The family saprospiraceae

The Prokaryotes: Other Major Lineages of Bacteria and The Archaea

Volumn 9783642389542, Issue , 2014, Pages 863-889

  McIlroy, Simon Jon ^a   Nielsen, Per Halkjær ^a  

^a AALBORG UNIVERSITY   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84930254905     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-3-642-38954-2_138     Document Type: Chapter

References (107)

1. Aasen AJ, Jensen SL (1966) The carotenoids of Flexibacteria II. A new xanthophyll from Saprospira grandis. Acta Chem Scand 20:811-819
2. Aizawa S-I (2005) Bacterial gliding motility: visualizing invisible machinery. ASM News 71:71-76
3. Ashton PJ, Robarts RD (1987) Apparent predation of Microcystis aeruginosa Kütz. Emend elenkin by a Saprospira-like bacterium in a hypertrophic lake (Hartbeespoort Dam, South Africa). J Limnol Soc South Afr 13:44-47
4. Burke C, Thomas T, Lewis M, Steinberg P, Kjelleberg S (2011) Composition, uniqueness and variability of the epiphytic bacterial community of the green alga Ulva australis. ISME J 5:590-600
5. Crombach WHJ, van Veen WL, van der Vlies AW, Bots WCPM (1974) DNA base composition of some sheathed bacteria. Antonie Van Leeuwenhoek 40:217-220
6. Daims H, Stoecker K,WagnerM(2005) Fluorescence in situ hybridization for the detection of prokaryotes. In: Osborn AM, Smith CJ (eds) Molecular microbial ecology. Taylor & Francis, New York, pp 213-239
7. Daligault H, Lapidus A, Zeytun A, Nolan M, Lucas S, Del Rio TG, Tice H, Cheng JF, Tapia R, Han C, Goodwin L, Pitluck S, Liolios K, Pagani I, Ivanova N, Huntemann M, Mavromatis K, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Brambilla EM, Rohde M, Verbarg S, Goker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP,Woyke T (2011) Complete genome sequence of Haliscomenobacter hydrossis type strain (O). Stand Genomic Sci 4:352-360
8. Dawson RMC, Elliott DC, Elliott WH, Jones KM (1972) Data for biochemical research. Clarendon, Oxford Delk AS, Dekker CA (1972) Characterization of rhapidosomes of Saprospira grandis. J Mol Biol 64:287-295
9. Delong EF, Franks DG, Alldredge AL (1993) Phylogenetic diversity of aggregateattached vs. free-living marine bacterial assemblages. Limnol Oceanogr 38:924-934
10. Furusawa G, Yoshikawa T, Yasuda A, Sakata T (2003) Algicidal activity and gliding motility of Saprospira sp. SS98-5. Can J Microbiol 49:92-100
11. Furusawa G, Yoshikawa T, Takano Y, Mise K, Furusawa I, Okuno T, Sakata T (2005) Characterization of cytoplasmic fibril structures found in gliding cells of Saprospira sp. Can J Microbiol 51:875-880
12. Garrity GM, Holt J (2001) Taxonomic outline of the Archaea and Bacteria. In: Boone DR, Castenholtz RW, Garrity GM(eds) Bergey's manual of systematic bacteriology, 2nd edn. Springer, New York, pp 155-166
13. Gaval G, Pernelle JJ (2003) Impact of the repetition of oxygen deficiencies on the filamentous bacteria proliferation in activated sludge. Water Res 37:1991-2000
14. Gherna R, Woese CR (1992) A partial phylogenetic analysis of the ''Flavobacter-Bacteroides'' phylum: basis for taxonomic restructuring. Syst Appl Microbiol 15:513-521
15. Gross J (1911) Ü ber freilebende Spironemaceen. Mitt Zool Stat Neapel 20:188-203
16. HahnMW, Schauer M (2007) 'Candidatus Aquirestis calciphila' and 'Candidatus Haliscomenobacter calcifugiens', filamentous, planktonic bacteria inhabiting natural lakes. Int J Syst Evol Microbiol 57:936-940
