-
1
-
-
33748619206
-
An NMR perspective on enzyme dynamics
-
Boehr DD, Dyson HJ, Wright PE (2006) An NMR perspective on enzyme dynamics. Chem Rev 106(8):3055-3079
-
(2006)
Chem Rev
, vol.106
, Issue.8
, pp. 3055-3079
-
-
Boehr, D.D.1
Dyson, H.J.2
Wright, P.E.3
-
2
-
-
0035937443
-
Two-state allosteric behavior in a single-domain signaling protein
-
Volkman BF, Lipson D, Wemmer DE et al (2001) Two-state allosteric behavior in a single-domain signaling protein. Science 291(5512):2429-2433
-
(2001)
Science
, vol.291
, Issue.5512
, pp. 2429-2433
-
-
Volkman, B.F.1
Lipson, D.2
Wemmer, D.E.3
-
3
-
-
79551689721
-
Protein dynamics and allostery: An NMR view
-
Tzeng SR, Kalodimos CG (2011) Protein dynamics and allostery: an NMR view. Curr Opin Struct Biol 21(1):62-67
-
(2011)
Curr Opin Struct Biol
, vol.21
, Issue.1
, pp. 62-67
-
-
Tzeng, S.R.1
Kalodimos, C.G.2
-
4
-
-
0035967856
-
Solution-state NMR investigations of triosephosphate isomerase active site loop motion: Ligand release in relation to active site loop dynamics
-
Rozovsky S, Jogl G, Tong L et al (2001) Solution-state NMR investigations of triosephosphate isomerase active site loop motion: ligand release in relation to active site loop dynamics. J Mol Biol 310(1):271-280
-
(2001)
J Mol Biol
, vol.310
, Issue.1
, pp. 271-280
-
-
Rozovsky, S.1
Jogl, G.2
Tong, L.3
-
5
-
-
0141993702
-
Protein conformational dynamics probed by single-molecule electron transfer
-
Yang H, Luo G, Karnchanaphanurach P et al (2003) Protein conformational dynamics probed by single-molecule electron transfer. Science 302(5643):262-266
-
(2003)
Science
, vol.302
, Issue.5643
, pp. 262-266
-
-
Yang, H.1
Luo, G.2
Karnchanaphanurach, P.3
-
6
-
-
0033813064
-
Measuring conformational dynamics of biomolecules by single molecule fluorescence spectroscopy
-
Weiss S (2000) Measuring conformational dynamics of biomolecules by single molecule fluorescence spectroscopy. Nat Struct Biol 7(9):724-729
-
(2000)
Nat Struct Biol
, vol.7
, Issue.9
, pp. 724-729
-
-
Weiss, S.1
-
7
-
-
42449110311
-
Amide i two-dimensional infrared spectroscopy of proteins
-
Ganim Z, Chung HS, Smith AW et al (2008) Amide I two-dimensional infrared spectroscopy of proteins. Acc Chem Res 41(3):432-441
-
(2008)
Acc Chem Res
, vol.41
, Issue.3
, pp. 432-441
-
-
Ganim, Z.1
Chung, H.S.2
Smith, A.W.3
-
8
-
-
0344672542
-
Structure and dynamics of membrane proteins as studied by infrared spectroscopy
-
Arrondo JL, Goni FM (1999) Structure and dynamics of membrane proteins as studied by infrared spectroscopy. Prog Biophys Mol Biol 72(4):367-405
-
(1999)
Prog Biophys Mol Biol
, vol.72
, Issue.4
, pp. 367-405
-
-
Arrondo, J.L.1
Goni, F.M.2
-
9
-
-
9744270012
-
Insights into enzyme structure and dynamics elucidated by amide H/D exchange mass spectrometry
-
Busenlehner LS, Armstrong RN(2005) Insights into enzyme structure and dynamics elucidated by amide H/D exchange mass spectrometry. Arch Biochem Biophys 433(1):34-46
-
(2005)
Arch Biochem Biophys
, vol.433
, Issue.1
, pp. 34-46
-
-
Busenlehner, L.S.1
Armstrong, R.N.2
-
10
-
-
0027529263
-
Determination of amide hydrogen exchange by mass spectrometry: A new tool for protein structure elucidation
-
Zhang Z, Smith DL (1993) Determination of amide hydrogen exchange by mass spectrometry: a new tool for protein structure elucidation. Protein Sci 2(4):522-531
-
(1993)
Protein Sci
, vol.2
, Issue.4
, pp. 522-531
-
-
Zhang, Z.1
Smith, D.L.2
-
11
-
-
0037059032
-
Submolecular cooperativity produces multistate protein unfolding and refolding
-
Englander SW, Mayne L, Rumbley JN (2002) Submolecular cooperativity produces multistate protein unfolding and refolding. Biophys Chem 101-102:57-65
-
(2002)
Biophys Chem
, vol.101-102
, pp. 57-65
-
-
Englander, S.W.1
Mayne, L.2
Rumbley, J.N.3
-
12
-
-
79951887389
-
