메뉴 건너뛰기




Volumn 128, Issue 12, 2015, Pages 2351-2362

Architectures of multisubunit complexes revealed by a visible immunoprecipitation assay using fluorescent fusion proteins

Author keywords

Anti GFP nanobody; BBSome; Exocyst; Fluorescent fusion protein; Membrane traffic; Protein protein interaction

Indexed keywords

EXOCYST; GREEN FLUORESCENT PROTEIN; NANOBODY; RED FLUORESCENT PROTEIN; BBIP1 PROTEIN, HUMAN; BBS4 PROTEIN, HUMAN; CARRIER PROTEIN; ENHANCED GREEN FLUORESCENT PROTEIN; MULTIPROTEIN COMPLEX; PHOTOPROTEIN; PROTEIN; PROTEIN BINDING; PROTEIN SUBUNIT; TTC8 PROTEIN, HUMAN; VESICULAR TRANSPORT PROTEIN;

EID: 84932108013     PISSN: 00219533     EISSN: 14779137     Source Type: Journal    
DOI: 10.1242/jcs.168740     Document Type: Article
Times cited : (139)

References (37)
  • 1
    • 84907882014 scopus 로고    scopus 로고
    • Single-molecule pull-down (SiMPull) for new-age biochemistry
    • Aggarwal, V. and Ha, T. (2014). Single-molecule pull-down (SiMPull) for new-age biochemistry. Bioessays 36, 1109-1119.
    • (2014) Bioessays , vol.36 , pp. 1109-1119
    • Aggarwal, V.1    Ha, T.2
  • 4
    • 0033558093 scopus 로고    scopus 로고
    • The exocyst is an effector for Sec4p, targeting secretory vesicles to sites of exocytosis
    • Guo, W., Roth, D., Walch-Solimena, C. and Novick, P. (1999). The exocyst is an effector for Sec4p, targeting secretory vesicles to sites of exocytosis. EMBO J. 18, 1071-1080.
    • (1999) EMBO J , vol.18 , pp. 1071-1080
    • Guo, W.1    Roth, D.2    Walch-Solimena, C.3    Novick, P.4
  • 5
    • 84862268931 scopus 로고    scopus 로고
    • Exorcising the exocyst complex
    • Heider, M. R. and Munson, M. (2012). Exorcising the exocyst complex. Traffic 13, 898-907.
    • (2012) Traffic , vol.13 , pp. 898-907
    • Heider, M.R.1    Munson, M.2
  • 6
    • 84890884015 scopus 로고    scopus 로고
    • Tethering the assembly of SNARE complexes
    • Hong, W. and Lev, S. (2014). Tethering the assembly of SNARE complexes. Trends Cell Biol. 24, 35-43.
    • (2014) Trends Cell Biol , vol.24 , pp. 35-43
    • Hong, W.1    Lev, S.2
  • 7
    • 0032103420 scopus 로고    scopus 로고
    • Subunit composition, protein interactions, and structures of the mammalian brain sec6/8 complex and septin filaments
    • Hsu, S.-C., Hazuka, C. D., Roth, R., Foletti, D. L., Heuser, J. and Scheller, R. H. (1998). Subunit composition, protein interactions, and structures of the mammalian brain sec6/8 complex and septin filaments. Neuron 20, 1111-1122.
    • (1998) Neuron , vol.20 , pp. 1111-1122
    • Hsu, S.-C.1    Hazuka, C.D.2    Roth, R.3    Foletti, D.L.4    Heuser, J.5    Scheller, R.H.6
  • 8
    • 67149101100 scopus 로고    scopus 로고
    • The BBSome
    • Jin, H. and Nachury, M. V. (2009). The BBSome. Curr. Biol. 19, R472-R473.
    • (2009) Curr. Biol , vol.19 , pp. R472-R473
    • Jin, H.1    Nachury, M.V.2
  • 9
    • 77953879123 scopus 로고    scopus 로고
    • The conserved Bardet-Biedl syndrome proteins assemble a coat that traffics membrane proteins to cilia
    • Jin, H., White, S. R., Shida, T., Schulz, S., Aguilar, M., Gygi, S. P., Bazan, J. F. and Nachury, M. V. (2010). The conserved Bardet-Biedl syndrome proteins assemble a coat that traffics membrane proteins to cilia. Cell 141, 1208-1219.
    • (2010) Cell , vol.141 , pp. 1208-1219
    • Jin, H.1    White, S.R.2    Shida, T.3    Schulz, S.4    Aguilar, M.5    Gygi, S.P.6    Bazan, J.F.7    Nachury, M.V.8
  • 10
    • 20244381625 scopus 로고    scopus 로고
    • The Bardet-Biedl protein BBS4 targets cargo to the pericentriolar region and is required for microtubule anchoring and cell cycle progression
    • Kim, J. C., Badano, J. L., Sibold, S., Esmail, M. A., Hill, J., Hoskins, B. E., Leitch, C. C., Venner, K., Ansley, S. J., Ross, A. J. et al. (2004). The Bardet-Biedl protein BBS4 targets cargo to the pericentriolar region and is required for microtubule anchoring and cell cycle progression. Nat. Genet. 36, 462-470.