17. Hamana K, Nakagawa Y (2001) Polyamine distribution profiles in eighteen genera phylogenetically located within the Flavobacterium-Flexibacter-Cytophaga complex. Microbios 106:7-17
18. Hamana K, Itoh T, Benno Y, Hayashi H (2008) Polyamine distribution profiles of new members of the phylum Bacteroidetes. J Gen ApplMicrobiol 54:229-236
19. Holt J (1989) Genus Herpetosiphon Holt and Lewin 1965, 2408. In: Staley JT, Bryant MP, Pfenning N, Holt J (eds) Bergey's manual of systematic bacteriology, vol 3. Williams & Wilkins, Baltimore, pp 2136-2138
20. Hosoya R, Hamana K (2003) Absence of cellular triamines in four novel Flavobacteria located in Flavobacterium-Flexibacter-Cytophaga complex. Ann Gunma Health Sci 24:13-16
21. Hosoya S, Arunpairojana V, Suwannachart C, Kanjana-Opas A, Yokota A (2006) Aureispira marina gen. nov., sp. nov., a gliding, arachidonic acid-containing bacterium isolated from the southern coastline of Thailand. Int J Syst Evol Microbiol 56:2931-2935
22. Hosoya S, Arunpairojana V, Suwannachart C, Kanjana-Opas A, Yokota A (2007) Aureispira maritima sp. nov., isolated from marine barnacle debris. Int J Syst Evol Microbiol 57:1948-1951
23. Iwamoto K, Yoshikawa T, Sakata T (2000) DNA-DNA hybridization and RFLP analysis of algicidal filamentous bacteria isolated from marine environments. Suisanzoshoku 48:123-130
24. Jenkins D, Richard MG, Daigger GT (2004) Manual on the causes and control of activated sludge bulking, foaming and other solids separation problems, 3rd edn. CRC Press LLC, London Kaeberlein T, Lewis K, Epstein SS (2002) Isolating ''uncultivable'' microorganisms in pure culture in a simulated natural environment. Science 296:1127-1129
25. Kämpfer P (1995) Physiological and chemotaxonomic characterization of filamentous bacteria belonging to the genus Haliscomenobacter. Syst Appl Microbiol 18:363-367
26. Kämpfer P (2011) Genus III. Haliscomenobacter van Veen, van der Kooy, Geuze and van der Vlies 1973, 213. In: Krieg NR, Staley JT, Brown DR, Hedlund BP, Paster BJ, Ward NL, Ludwig W, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 4, 2nd edn. Springer, New York, pp 363-366
27. Kämpfer P, Weltin D, Hoffmeister D, Dott W (1995) Growth requirements of filamentous bacteria isolated from bulking and scumming sludge.Water Res 29:1585-1588
28. Kang Y-H, Jung SW, Jo SH, Han MS (2011) Field assessment of the potential of algicidal bacteria against diatom blooms. Biocontrol Sci Technol 21:969-984
29. Khan ST, Fukunaga Y, Nakagawa Y, Harayama S (2007) Emended descriptions of the genus Lewinella and of Lewinella cohaerens, Lewinella nigricans and Lewinella persica, and description of Lewinella lutea sp. nov. And Lewinella marina sp. nov. Int J Syst Evol Microbiol 57:2946-2951
30. Kirchman DL (2002) The ecology of Cytophaga-Flavobacteria in aquatic environments. FEMS Microbiol Ecol 39:91-100
31. Kojima H, Koizumi Y, Fukui M (2006) Community structure of bacteria associated with sheaths of freshwater and brackish Thioploca species. Microb Ecol 52:765-773
32. Kong Y, Xia Y, Nielsen J, Nielsen P (2007) Structure and function of the microbial community in a full-scale enhanced biological phosphorus removal plant. Microbiology 153:4061-4073
33. Kotay SM, Datta T, Choi J, Goel R (2011) Biocontrol of biomass bulking caused by Haliscomenobacter hydrossis using a newly isolated lytic bacteriophage. Water Res 45:694-704
