On the walking mechanism of linear molecular motors

Advances in Experimental Medicine and Biology

Volumn 592, Issue , 2007, Pages 369-384

  Kinosita Jr , Kazuhiko ^a   Shiroguchi, Katsuyuki ^a   Ali, M Yusuf ^b   Adachi, Kengo ^a   Itoh, Hiroyasu ^c,d  

^a WASEDA UNIVERSITY   (Japan)

^b SHAHJALAL UNIVERSITY OF SCIENCE AND TECHNOLOGY   (Bangladesh)

^c CENTRAL RESEARCH LABORATORY   (Japan)

^d JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ACTIN; ADENOSINE TRIPHOSPHATE; KINESIN; MOLECULAR MOTOR; MYOSIN V;

ANISOTROPY; CONFERENCE PAPER; FLUORESCENCE; MICROTUBULE; PRIORITY JOURNAL; WALKING;

EID: 84934438068     PISSN: 00652598     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-4-431-38453-3_31     Document Type: Conference Paper

References (75)

1. Ali, M. Y., Uemura, S., Adachi, K., Itoh, H., Kinosita, K. Jr., and Ishiwata, S., 2002, Myosin V is a left-handed spiral motor on the right-handed actin helix, Nat. Struct. Biol. 9:464-467.
2. Ali, M. Y., Homma, K., Iwane, A. H., Adachi, K., Itoh, H., Kinosita, K. Jr., Yanagida, T., and Ikebe, M., 2004, Unconstrained steps of myosin VI appear longest among known molecular motors, Biophys. J. 86:3804-3810.
3. Altman, D., Sweeney, H. L., and Spudich, J. A., 2004, The mechanism of myosin VI translocation and its load-induced anchoring, Cell 116:737-749.
4. Asbury, C. L., Fehr, A. N., and Block, S. M., 2003, Kinesin moves by an asymmetric hand-over-hand mechanism, Science 302:2130-2134.
5. Block, S. M., Goldstein, L. S. B., and Schnapp, B. J., 1990, Bead movement by single kinesin molecules studied with optical tweezers, Nature 348:348-352.
6. Brady, S. T., 1985, A novel brain ATPase with properties expected for the fast axonal transport motor, Nature 317:73-75.
7. Burgess, S., Walker, M., Wang, F., Sellers, J. R., White, H. D., Knight, P. J., and Trinick, J., 2002, The prepower stroke conformation of myosin V, J. Cell Biol. 159:983-991.
8. Carter, N. J., and Cross, R. A., 2005, Mechanics of the kinesin step, Nature 435:308-312.
9. Cheney, R. E., O'Shea, M. K., Heuser, J. E., Coelho, M. V., Wolenski, J. S., Espreafico, E. M., Forscher, P., Larson, R. E., and Mooseker, M. S., 1993, Brain myosin-V is a two-headed unconventional myosin with motor activity, Cell 75:13-23.
10. Clemen, A. E.-M., Vilfan, M., Jaud, J., Zhang, J., Bärmann, M., and Rief, M., 2005, Force-dependent stepping kinetics of myosin-V, Biophys. J., 88:4402-4410.
11. Coureux, P.-D., Sweeney, H. L., and Houdusse, A., 2004, Three myosin V structures delineate essential features of chemo-mechanical transduction, EMBO J. 23:4527-4537.
12. Coureux, P.-D., Wells, A. L., Ménétrey, J., Yengo, C. M., Morris, C. A., Sweeney, H. L., and Houdusse, A., 2003, A structural state of the myosin V motor without bound nucleotide, Nature 425:419-423.
13. De La Cruz, E. M., Wells, A. L., Rosenfeld, S. S., Ostap, E. M., and Sweeney, H. L., 1999, The kinetic mechanism of myosin V, Proc. Natl. Acad. Sci. USA 96:13726-13731.
14. Endow, S. A., and Barker, D. S., 2003, Processive and nonprocessive models of kinesin movement, Annu. Rev. Physiol. 65:161-175.
15. Forkey, J. N., Quinlan, M. E., Shaw, M. A., Corrie, J. E. T., and Goldman, Y. E., 2003, Three-dimensional structural dynamics of myosin V by single-molecule fluorescence polarization, Nature 422:399-404.
16. Hackney, D. D., 1994, Evidence for alternating head catalysis by kinesin during microtubule-stimulated ATP hydrolysis, Proc. Natl. Acad. Sci. USA 91:6865-6869.
