Principal component analysis: A method for determining the essential dynamics of proteins

Methods in Molecular Biology

Volumn 1084, Issue , 2014, Pages 193-226

  David, Charles C ^a   Jacobs, Donald J ^a  

^a UNIVERSITY OF NORTH CAROLINA AT CHARLOTTE   (United States)

Author keywords

Collective motions; Conformational ensemble; Conformational sampling; Elastic network; Essential dynamics; Geometric simulation; Independent component analysis; Kernel PCA; Molecular dynamics simulation; PCA; Principal component analysis; Protein dynamics; Subspace analysis

Indexed keywords

PROTEIN;

ARTICLE; KERNEL METHOD; MOLECULAR DYNAMICS; PRINCIPAL COMPONENT ANALYSIS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN CONFORMATION; PROTEIN DOMAIN; PROTEIN FUNCTION; PROTEIN PROCESSING; PROTEIN STRUCTURE; SIMULATION; X RAY CRYSTALLOGRAPHY;

ALGORITHMS; MOLECULAR DYNAMICS SIMULATION; PRINCIPAL COMPONENT ANALYSIS; PROTEIN CONFORMATION; PROTEINS;

EID: 84934436648     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-62703-658-0_11     Document Type: Article

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