메뉴 건너뛰기




Volumn 1111, Issue , 2014, Pages 165-181

Rational design of artificial ON-riboswitches

Author keywords

Aptamer; Biosensor; Cell free translation; Gene regulation; IRES; Riboswitch

Indexed keywords

MESSENGER RNA;

EID: 84934437422     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-62703-755-6_12     Document Type: Article
Times cited : (11)

References (15)
  • 1
    • 0037206833 scopus 로고    scopus 로고
    • Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression
    • Winkler W, Nahvi A, Breaker RR (2002) Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression. Nature 419:952-956
    • (2002) Nature , vol.419 , pp. 952-956
    • Winkler, W.1    Nahvi, A.2    Breaker, R.R.3
  • 2
    • 18744396047 scopus 로고    scopus 로고
    • Sensing small molecules by nascent RNA: A mechanism to control transcription in bacteria
    • Mironov AS, Gusarov I, Rafikov R et al (2002) Sensing small molecules by nascent RNA: A mechanism to control transcription in bacteria. Cell 111:747-756
    • (2002) Cell , vol.111 , pp. 747-756
    • Mironov, A.S.1    Gusarov, I.2    Rafikov, R.3
  • 3
    • 33845700514 scopus 로고    scopus 로고
    • Riboswitches as antibacterial drug targets
    • Blount KF, Breaker RR (2006) Riboswitches as antibacterial drug targets. Nat Biotechnol 24:1558-1564
    • (2006) Nat Biotechnol , vol.24 , pp. 1558-1564
    • Blount, K.F.1    Breaker, R.R.2
  • 4
    • 0346687595 scopus 로고    scopus 로고
    • The riboswitch control of bacterial metabolism
    • Nudler E, Mironov AS (2004) The riboswitch control of bacterial metabolism. Trends Biochem Sci 29:11-17
    • (2004) Trends Biochem Sci , vol.29 , pp. 11-17
    • Nudler, E.1    Mironov, A.S.2
  • 5
    • 34247242053 scopus 로고    scopus 로고
    • Structures of RNA switches: Insight into molecular recognition and tertiary structure
    • Schwalbe H, Buck J, Fürtig B et al (2007) Structures of RNA switches: insight into molecular recognition and tertiary structure. Angew Chem Int Ed 46:1212-1219
    • (2007) Angew Chem Int Ed , vol.46 , pp. 1212-1219
    • Schwalbe, H.1    Buck, J.2    Fürtig, B.3
  • 6
    • 10644250950 scopus 로고    scopus 로고
    • Structural basis for discriminative regulation of gene expression by adenine-and guanine-sensing mRNAs
    • Serganov A, Yuan Y-R, Pikovskaya O et al (2004) Structural basis for discriminative regulation of gene expression by adenine-and guanine-sensing mRNAs. Chem Biol 11:1729-1741
    • (2004) Chem Biol , vol.11 , pp. 1729-1741
    • Serganov, A.1    Yuan, Y.-R.2    Pikovskaya, O.3
  • 7
    • 79951519285 scopus 로고    scopus 로고
    • Rational design of artificial riboswitches based on ligand-dependent modulation of internal ribosome entry in wheat germ extract and their applications as label-free biosensors
    • Ogawa A (2011) Rational design of artificial riboswitches based on ligand-dependent modulation of internal ribosome entry in wheat germ extract and their applications as label-free biosensors. RNA 17:478-488
    • (2011) RNA , vol.17 , pp. 478-488
    • Ogawa, A.1
  • 8
    • 84856634400 scopus 로고    scopus 로고
    • Rational construction of eukaryotic OFF-riboswitches that downregulate internal ribosome entry site-mediated translation in response to their ligands
    • Ogawa A (2011) Rational construction of eukaryotic OFF-riboswitches that downregulate internal ribosome entry site-mediated translation in response to their ligands. Bioorg Med Chem Lett 22:1639-1642
    • (2011) Bioorg Med Chem Lett , vol.22 , pp. 1639-1642
    • Ogawa, A.1
  • 9
    • 0034681174 scopus 로고    scopus 로고
    • A highly efficient and robust cell-free protein synthesis system prepared from wheat embryos: Plants apparently contain a suicide system directed at ribosomes
    • Madin K, Sawasaki T, Ogasawara T, Endo Y (2000) A highly efficient and robust cell-free protein synthesis system prepared from wheat embryos: plants apparently contain a suicide system directed at ribosomes. Proc Natl Acad Sci U S A 97:559-564
    • (2000) Proc Natl Acad Sci U S A , vol.97 , pp. 559-564
    • Madin, K.1    Sawasaki, T.2    Ogasawara, T.3    Endo, Y.4
  • 10
    • 0032927056 scopus 로고    scopus 로고
    • Translation initiation at the CUU codon in mediated by the internal ribosome entry site of an insect picornalike virus in vitro
    • Sasaki J, Nakashima N (1999) Translation initiation at the CUU codon in mediated by the internal ribosome entry site of an insect picornalike virus in vitro. J Virol 73:1219-1226
    • (1999) J Virol , vol.73 , pp. 1219-1226
    • Sasaki, J.1    Nakashima, N.2
  • 11
    • 0242331742 scopus 로고    scopus 로고
    • Conditional rather than absolute requirements of the capsid coding sequence for initiation of methionine-independent translation in Plautia stali intestine virus
    • Shibuya N, Nishiyama T, Kanamori Y et al (2003) Conditional rather than absolute requirements of the capsid coding sequence for initiation of methionine-independent translation in Plautia stali intestine virus. J Virol 77:12002-12010
    • (2003) J Virol , vol.77 , pp. 12002-12010
    • Shibuya, N.1    Nishiyama, T.2    Kanamori, Y.3
  • 12
    • 33845335508 scopus 로고    scopus 로고
    • Structural basis for ribosome recruitment and manipulation by a viral IRES RNA
    • Pfingsten JS, Costantino DA, Kieft JS (2006) Structural basis for ribosome recruitment and manipulation by a viral IRES RNA. Science 314:1450-1454
    • (2006) Science , vol.314 , pp. 1450-1454
    • Pfingsten, J.S.1    Costantino, D.A.2    Kieft, J.S.3
  • 13
    • 70350542595 scopus 로고    scopus 로고
    • Biofunction-assisted sensors based on a new method for converting aptazyme activity into reporter protein expression with high efficiency in wheat germ extract
    • Ogawa A (2009) Biofunction-assisted sensors based on a new method for converting aptazyme activity into reporter protein expression with high efficiency in wheat germ extract. ChemBioChem 10:2465-2468
    • (2009) ChemBioChem , vol.10 , pp. 2465-2468
    • Ogawa, A.1
  • 14
    • 0028224199 scopus 로고
    • High-resolution molecular discrimination by RNA
    • Jenison RD, Gill SC, Pardi A, Polisky B (1994) High-resolution molecular discrimination by RNA. Science 263:1425-1429
    • (1994) Science , vol.263 , pp. 1425-1429
    • Jenison, R.D.1    Gill, S.C.2    Pardi, A.3    Polisky, B.4
  • 15
    • 2442626706 scopus 로고    scopus 로고
    • Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure
    • Mathews DH, Disney MD, Childs JL et al (2004) Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure. Proc Natl Acad Sci U S A 101:7287-7292
    • (2004) Proc Natl Acad Sci U S A , vol.101 , pp. 7287-7292
    • Mathews, D.H.1    Disney, M.D.2    Childs, J.L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.