17. Hancock, W. O., and Howard, J., 1999, Kinesin's processivity results from mechanical and chemical coordination between the ATP hydrolysis cycles of the two motor domains, Proc. Natl. Acad. Sci. USA 96:13147-13152.
18. Holmes, K. C., Angert, I., Kull, F. J., Jahn, W., and Schröder, R. R., 2003, Electron cryo-microscopy shows how strong binding of myosin to actin releases nucleotide, Nature 425:423-427.
19. Houdusse, A., Kalabokis, V. N., Himmel, D., Szent-Györgyi, A. G., and Cohen, C., 1999, Atomic structure of scallop myosin subfragment S1 complexed with MgADP: a novel conformation of the myosin head, Cell 97, 459-470.
20. Houdusse, A., Szent-Györgyi, A. G., and Cohen, C., 2000, Three conformational states of scallop myosin S1, 2000, Proc. Natl. Acad. Sci. USA 97, 11238-11243.
21. Howard, J., Hudspeth, A. J., Vale, R. D., 1989, Movement of microtubules by single kinesin molecules, Nature 342:154-158.
22. Howard, J., 1996, The movement of kinesin along microtubules, Annu. Rev. Physiol. 58:703-729.
23. Hua, W., Chung, J., and Gelles, J., 2002, Distinguishing inchworm and hand-over-hand processive kinesin movement by neck rotation measurements, Science 295:844-848.
24. Huxley, A. F., and Simmons, R. M., 1971, Proposed mechanism of force generation in striated muscle, Nature 233:533-538.
25. Huxley, H. E., 1969, The mechanism of muscular contraction, Science 164:1356-1366.
26. Inoue, A., Saito, J., Ikebe, R., and Ikebe, M., 2002, Myosin IXb is a single-headed minus-end-directed processive motor, Nat. Cell Biol. 4:302-306.
27. Ishiwata, S., Kinosita, K. Jr., Yoshimura, H., and Ikegami, A., 1987, Rotational motions of myosin heads in myofibril studied by phosphorescence anisotropy decay measurements, J. Biol. Chem. 262:8314-8317.
28. Kaseda, K., Higuchi, H., and Hirose, K., 2003, Alternate fast and slow stepping of a heterodimeric kinesin molecule, Nat. Cell Biol. 5:1079-1082.
29. Kawaguchi, K., and Ishiwata, S., 2001, Nucleotide-dependent single- to double-headed binding of kinesin, Science 291:667-669.
30. Kellerman, K. A., and Miller, K. G., 1992, An unconventional myosin heavy chain gene from Drosophila melanogaster, J. Cell Biol. 119:823-834.
31. Kinosita, K. Jr., Ishiwata, S., Yoshimura, H., Asai, H., and Ikegami, A., 1984, Submicrosecond and microsecond rotational motions of myosin head in solution and in myosin synthetic filaments as revealed by time-resolved optical anisotropy decay measurements, Biochemistry 23:5963-5975.
32. Kinosita, K. Jr., Yasuda, R., Noji, H., Ishiwata, S., and Yoshida, M., 1998, F1-ATPase: a rotary motor made of a single molecule, Cell 93:21-24.
33. Kinosita, K. Jr., Adachi, K., and Itoh, H., 2004, Rotation of F1-ATPase: how an ATP-driven molecular machine may work, Annu. Rev. Biophys. Biomol. Struct. 33:245-268.
34. Kinosita, K. Jr., Ali, M. Y., Adachi, K., Shiroguchi, K., and Itoh, H., 2005, How two-foot molecular motors may walk, Adv. Exp. Med. Biol. 565:205-219.
35. Kozielski, F., Sack, S., Marx, A., Thormählen, M., Schönbrunn, E., Biou, V., Thompson, A., Mandelkow, E.-M., and Mandelkow, E., 1997, The crystal structure of dimeric kinesin and implications for microtubule-dependent motility, Cell 91:985-994.
36. Kull, F. J., Sablin, E. P., Lau, R., Fletterick, R. J., and Vale, R. D., 1996, Crystal structure of the kinesin motor domain reveals a structural similarity to myosin, Nature 380:550-555.