34. Kragelund C, Levantesi C, Borger A, Thelen K, Eikelboom D, Tandoi V, Kong Y, Krooneman J, Larsen P, Thomsen T, Nielsen P (2008) Identity, abundance and ecophysiology of filamentous bacteria belonging to the Bacteroidetes present in activated sludge plants. Microbiology 154:886-894
35. Krieg NR, Staley JT, Brown DR, Hedlund BP, Paster BJ, Ward NL, Ludwig W, Whitman WB (2011) Family III. Saprospiraceae fam. nov. In: Krieg NR, Staley JT, Brown DR, Hedlund BP, Paster BJ,Ward NL, LudwigW,Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 4, 2nd edn. Springer, New York, pp 358-370
36. Krul JM (1977) Experiments with Haliscomenobacter hydrossis in continuous culture without and with Zoogloea ramigera. Water Res 11:197-204
37. Lachnit T, Meske D, Wahl M, Harder T, Schmitz R (2011) Epibacterial community patterns on marine macroalgae are host-specific but temporally variable. Environ Microbiol 13:655-665
38. Lee SD (2006) Kineococcus marinus sp. nov., isolated from marine sediment of the coast of Jeju, Korea. Int J Syst Evol Microbiol 56:1279-1283
39. Lee SD (2007) Lewinella agarilytica sp. nov., a novel marine bacterium of the phylum Bacteroidetes, isolated from beach sediment. Int J Syst Evol Microbiol 57:2814-2818
40. Lewin RA (1960) A Spirochaeta phage. Nature 186:901-902
41. Lewin RA (1962) Saprospira grandis Gross; and suggestions for reclassifying helical, apochlorotic, gliding organisms. Can J Microbiol 8:555-563
42. Lewin RA (1963) Rod-shaped particles in Saprospira. Nature 198:103-104
43. Lewin RA (1965a) Isolation and some physical properties of Saprospira thermalis. Can J Microbiol 11:77-86
44. Lewin RA (1965b) Freshwater species of Saprospira. Can J Microbiol 11:135-139
45. Lewin RA (1969) A classification of the Flexibacteria. J Gen Microbiol 58:189-206
46. Lewin RA (1970) New Herpetosiphon species (Flexibacteralis). Can J Microbiol 16:517-520
47. Lewin RA (1972) Growth and nutrition of Saprospira grandis Gross (Flexibacterales). Can J Microbiol 18:361-365
48. Lewin RA (1997) Saprospira grandis: A flexibacterium that can catch bacterial prey by ''ixotrophy''. Microb Ecol 34:232-236
49. Lewin RA (2011) Genus I. Saprospira Gross 1911, 202. In: Krieg NR, Staley JT, Brown DR, Hedlund BP, Paster BJ,Ward NL, LudwigW, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 4, 2nd edn. Springer, New York, pp 359-361
50. Lewin RA, Lounsbery DM (1969) Isolation, cultivation and characterization of Flexibacteria. J Gen Microbiol 58:145-170
51. Lewin RA, Crothers DM, Correll DL, Reimann BE (1964) A phage infecting Saprospira grandis. Can J Microbiol 10:75-85
52. ManzW, Amann R, LudwigW, Vancanneyt M, Schleifer K-H (1996) Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum Cytophaga-Flavobacter-Bacteroides in the natural environment. Microbiology 142:1097-1106
53. Markowitz VM, Chen IA, Palaniappan K, Chu K, Szeto E, Grechkin Y, Ratner A, Jacob B, Huang J, Williams P, Huntemann M, Anderson I, Mavromatis K, Ivanova NN, Kyrpides NC (2012) IMG: the intergrated microbial genomes database and comparative analysis system. Nucleic Acids Res 40:D115-D122
54. Mavromatis K, Chertkov O, Lapidus A, Nolan M, Lucas S, Tice H, Del Rio TG, Cheng JF, Han C, Tapia R, Bruce D, Goodwin LA, Pitluck S, Huntemann M, Liolios K, Pagani I, Ivanova N, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Brambilla EM, Rohde M, Spring S, Goker M, Detter JC, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Woyke T (2012) Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 ( HR1). Stand Genomic Sci 6:210-219
