. , vol.103 , pp. 77-87
- Kroslak, T.¹ Laforge, K.S.² Gianotti, R.J.³ Ho, A.⁴ Nielsen, D.A.⁵ Kreek, M.J.⁶

20
- 3042789073
- Syka, J. E.; Coon, J. J.; Schroeder, M. J.; Shabanowitz, J.; Hunt, D. F. Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 9528-9533
- (2004) Proc. Natl. Acad. Sci. U.S.A. , vol.101 , pp. 9528-9533
- Syka, J.E.¹ Coon, J.J.² Schroeder, M.J.³ Shabanowitz, J.⁴ Hunt, D.F.⁵

21
- 84887406672
- Trinidad, J. C.; Schoepfer, R.; Burlingame, A. L.; Medzihradszky, K. F. Mol. Cell. Proteomics 2013, 12, 3474-3488
- (2013) Mol. Cell. Proteomics , vol.12 , pp. 3474-3488
- Trinidad, J.C.¹ Schoepfer, R.² Burlingame, A.L.³ Medzihradszky, K.F.⁴

22
- 84890104706
- Parker, B. L.; Thaysen-Andersen, M.; Solis, N.; Scott, N. E.; Larsen, M. R.; Graham, M. E.; Packer, N. H.; Cordwell, S. J. J. Proteome Res. 2013, 12, 5791-5800
- (2013) J. Proteome Res. , vol.12 , pp. 5791-5800
- Parker, B.L.¹ Thaysen-Andersen, M.² Solis, N.³ Scott, N.E.⁴ Larsen, M.R.⁵ Graham, M.E.⁶ Packer, N.H.⁷ Cordwell, S.J.⁸

23
- 79960210781
- Darula, Z.; Chalkley, R. J.; Lynn, A.; Baker, P. R.; Medzihradszky, K. F. Amino Acids 2011, 41, 321-328
- (2011) Amino Acids , vol.41 , pp. 321-328
- Darula, Z.¹ Chalkley, R.J.² Lynn, A.³ Baker, P.R.⁴ Medzihradszky, K.F.⁵

24
- 84901068322
- Darula, Z.; Medzihradszky, K. F. J. Am. Soc. Mass Spectrom. 2014, 25, 977-987
- (2014) J. Am. Soc. Mass Spectrom. , vol.25 , pp. 977-987
- Darula, Z.¹ Medzihradszky, K.F.²

25
- 84924083711
- Medzihradszky, K. F.; Kaasik, K.; Chalkley, R. J. Anal. Chem. 2015, 87, 3064-3071
- (2015) Anal. Chem. , vol.87 , pp. 3064-3071
- Medzihradszky, K.F.¹ Kaasik, K.² Chalkley, R.J.³

26
- 84875521318
- Chapter, Unit
- Bern, M.; Kil, Y. J.; Becker, C. Curr. Protoc. Bioinf. 2012, Chapter 13, Unit 13.20.
- (2012) Curr. Protoc. Bioinf. , vol.13 , pp. 1320
- Bern, M.¹ Kil, Y.J.² Becker, C.³

27
- 84934951117
- submitted for publication
- Bern, M.; Kil, Y. L.; Medzihradszky, K. F.; Tang, W.; Bern, N.; Becker, C. J. Am. Soc. Mass Spectrom. 2015, submitted for publication
- (2015) J. Am. Soc. Mass Spectrom.
- Bern, M.¹ Kil, Y.L.² Medzihradszky, K.F.³ Tang, W.⁴ Bern, N.⁵ Becker, C.⁶

28
- 84864812302
- Trinidad, J. C.; Barkan, D. T.; Gulledge, B. F.; Thalhammer, A.; Sali, A.; Schoepfer, R.; Burlingame, A. L. Mol. Cell. Proteomics 2012, 11, 215-229
- (2012) Mol. Cell. Proteomics , vol.11 , pp. 215-229
- Trinidad, J.C.¹ Barkan, D.T.² Gulledge, B.F.³ Thalhammer, A.⁴ Sali, A.⁵ Schoepfer, R.⁶ Burlingame, A.L.⁷

29
- 80052472260
- Zhao, P.; Viner, R.; Teo, C. F.; Boons, G. J.; Horn, D.; Wells, L. J. Proteome Res. 2011, 10, 4088-4104
- (2011) J. Proteome Res. , vol.10 , pp. 4088-4104
- Zhao, P.¹ Viner, R.² Teo, C.F.³ Boons, G.J.⁴ Horn, D.⁵ Wells, L.⁶

30
- 0027205366
- Harris, R. J.; Spellman, M. W. Glycobiology 1993, 3, 219-224
- (1993) Glycobiology , vol.3 , pp. 219-224
- Harris, R.J.¹ Spellman, M.W.²

31
- 0025617140
- Biemann, K. Methods Enzymol. 1990, 193, 886-887
- (1990) Methods Enzymol. , vol.193 , pp. 886-887
- Biemann, K.¹

32
- 33747883123
- Chalkley, R. J.; Brinkworth, C. S.; Burlingame, A. L. J. Am. Soc. Mass Spectrom. 2006, 17, 1271-1274
- (2006) J. Am. Soc. Mass Spectrom. , vol.17 , pp. 1271-1274
- Chalkley, R.J.¹ Brinkworth, C.S.² Burlingame, A.L.³

33
- 0024206786
- Domon, B.; Costello, C. E. Glycoconjugate J. 1988, 5, 397-409
- (1988) Glycoconjugate J. , vol.5 , pp. 397-409
- Domon, B.¹ Costello, C.E.²

34
- 30544433136
- Peter-Katalinić, J. Methods Enzymol. 2005, 405, 139-171
- (2005) Methods Enzymol. , vol.405 , pp. 139-171
- Peter-Katalinić, J.¹

35
- 30544454698
- Medzihradszky, K. F. Methods Enzymol. 2005, 405, 116-138
- (2005) Methods Enzymol. , vol.405 , pp. 116-138
- Medzihradszky, K.F.¹

36
- 20744456284
- Ghiladi, R. A.; Knudsen, G. M.; Medzihradszky, K. F.; Ortiz de Montellano, P. R. J. Biol. Chem. 2005, 280, 22651-22663
- (2005) J. Biol. Chem. , vol.280 , pp. 22651-22663
- Ghiladi, R.A.¹ Knudsen, G.M.² Medzihradszky, K.F.³ Ortiz De Montellano, P.R.⁴

37
- 84922182266
- Medzihradszky, K. F.; Chalkley, R. J. Mass Spectrom. Rev. 2015, 34, 43-63
- (2015) Mass Spectrom. Rev. , vol.34 , pp. 43-63
- Medzihradszky, K.F.¹ Chalkley, R.J.²

38
- 84901776609
- Wu, S. W.; Pu, T. H.; Viner, R.; Khoo, K. H. Anal. Chem. 2014, 86, 5478-5486
- (2014) Anal. Chem. , vol.86 , pp. 5478-5486
- Wu, S.W.¹ Pu, T.H.² Viner, R.³ Khoo, K.H.⁴

39
- 84891784931
- Mayampurath, A.; Yu, C. Y.; Song, E.; Balan, J.; Mechref, Y.; Tang, H. Anal. Chem. 2014, 86, 453-63
- (2014) Anal. Chem. , vol.86 , pp. 453-463
- Mayampurath, A.¹ Yu, C.Y.² Song, E.³ Balan, J.⁴ Mechref, Y.⁵ Tang, H.⁶

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.