37. Li, Y., Brown, J. H., Reshetnikova, L., Blazsek, A., Farkas, L., Nyitray, L., and Cohen, C., 2003, Visualization of an unstable coiled coil from the scallop myosin rod, Nature 424:341-345.
38. Mehta, A. D., Rock, R. S., Rief, M., Spudich, J. A., Mooseker, M. S., and Cheney, R. E., 1999, Myosin-V is a processive actin-based motor, Nature 400:590-593.
39. Mehta, A., 2001, Myosin learns to walk, J. Cell Sci. 114:1981-1998.
40. Ménétrey, J., Bahloul, A., Wells, A. L., Yengo, C. M., Morris, C. A., Sweeney, H. L., and Houdusse, A., 2005, The structure of the myosin VI motor reveals the mechanism of directionality reversal, Nature 435: 779-785.
41. Moore, J. R., Krementsova, E. B., Trybus, K. M., and Warshaw, D. M., 2001, Myosin V exhibits a high duty cycle and large unitary displacement, J. Cell Biol. 155:625-635.
42. Nishikawa, S., Homma, K., Komori, Y., Iwaki, M., Wazawa, T., Iwane, A. H., Saito, J., Ikebe, R., Katayama, E., Yanagida, T., and Ikebe, M., 2002, Class VI myosin moves processively along actin filaments backward with large steps, Biochem. Biophys. Res. Commun. 290:311-317.
43. Nitta, R., Kikkawa, M., Okada, Y., and Hirokawa, N., 2004, KIF1A alternately uses two loops to bind microtubules, Science 305:678-683.
44. Okada, Y., Higuchi, H., and Hirokawa, N., 2003, Processivity of the single-headed kinesin KIF1A through biased binding to tubulin, Nature 424:574-577.
45. Purcell, E. M., 1976, Life at low Reynolds number, http://brodylab.eng. uci.edu/~jpbrody/reynolds/lowpurcell.html.
46. Purcell, T. J., Sweeney, H. L., and Spudich, J. A., 2005, A force-dependent state controls the coordination of processive myosin V, Proc. Natl. Acad. Sci. USA 102:13873-13878.
47. Rayment, I., Rypniewski, W. R., Schmidt-Bäse, K., Smith, R., Tomchick, D. R., Benning, M. M., Winkelmann, D. A., Wesenberg, G., and Holden, H. M., 1993, Three-dimensional structure of myosin subfragment-1: a molecular motor, Science 261:50-58.
48. Reedy, M. K., Holmes, K. C., and Tregear, R. T., 1965, Induced changes in orientation of the cross-bridges of glycerinated insect flight muscle, Nature 207:1276-1280.
49. Rice, S., Cui, Y., Sindelar, C., Naber, N., Matuska, M., Vale, R., and Cooke, R., 2003, Thermodynamic properties of the kinesin neck-region docking to the catalytic core, Biophys. J. 84:1844-1854.
50. Rice, S., Lin, A. W., Safer, D., Hart, C. L., Naber, N., Carragher, B. O., Cain, S. M., Pechatnikova, E., Wilson-Kubalek, E. M., Whittaker, M., Pate, E., Cooke, R., Taylor, E. W., Milligan, R. A., and Vale, R. D., 1999, A structural change in the kinesin motor protein that drives motility, Nature 402:778-784.
51. Rief, M., Rock, R. S., Mehta, A. D., Mooseker, M. S., Cheney, R. E., and Spudich, J. A., 2000, Myosin-V stepping kinetics: A molecular model for processivity, Proc. Natl. Acad. Sci. USA 97:9482-9486.
52. Rock, R. S., Ramamurthy, B., Dunn, A. R., Beccafico, S., Rami, B. R., Morris, C., Spink, B. J., Franzini-Armstrong, C., Spudich, J. A., and Sweeney, H. L., 2005, A flexible domain is essential for the large step size and processivity of myosin VI, Mol. Cell 17:603-609.
53. Rock, R. S., Rice, S. E., Wells, A. L., Purcell, T. J., Spudich, J. A., and Sweeney, H. L., 2001, Myosin VI is a processive motor with a large step size, Proc. Natl. Acad. Sci. USA 98:13655-13659.
54. Sablin, E. P., and Fletterick, R. J., 2004, Coordination between motor domains in processive kinesins, J. Biol. Chem. 279:15707-15710.
55. Sakamoto, T., Amitani, I., Yokota, E., and Ando, T., 2000, Direct observation of processive movement by individual myosin V molecules, Biochem. Biophys. Res. Commun. 272:586-590.