55. Mayali X, Azam F (2004) Algicidal bacteria in the sea and their impact on algal blooms. J Eukaryot Microbiol 51:139-144
56. Mielczarek AT, Kragelund C, Eriksen PS, Nielsen PH (2012) Population dynamics of filamentous bacteria in Danish wastewater treatment plants with nutrient removal. Water Res 46:3781-3795
57. Mincer TJ, Spyere A, Jensen PR, Fenical W (2004) Phylogenetic analyses and diterpenoid production by marine bacteria of the genus Saprospira. Curr Microbiol 49:300-307
58. Morgenroth E, Kommedal R, Harremoës P (2002) Processes and modelling of hydrolysis of particulate organic matter in aerobic wastewater treatment-a review. Water Sci Technol 45(6):25-40
59. Mulder EG, Deinema MH (2006) The genus Haliscomenobacter. In: Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E (eds) The prokaryotes. Springer, Singapore, pp 602-604
60. Newton RJ, Jones SE, Eiler A, McMahon KD, Bertilsson S (2011) A guide to the natural history of freshwater lake bacteria. Microbiol Mol Biol Rev 75:14-49
61. Nielsen PH, Kragelund C, Seviour RJ, Nielsen JL (2009) Identity and ecophysiology of filamentous bacteria in activated sludge. FEMS Microbiol Rev 33:969-998
62. Nielsen PH, Mielczarek AT, Kragelund C, Nielsen JL, Saunders AM, Kong Y, Hansen AA, Vollertsen J (2010) A conceptual ecosystem model of microbial communities in enhanced biological phosphorus removal plants. Water Res 44:5070-5088
63. O'Sullivan LA, Weightman AJ, Fry JC (2002) New degenerate Cytophaga-Flexibacter-Bacteroides-specific 16S ribosomal DNA-targeted oligonucleotide probes reveal high bacterial diversity in River Taff epilithon. Appl Environ Microbiol 68:201-210
64. Oh HM, Lee K, Cho JC (2009) Lewinella antarctica sp. nov., a marine bacterium isolated from Antarctic seawater. Int J Syst Evol Microbiol 59:65-68
65. Pagani I, Liolios K, Jansson J, Chen IM, Smirnova T, Nosrat B, Markowitz VM, Kyrpides NC (2012) The Genomes OnLine Database (GOLD) v. 4: status of genomic and metagenomic projects and their associated metadata. Nucleic Acids Res 40:D571-D579
66. Paster BJ, Ludwig W, Weisburg WG, Stackebrandt E, Hespell RB, Hahn CM, Reichenbach H, Stetter KO, Woese CR (1985) A phylogenetic grouping of the Bacteroides,Cytophagas, and certain Flavobacteria. SystApplMicrobiol 6:34-42
67. Pernelle JJ, Gaval G, Cotteux E, Duchene P (2001) Influence of transient substrate overloads on the proliferation of filamentous bacterial populations in an activated sludge pilot plant. Water Res 35:129-134
68. Pernthaler J, Zollner E, Warnecke F, Jurgens K (2004) Bloom of filamentous bacteria in a mesotrophic lake: identity and potential controlling mechanism. Appl Environ Microbiol 70:6272-6281
69. Pruesse E, Quast C, Knittel K, Fuchs B, Ludwig W, Peplies J, Glöckner F (2007) SILVA: A comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res 35:188-196
70. Rashidan KK, Bird DF (2001) Role of predatory bacteria in the termination of a cyanobacterial bloom. Microb Ecol 41:97-105
71. Reasoner DJ, Geldreich EE (1985) A new medium for the enumeration and subculture of bacteria from potable water. Appl Environ Microbiol 49:1-7
72. Reichenbach H (1980) Saprospira grandis (Leucotrichales): Wachstum und Bewegung. Publik Wiss Film Sekt Biol 13:1-21
73. Reichenbach H (1989) Genus Saprospira Gross 1911, 202. In: Staley JT, Bryant MP, Pfenning N, Holt J (eds) Bergey's manual of systematic bacteriology, vol 3. Williams & Wilkins, Baltimore, pp 2077-2082