Hydrogen exchange mass spectrometry for studying protein structure and dynamics
-
Konermann L, Pan J, Liu YH (2011) Hydrogen exchange mass spectrometry for studying protein structure and dynamics. Chem Soc Rev 40(3):1224-1234
-
(2011)
Chem Soc Rev
, vol.40
, Issue.3
, pp. 1224-1234
-
-
Konermann, L.1
Pan, J.2
Liu, Y.H.3
-
13
-
-
0037214137
-
Protein hydrogen exchange mechanism: Local fluctuations
-
Maity H, Lim WK, Rumbley JN et al (2003) Protein hydrogen exchange mechanism: local fluctuations. Protein Sci 12(1):153-160
-
(2003)
Protein Sci
, vol.12
, Issue.1
, pp. 153-160
-
-
Maity, H.1
Lim, W.K.2
Rumbley, J.N.3
-
14
-
-
0020855355
-
Hydrogen exchange and structural dynamics of proteins and nucleic acids
-
Englander SW, Kallenbach NR (1983) Hydrogen exchange and structural dynamics of proteins and nucleic acids. Q Rev Biophys 16(4):521-655
-
(1983)
Q Rev Biophys
, vol.16
, Issue.4
, pp. 521-655
-
-
Englander, S.W.1
Kallenbach, N.R.2
-
15
-
-
0015514380
-
Primary structure effects on peptide group hydrogen exchange
-
Molday RS, Englander SW, Kallen RG (1972) Primary structure effects on peptide group hydrogen exchange. Biochemistry 11(2):150-158
-
(1972)
Biochemistry
, vol.11
, Issue.2
, pp. 150-158
-
-
Molday, R.S.1
Englander, S.W.2
Kallen, R.G.3
-
16
-
-
0027250665
-
Primary structure effects on peptide group hydrogen exchange
-
Bai Y, Milne JS, Mayne L et al (1993) Primary structure effects on peptide group hydrogen exchange. Proteins 17(1):75-86
-
(1993)
Proteins
, vol.17
, Issue.1
, pp. 75-86
-
-
Bai, Y.1
Milne, J.S.2
Mayne, L.3
-
17
-
-
0031018084
-
Probing the non-covalent structure of proteins by amide hydrogen exchange and mass spectrometry
-
Smith DL, Deng Y, Zhang Z (1997) Probing the non-covalent structure of proteins by amide hydrogen exchange and mass spectrometry. J Mass Spectrom 32(2):135-146
-
(1997)
J Mass Spectrom
, vol.32
, Issue.2
, pp. 135-146
-
-
Smith, D.L.1
Deng, Y.2
Zhang, Z.3
-
18
-
-
43149125442
-
Folding and assembly of large macromolecular complexes monitored by hydrogen-deuterium exchange and mass spectrometry
-
Suchanova B, Tuma R (2008) Folding and assembly of large macromolecular complexes monitored by hydrogen-deuterium exchange and mass spectrometry. Microb Cell Fact 7:12
-
(2008)
Microb Cell Fact
, vol.7
, pp. 12
-
-
Suchanova, B.1
Tuma, R.2
-
19
-
-
75749148378
-
Investigating solution-phase protein structure and dynamics by hydrogen exchange mass spectrometry
-
Chapter 17, Unit 17
-
Morgan CR, Engen JR (2009) Investigating solution-phase protein structure and dynamics by hydrogen exchange mass spectrometry. Curr Protoc Protein Sci 16:11-17, Chapter 17, Unit 17
-
(2009)
Curr Protoc Protein Sci
, vol.16
, pp. 11-17
-
-
Morgan, C.R.1
Engen, J.R.2
-
20
-
-
80052033624
-
Protein identification using MS/MS data
-
Cottrell JS (2011) Protein identification using MS/MS data. J Proteomics 74(10):1842-1851
-
(2011)
J Proteomics
, vol.74
, Issue.10
, pp. 1842-1851
-
-
Cottrell, J.S.1
-
21
-
-
79954629044
-
MSTools: Web based application for visualization and presentation of HXMS data
-
Kavan D, Man P (2011) MSTools: Web based application for visualization and presentation of HXMS data. Int J Mass Spectrom 302:53-58
-
(2011)
Int J Mass Spectrom
, vol.302
, pp. 53-58
-
-
Kavan, D.1
Man, P.2
-
22
-
-
79951518978
-
HDXanalyzer: A novel package for statistical analysis of protein structure dynamics
-
Liu S, Liu L, Uzuner U et al (2011) HDXanalyzer: a novel package for statistical analysis of protein structure dynamics. BMC Bioinformatics 12(Suppl 1):S43
-
(2011)
BMC Bioinformatics
, vol.12
, Issue.SUPPL.1
-
-
Liu, S.1
Liu, L.2
Uzuner, U.3
-
23
-
-
33751337111
-
Semiautomated data processing of hydrogen exchange mass spectra using HX-Express
-
Weis DD, Engen JR, Kass IJ (2006) Semiautomated data processing of hydrogen exchange mass spectra using HX-Express. J Am Soc Mass Spectrom 17(12):1700-1703