    • (2004) Nat. Genet , vol.36 , pp. 462-470
    • Kim, J.C.1    Badano, J.L.2    Sibold, S.3    Esmail, M.A.4    Hill, J.5    Hoskins, B.E.6    Leitch, C.C.7    Venner, K.8    Ansley, S.J.9    Ross, A.J.10
  • 11
    • 78649644404 scopus 로고    scopus 로고
    • Structural and thermodynamic analysis of the GFP:GFP-nanobody complex
    • Kubala, M. H., Kovtun, O., Alexandrov, K. and Collins, B. M. (2010). Structural and thermodynamic analysis of the GFP:GFP-nanobody complex. Protein Sci. 19, 2389-2401.
    • (2010) Protein Sci , vol.19 , pp. 2389-2401
    • Kubala, M.H.1    Kovtun, O.2    Alexandrov, K.3    Collins, B.M.4
  • 12
    • 84874607850 scopus 로고    scopus 로고
    • Real-time single-molecule co-immunoprecipitation analyses reveal cancer-specific Ras signalling dynamics
    • Lee, H.-W., Kyong, T., Yoo, J., Kim, T., Chung, C., Ryu, J. Y., Lee, H., Park, K., Lee, S., Jones, W. D. et al. (2013). Real-time single-molecule co-immunoprecipitation analyses reveal cancer-specific Ras signalling dynamics. Nat. Commun. 4, 1505.
    • (2013) Nat. Commun , vol.4 , pp. 1505
    • Lee, H.-W.1    Kyong, T.2    Yoo, J.3    Kim, T.4    Chung, C.5    Ryu, J.Y.6    Lee, H.7    Park, K.8    Lee, S.9    Jones, W.D.10
  • 13
    • 84862647762 scopus 로고    scopus 로고
    • The exocyst complex in exocytosis and cell migration
    • Liu, J. and Guo, W. (2012). The exocyst complex in exocytosis and cell migration. Protoplasma 249, 587-597.
    • (2012) Protoplasma , vol.249 , pp. 587-597
    • Liu, J.1    Guo, W.2
  • 15
    • 84908554814 scopus 로고    scopus 로고
    • Ciliopathies: the trafficking connection
    • Madhivanan, K. and Aguilar, R. C. (2014). Ciliopathies: the trafficking connection. Traffic 15, 1031-1056.
    • (2014) Traffic , vol.15 , pp. 1031-1056
    • Madhivanan, K.1    Aguilar, R.C.2
  • 17
    • 0035859819 scopus 로고    scopus 로고
    • The Sec6/8 complex in mammalian cells: characterization of mammalian Sec3, subunit interactions
    • Matern, H. T., Yeaman, C., Nelson, W. J. and Scheller, R. H. (2001). The Sec6/8 complex in mammalian cells: characterization of mammalian Sec3, subunit interactions. Proc. Natl. Acad. Sci. USA 98, 9648-9653.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 9648-9653
    • Matern, H.T.1    Yeaman, C.2    Nelson, W.J.3    Scheller, R.H.4
  • 19
    • 33745841364 scopus 로고    scopus 로고
    • The exocyst defrocked, a framework of rods revealed
    • Munson, M. and Novick, P. (2006). The exocyst defrocked, a framework of rods revealed. Nat. Struct. Mol. Biol. 13, 577-581.
    • (2006) Nat. Struct. Mol. Biol , vol.13 , pp. 577-581
    • Munson, M.1    Novick, P.2
  • 21
    • 33947727395 scopus 로고    scopus 로고
    • Natively unfolded nucleoporins gate protein diffusion across the nuclear pore complex
    • Patel, S. S., Belmont, B. J., Sante, J. M. and Rexach, M. F. (2007). Natively unfolded nucleoporins gate protein diffusion across the nuclear pore complex. Cell 129, 83-96.
    • (2007) Cell , vol.129 , pp. 83-96
    • Patel, S.S.1    Belmont, B.J.2    Sante, J.M.3    Rexach, M.F.4
  • 22
    • 84861012522 scopus 로고    scopus 로고
    • Versatile toolbox for high throughput biochemical and functional studies with fluorescent fusion proteins
    • Pichler, G., Jack, A., Wolf, P. and Hake, S. B. (2012). Versatile toolbox for high throughput biochemical and functional studies with fluorescent fusion proteins. PLoS ONE 7, e36967.
    • (2012) PLoS ONE , vol.7
    • Pichler, G.1    Jack, A.2    Wolf, P.3    Hake, S.B.4
  • 25
    • 24044472050 scopus 로고    scopus 로고
    • Identification of a universal VHH framework to graft non-canonical antigen-binding loops of camel single-domain antibodies
    • Saerens, D., Pellis, M., Loris, R., Pardon, E., Dumoulin, M., Matagne, A., Wyns, L., Muyldermans, S. and Conrath, K. (2005). Identification of a universal VHH framework to graft non-canonical antigen-binding loops of camel single-domain antibodies. J. Mol. Biol. 352, 597-607.