74. Reichenbach H (2006) The genus Saprospira. In: Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E (eds) Prokaryotes. Springer, Singapore, pp 591-601
75. Reichenbach H, DworkinM(1981) Introduction to the gliding bacteria. In: Starr MP, Stolp H, Trüper HG, Balows A, Schlegel HG (eds) The prokaryotes: A handbook on habitats, isolation, and identification of bacteria. Springer, New York, pp 315-327
76. Sakata T, Yasumoto H (1991) Colony formation by algicidal Saprospira sp. on marine agar plates. Nippon Suisan Gakkaishi 57:2139-2143
77. Sakata T, Fujita Y, Yasumoto H (1991) Plaque formation by algicidal Saprospira sp. on a lawn of Chaetoceros ceratosporum. Nippon Suisan Gakkaishi 57:1147-1152
78. Sanfilippo A, Lewin RA (1970) Preservation of viable flexibacteria at low temperatures. Can J Microbiol 16:441-444
79. Sangkhobol V, Skerman VBD (1981) Saprospira species-natural predators. Curr Microbiol 5:169-174
80. Saw JH, Yuryev A, Kanbe M, Hou S, Young AG, Aizawa S, Alam M (2012) Complete genome sequencing and analysis of Saprospira grandis str. Lewin, a predatory marine bacterium. Stand Genomic Sci 6:84-93
81. Schauer M, HahnMW(2005) Diversity and phylogenetic affiliations of morphologically conspicuous large filamentous bacteria occurring in the pelagic zones of a broad spectrum of freshwater habitats. Appl Environ Microbiol 71:1931-1940
82. Schauer M, Kamenik C, Hahn MW (2005) Ecological differentiation within a cosmopolitan group of planktonic freshwater bacteria (SOL cluster, Saprospiraceae, Bacteroidetes). Appl Environ Microbiol 71:5900-5907
83. Schauer M, Jiang J, HahnMW(2006) Recurrent seasonal variations in abundance and composition of filamentous SOL cluster bacteria (Saprospiraceae, Bacteroidetes) in oligomesotrophic Lake Mondsee (Austria). Appl Environ Microbiol 72:4704-4712
84. Seviour EM, McIlroy SJ, Seviour RJ (2010) Descriptions of activated sludge organisms. In: Seviour RJ, Nielsen PH (eds) Microbial ecology of activated sludge. IWA, London, pp 453-487
85. Shi M, Zou L, Liu X, Gao Y, Zhang Z,WuW,Wen D, Chen Z, An C (2006) A novel bacterium Saprospira sp. strain PdY3 forms bundles and lyses cyanobacteria. Front Biosci 11:1916-1923
86. Sladká A, Ottová V (1973) Filamentous organisms in activated sludge. Hydrobiologia 43:285-299
87. Sly LI, Taghavi M, Fegan M (1998) Phylogenetic heterogeneity within the genus Herpetosiphon: transfer of the marine species Herpetosiphon cohaerens, Herpetosiphon nigricans and Herpetosiphon persicus to the genus Lewinella gen. nov. in the Flexibacter-Bacteroides-Cytophaga phylum. Int J Syst Bacteriol 48(Pt 3):731-737
88. Snaidr J, Fuchs B, Wallner G, Wagner M, Schleifer K-H, Amann R (1999) Phylogeny and in situ identification of a morphologically conspicuous bacterium, Candidatus Magnospira bakii, present at very low frequency in activated sludge. Environ Microbiol 1:125-135
89. Spyere A, Rowley DC, Jensen PR, Fenical W (2003) New neoverrucosane diterpenoids produced by the marine gliding bacterium Saprospira grandis. J Nat Prod 66:818-822
90. van der Waarde J, Krooneman J, Geurkink B, van der Werf A, Eikelboom D, Beimfohr C, Snaidr J, Levantesi C, Tandoi V (2002)Molecular monitoring of bulking sludge in industrial wastewater treatment plants. Water Sci Technol 46(1-2):551-558
91. van Veen WL (1973) Bacteriology of activated sludge, in particular the filamentous bacteria. Antonie Van Leeuwenhoek 39:189-205