56. Schliwa, M., and Woehlke, G., 2003, Molecular motors, Nature 422:759-765.
57. Shiroguchi, K., and Kinosita, K. Jr., 2005, Watching leg motion in walking myosin V, Biophys. J. 88:205A-205A.
58. Svoboda, K., Schmidt, C. F., Schnapp, B. J., and Block, S. M., 1993, Direct observation of kinesin stepping by optical trapping interferometry, Nature 365:721-727.
59. Tominaga, M., Kojima, H., Yokota, E., Orii, H., Nakamori, R., Katayama, E., Anson, M., Shimmen, T., and Oiwa, K., 2003, Higher plant myosin XI moves processively on actin with 35 nm steps at high velocity, EMBO J. 22:1263-1272.
60. Tsiavaliaris, G., Fujita-Becker, S., and Manstein, D. J., 2004, Molecular engineering of a backwards-moving myosin motor, Nature 427:558-561.
61. Turner, J., Anderson, R., Guo, J., Beraud, C., Fletterick, R., and Sakowicz, R., 2001, Crystal structure of the mitotic spindle kinesin Eg5 reveals a novel conformation of the neck-linker, J. Biol. Chem. 276: 25496-25502.
62. Uemura, S., and Ishiwata, S., 2003, Loading direction regulates the affinity of ADP for kinesin, Nat. Struct. Biol. 10:308-311.
63. Uemura, S., Kawaguchi, K., Yajima, J., Edamatsu, M., Toyoshima, Y. Y., and Ishiwata, S., 2002, Kinesin-microtubule binding depends on both nucleotide state and loading direction, Proc. Natl. Acad. Sci. USA 99:5977-5981.
64. Vale, R. D., 2003, Myosin V motor proteins: marching stepwise towards a mechanism, J. Cell Biol., 163: 445-450.
65. Vale, R. D., Reese, T. S., and Sheetz, M. P., 1985, Identification of a novel force-generating protein, kinesin, involved in microtubule-based motility, Cell 42:39-50.
66. Vale, R. D., and Milligan, R. A., 2000, The way things move: looking under the hood of molecular motor proteins, Science 288:88-95.
67. Veigel, C., Schmitz, S., Wang, F., and Sellers, J. R., 2005, Load-dependent kinetics of myosin-V can explain its high processivity, Nat. Cell Biol. 7:861-869.
68. Veigel, C., Wang, F., Bartoo, M. L., Sellers, J. R., and Molloy, J. E., 2002, The gated gait of the processive molecular motor, myosin V, Nat. Cell Biol. 4:59-65.
69. Visscher, K., Schnitzer, M. J., and Block, S. M., 1999, Single kinesin molecules studied with a molecular force clamp, Nature 400:184-189.
70. Walker, M. L., Burgess, S. A., Sellers, J. R., Wang, F., Hammer, J. A., Trinick, J., and Knight, P. J., 2000, Two-headed binding of a processive myosin to F-actin, Nature 405:804-807.
71. Warshaw, D. M., Kennedy, G. G., Work, S. S., Krementsova, E. B., Beck, S., and Trybus, K. M., 2005, Differential labeling of myosin V heads with quantum dots allows direct visualization of hand-over-hand processivity, Biophys. J. 88:L30-L32.
72. Wells, A. L., Lin, A. W., Chen, L.-Q., Safer, D., Cain, S. M., Hasson, T., Carragher, B. O., Milligan, R. A., and Sweeney, H. L., 1999, Myosin VI is an actin-based motor that moves backwards, Nature 401:505-508.
73. Yasuda, R., Noji, H., Yoshida, M., Kinosita, K. Jr., and Itoh, H., 2001, Resolution of distinct rotational substeps by submillisecond kinetic analysis of F1-ATPase, Nature 410:898-904.
74. Yildiz, A., Forkey, J. N., McKinney, S. A., Ha, T., Goldman, Y. E., and Selvin, P. R., 2003, Myosin V walks hand-over-hand: Single fl uorophore imaging with 1.5-nm localization, Science 300:2061-2065.
75. Yildiz, A., Tomishige, M., Vale, R. D., and Selvin, P. R., 2004, Kinesin walks hand-over-hand, Science 303:676-678.