-
(2006)
J Am Soc Mass Spectrom
, vol.17
, Issue.12
, pp. 1700-1703
-
-
Weis, D.D.1
Engen, J.R.2
Kass, I.J.3
-
24
-
-
34249341670
-
The Deuterator: Software for the determination of backbone amide deuterium levels from H/D exchange MS data
-
Pascal BD, Chalmers MJ, Busby SA et al (2007) The Deuterator: software for the determination of backbone amide deuterium levels from H/D exchange MS data. BMC Bioinformatics 8:156
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 156
-
-
Pascal, B.D.1
Chalmers, M.J.2
Busby, S.A.3
-
25
-
-
0242386421
-
Use of different proteases working in acidic conditions to improve sequence coverage and resolution in hydrogen/deuterium exchange of large proteins
-
Cravello L, Lascoux D, Forest E (2003) Use of different proteases working in acidic conditions to improve sequence coverage and resolution in hydrogen/deuterium exchange of large proteins. Rapid Commun Mass Spectrom 17 (21):2387-2393
-
(2003)
Rapid Commun Mass Spectrom
, vol.17
, Issue.21
, pp. 2387-2393
-
-
Cravello, L.1
Lascoux, D.2
Forest, E.3
-
26
-
-
0028609328
-
Surfactant effects on protein structure examined by electrospray ionization mass spectrometry
-
Loo RR, Dales N, Andrews PC (1994) Surfactant effects on protein structure examined by electrospray ionization mass spectrometry. Protein Sci 3(11):1975-1983
-
(1994)
Protein Sci
, vol.3
, Issue.11
, pp. 1975-1983
-
-
Loo, R.R.1
Dales, N.2
Andrews, P.C.3
-
27
-
-
0036463721
-
Hydrogen exchange-mass spectrometry: Optimization of digestion conditions
-
Wang L, Pan H, Smith DL (2002) Hydrogen exchange-mass spectrometry: optimization of digestion conditions. Mol Cell Proteomics 1 (2):132-138
-
(2002)
Mol Cell Proteomics
, vol.1
, Issue.2
, pp. 132-138
-
-
Wang, L.1
Pan, H.2
Smith, D.L.3
-
28
-
-
30644469415
-
Molecular weight determination of peptides and proteins by ESI and MALDI
-
Strupat K (2005) Molecular weight determination of peptides and proteins by ESI and MALDI. Methods Enzymol 405:1-36
-
(2005)
Methods Enzymol
, vol.405
, pp. 1-36
-
-
Strupat, K.1
-
29
-
-
79954631125
-
Analysis of human ferrochelatase iron binding via amide hydrogen/deuterium exchange mass spectrometry
-
Asuru AP, Busenlehner LS (2011) Analysis of human ferrochelatase iron binding via amide hydrogen/deuterium exchange mass spectrometry. Intl J Mass Spectrom 302:76-84
-
(2011)
Intl J Mass Spectrom
, vol.302
, pp. 76-84
-
-
Asuru, A.P.1
Busenlehner, L.S.2
-
30
-
-
84866103277
-
Dissection of porphyrin-induced conformational dynamics in the heme biosynthesis enzyme ferrochelatase
-
Asuru AP, An M, Busenlehner LS (2012) Dissection of porphyrin-induced conformational dynamics in the heme biosynthesis enzyme ferrochelatase. Biochemistry 51(36): 7116-7127
-
(2012)
Biochemistry
, vol.51
, Issue.36
, pp. 7116-7127
-
-
Asuru, A.P.1
An, M.2
Busenlehner, L.S.3
-
31
-
-
33750282788
-
Mapping protein dynamics in catalytic intermediates of the redox-driven proton pump cytochrome c oxidase
-
Busenlehner LS, Salomonsson L, Brzezinski P et al (2006) Mapping protein dynamics in catalytic intermediates of the redox-driven proton pump cytochrome c oxidase. Proc Natl Acad Sci USA 103(42):15398-15403
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.42
, pp. 15398-15403
-
-
Busenlehner, L.S.1
Salomonsson, L.2
Brzezinski, P.3
-
32
-
-
4444316044
-
Stress sensor triggers conformational response of the integral membrane protein microsomal glutathione transferase1
-
Busenlehner LS, Codreanu SG, Holm PJ et al (2004) Stress sensor triggers conformational response of the integral membrane protein microsomal glutathione transferase1. Biochemistry 43(35):11145-11152
-
(2004)
Biochemistry
, vol.43
, Issue.35
, pp. 11145-11152
-
-
Busenlehner, L.S.1
Codreanu, S.G.2
Holm, P.J.3
|