92. van Veen WL, van der Kooij D, Geuze ECWA, van der Vlies AW (1973)-Investigations on the sheathed bacterium Haliscomenobacter hydrossis gen. n., sp.n., isolated from activated sludge. Antonie Van Leeuwenhoek 39:207-216
93. Wagner M, Amann R, Kämpfer P, Assmus B, Hartmann A, Hutzler P, Springer N, Schleifer K-H (1994) Identification and in situ detection of gram-negative filamentous bacteria in activated sludge. Syst Appl Microbiol 17:405-417
94. Weller R, Glöckner F, Amann R (2000) 16S rRNA-targeted oligonucleotide probes for the in situ detection of members of the phylum Cytophaga-Flavobacterium-Bacteroides. Syst Appl Microbiol 23:107-114
95. Wu D, Hugenholtz P, Mavromatis K, Pukall R, Dalin E, Ivanova NN, Kunin V, Goodwin L, Wu M, Tindall BJ, Hooper SD, Pati A, Lykidis A, Spring S, Anderson IJ, D'haeseleer P, Zemla A, Singer M, Lapidus A, Nolan M, Copeland A, Han C, Chen F, Cheng JF, Lucas S, Kerfeld C, Lang E, Gronow S, Chain P, Bruce D, Rubin EM, Kyrpides NC, Klenk HP, Eisen JA (2009) A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea. Nature 462:1056-1060
96. Xia Y, Kong Y, Nielsen PH (2007) In situ detection of protein-hydrolysing microorganisms in activated sludge. FEMS Microbiol Ecol 60:156-165
97. Xia Y, Kong Y, Thomsen TR, Nielsen PH (2008) Identification and ecophysiological characterization of epiphytic protein hydrolyzing Saprospiraceae (''Candidatus Epiflobacter'' spp.) in activated sludge. Appl Environ Microbiol 74:2229-2238
98. Yarza P, Ludwig W, Euzeby J, Amann R, Schleifer K-H, Glockner FO, Rossello-Mora R (2010) Update of the All-Species Living Tree Project based on 16S and 23S rRNA sequence analyses. Syst Appl Microbiol 33:291-299
99. Yokozeki K, Hara S (2005) A novel and efficient enzymatic method for the production of peptides from unprotected starting materials. J Biotechnol 115:211-220
100. Yokozeki K, Abe I, Hara S (2006)Method for producing dipeptides. United States Patent Application: US 2006/0177893
101. Yokozeki K, Ohno A, Hara S, Abe I (2012) Method for producing alpha-Laspartyl-L-phenylalanine-beta-ester and method for producing alpha-Laspartyl-L-phenylalanine-alpha-methyl ester. European Patent Specification: 09011830.8
102. Yoon J, Yasumoto-Hirose M, Matsuo Y, NozawaM, Matsuda S, Kasai H, Yokota A (2007) Pelagicoccus mobilis gen. nov., sp. nov., Pelagicoccus albus sp. nov. And Pelagicoccus litoralis sp. nov., three novel members of subdivision 4 within the phylum 'Verrucomicrobia', isolated from seawater by in situ cultivation. Int J Syst Evol Microbiol 57:1377-1385
103. Yoon J, Katsuta A, Kasai H (2012a) Rubidimonas crustatorum gen. nov., sp. nov., a novel member of the family Saprospiraceae isolated from a marine crustacean. Antonie Van Leeuwenhoek 101:461-467
104. Yoon J, Matsuo Y, Kasai H, Yokota A (2012b) Portibacter lacus gen. nov., sp.nov., a new member of the family Saprospiraceae isolated from a saline lake. J Gen Appl Microbiol 58:191-197
105. Yoshikawa T, Nakahara M, Tabata A, Kokumai S, Furusawa G, Sakata T (2008) Characterization and expression of Saprospira cytoplasmic fibril protein (SCFP) gene from algicidal Saprospira spp. strains. Fish Sci 74:1109-1117
106. Ziegler M, Lange M, DottW(1990) Isolation and morphological and cytological characterization of filamentous bacteria from bulking sludge. Water Res 24:1437-1451
107. Zwart G, Crump BC, Kamst-van Agterveld MP, Hagen F, Han S-K (2002) Typical freshwater bacteria: an analysis of available 16S rRNA gene sequences from plankton of lakes and rivers. Aquat Microb Ecol 28:141-155