    • (2005) J. Mol. Biol , vol.352 , pp. 597-607
    • Saerens, D.1    Pellis, M.2    Loris, R.3    Pardon, E.4    Dumoulin, M.5    Matagne, A.6    Wyns, L.7    Muyldermans, S.8    Conrath, K.9
  • 27
    • 44349090258 scopus 로고    scopus 로고
    • Single bead affinity detection (SINBAD) for the analysis of protein-protein interactions
    • Schulte, R., Talamas, J., Doucet, C. and Hetzer, M. W. (2008). Single bead affinity detection (SINBAD) for the analysis of protein-protein interactions. PLoS ONE 3, e2061.
    • (2008) PLoS ONE , vol.3
    • Schulte, R.1    Talamas, J.2    Doucet, C.3    Hetzer, M.W.4
  • 29
    • 30944467113 scopus 로고    scopus 로고
    • A guide to choosing fluorescent proteins
    • Shaner, N. C., Steinbach, P. A. and Tsien, R. Y. (2005). A guide to choosing fluorescent proteins. Nat. Methods 2, 905-909.
    • (2005) Nat. Methods , vol.2 , pp. 905-909
    • Shaner, N.C.1    Steinbach, P.A.2    Tsien, R.Y.3
  • 30
    • 77957368304 scopus 로고    scopus 로고
    • The ALG-2 binding site in Sec31A influences the retention kinetics of Sec31A at the endoplasmic reticulum exit sites as revealed by live-cell time-lapse imaging
    • Shibata, H., Inuzuka, T., Yoshida, H., Sugiura, H., Wada, I. and Maki, M. (2010). The ALG-2 binding site in Sec31A influences the retention kinetics of Sec31A at the endoplasmic reticulum exit sites as revealed by live-cell time-lapse imaging. Biosci. Biotech. Biochem. 74, 1819-1826.
    • (2010) Biosci. Biotech. Biochem , vol.74 , pp. 1819-1826
    • Shibata, H.1    Inuzuka, T.2    Yoshida, H.3    Sugiura, H.4    Wada, I.5    Maki, M.6
  • 31
    • 84893407429 scopus 로고    scopus 로고
    • The roles of evolutionarily conserved functional modules in cilia-related trafficking
    • Sung, C.-H. and Leroux, M. R. (2013). The roles of evolutionarily conserved functional modules in cilia-related trafficking. Nat. Cell Biol. 15, 1387-1397.
    • (2013) Nat. Cell Biol , vol.15 , pp. 1387-1397
    • Sung, C.-H.1    Leroux, M.R.2
  • 33
    • 0035145498 scopus 로고    scopus 로고
    • Purification and characterization of yeast exocyst complex
    • Terbush, D. R., Guo, W., Dunkelbarger, S. and Novick, P. (2001). Purification and characterization of yeast exocyst complex. Meth. Enzymol. 329, 100-110.
    • (2001) Meth. Enzymol , vol.329 , pp. 100-110
    • Terbush, D.R.1    Guo, W.2    Dunkelbarger, S.3    Novick, P.4
  • 34
    • 0035370951 scopus 로고    scopus 로고
    • The exocyst complex associates with microtubules to mediate vesicle targeting and neurite outgrowth
    • Vega, I. E. and Hsu, S.-C. (2001). The exocyst complex associates with microtubules to mediate vesicle targeting and neurite outgrowth. J. Neurosci. 21, 3839-3848.
    • (2001) J. Neurosci , vol.21 , pp. 3839-3848
    • Vega, I.E.1    Hsu, S.-C.2
  • 35
    • 84862004139 scopus 로고    scopus 로고
    • Intrinsic protein-protein interaction-mediated and chaperonin-assisted sequential assembly of stable Bardet-Biedl syndrome protein complex, the BBSome
    • Zhang, Q., Yu, D., Seo, S., Stone, E. M. and Sheffield, V. C. (2012). Intrinsic protein-protein interaction-mediated and chaperonin-assisted sequential assembly of stable Bardet-Biedl syndrome protein complex, the BBSome. J. Biol. Chem. 287, 20625-20635.
    • (2012) J. Biol. Chem , vol.287 , pp. 20625-20635
    • Zhang, Q.1    Yu, D.2    Seo, S.3    Stone, E.M.4    Sheffield, V.C.5
  • 36
    • 84875509584 scopus 로고    scopus 로고
    • Imaging beads-retained prey assay for rapid and quantitative protein-protein interaction
    • Zhou, Y., Hong, W. and Lu, L. (2013). Imaging beads-retained prey assay for rapid and quantitative protein-protein interaction. PLoS ONE 8, e59727.
    • (2013) PLoS ONE , vol.8
    • Zhou, Y.1    Hong, W.2    Lu, L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.