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Volumn 33, Issue 6, 2015, Pages 1771-1781

Single-cell XIST expression in human preimplantation embryos and newly reprogrammed female induced pluripotent stem cells

Author keywords

Human; Human induced pluripotent stem cells; Preimplantation embryo development; X chromosome inactivation; XIST RNA

Indexed keywords

LONG UNTRANSLATED RNA; MESSENGER RNA;

EID: 84929715929     PISSN: 10665099     EISSN: 15494918     Source Type: Journal    
DOI: 10.1002/stem.1992     Document Type: Article
Times cited : (28)

References (43)
  • 1
    • 7144223296 scopus 로고
    • Gene action in the X-chromosome of the mouse (Mus musculus L)
    • Lyon MF,. Gene action in the X-chromosome of the mouse (Mus musculus L.). Nature 1961; 190: 372-373.
    • (1961) Nature , vol.190 , pp. 372-373
    • Lyon, M.F.1
  • 2
    • 0347357614 scopus 로고    scopus 로고
    • Inheritance of a pre- inactivated paternal X chromosome in early mouse embryos
    • Huynh KD, Lee JT,. Inheritance of a pre- inactivated paternal X chromosome in early mouse embryos. Nature 2003; 426: 857-862.
    • (2003) Nature , vol.426 , pp. 857-862
    • Huynh, K.D.1    Lee, J.T.2
  • 3
    • 0942268867 scopus 로고    scopus 로고
    • Reactivation of the paternal X chromosome in early mouse embryos
    • Mak W, Nesterova TB, de Napoles M, et al., Reactivation of the paternal X chromosome in early mouse embryos. Science 2004; 303: 666-669.
    • (2004) Science , vol.303 , pp. 666-669
    • Mak, W.1    Nesterova, T.B.2    De Napoles, M.3
  • 4
    • 0942268864 scopus 로고    scopus 로고
    • Epigenetic dynamics of imprinted X inactivation during early mouse development
    • Okamoto I, Otte AP, Allis CD, et al., Epigenetic dynamics of imprinted X inactivation during early mouse development. Science 2004; 303: 644-649.
    • (2004) Science , vol.303 , pp. 644-649
    • Okamoto, I.1    Otte, A.P.2    Allis, C.D.3
  • 5
    • 0035875092 scopus 로고    scopus 로고
    • Control of Xist expression for imprinted and random X chromosome inactivation in mice
    • Matsui J, Goto Y, Takagi N,. Control of Xist expression for imprinted and random X chromosome inactivation in mice. Hum Mol Genet 2001; 10: 1393-1401.
    • (2001) Hum Mol Genet , vol.10 , pp. 1393-1401
    • Matsui, J.1    Goto, Y.2    Takagi, N.3
  • 6
    • 0025961771 scopus 로고
    • A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome
    • Brown CJ, Ballabio A, Rupert JL, et al., A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome. Nature 1991; 349: 38-44.
    • (1991) Nature , vol.349 , pp. 38-44
    • Brown, C.J.1    Ballabio, A.2    Rupert, J.L.3
  • 7
    • 0030034051 scopus 로고    scopus 로고
    • XIST RNA paints the inactive X chromosome at interphase: Evidence for a novel RNA involved in nuclear/chromosome structure
    • Clemson CM, McNeil JA, Willard HF, et al., XIST RNA paints the inactive X chromosome at interphase: Evidence for a novel RNA involved in nuclear/chromosome structure. J Cell Biol 1996; 132: 259-275.
    • (1996) J Cell Biol , vol.132 , pp. 259-275
    • Clemson, C.M.1    McNeil, J.A.2    Willard, H.F.3
  • 8
    • 0031044166 scopus 로고    scopus 로고
    • Xist-deficient mice are defective in dosage compensation but not spermatogenesis
    • Marahrens Y, Panning B, Dausman J, et al., Xist-deficient mice are defective in dosage compensation but not spermatogenesis. Genes Dev 1997; 11: 156-166.
    • (1997) Genes Dev , vol.11 , pp. 156-166
    • Marahrens, Y.1    Panning, B.2    Dausman, J.3
  • 9
    • 0030026001 scopus 로고    scopus 로고
    • Requirement for Xist in X chromosome inactivation
    • Penny GD, Kay GF, Sheardown SA, et al., Requirement for Xist in X chromosome inactivation. Nature 1996; 379: 131-137.
    • (1996) Nature , vol.379 , pp. 131-137
    • Penny, G.D.1    Kay, G.F.2    Sheardown, S.A.3
  • 10
    • 0030825725 scopus 로고    scopus 로고
    • XIST expression and X-chromosome inactivation in human preimplantation embryos
    • Brown CJ, Robinson WP,. XIST expression and X-chromosome inactivation in human preimplantation embryos. Am J Hum Genet 1997; 61: 5-8.
    • (1997) Am J Hum Genet , vol.61 , pp. 5-8
    • Brown, C.J.1    Robinson, W.P.2
  • 11
    • 0030764111 scopus 로고    scopus 로고
    • XIST expression in human oocytes and preimplantation embryos
    • Daniels R, Zuccotti M, Kinis T, et al., XIST expression in human oocytes and preimplantation embryos. Am J Hum Genet 1997; 61: 33-39.
    • (1997) Am J Hum Genet , vol.61 , pp. 33-39
    • Daniels, R.1    Zuccotti, M.2    Kinis, T.3
  • 12
    • 66449134804 scopus 로고    scopus 로고
    • X chromosome inactivation is initiated in human preimplantation embryos
    • van den Berg IM, Laven JS, Stevens M, et al., X chromosome inactivation is initiated in human preimplantation embryos. Am J Hum Genet 2009; 84: 771-779.
    • (2009) Am J Hum Genet , vol.84 , pp. 771-779
    • Van Den Berg, I.M.1    Laven, J.S.2    Stevens, M.3
  • 13
    • 79955482843 scopus 로고    scopus 로고
    • Eutherian mammals use diverse strategies to initiate X-chromosome inactivation during development
    • Okamoto I, Patrat C, Thepot D, et al., Eutherian mammals use diverse strategies to initiate X-chromosome inactivation during development. Nature 2011; 472: 370-374.
    • (2011) Nature , vol.472 , pp. 370-374
    • Okamoto, I.1    Patrat, C.2    Thepot, D.3
  • 14
    • 42449134974 scopus 로고    scopus 로고
    • X-chromosome inactivation and epigenetic fluidity in human embryonic stem cells
    • Silva SS, Rowntree RK, Mekhoubad S, et al., X-chromosome inactivation and epigenetic fluidity in human embryonic stem cells. Proc Natl Acad Sci USA 2008; 105: 4820-4825.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 4820-4825
    • Silva, S.S.1    Rowntree, R.K.2    Mekhoubad, S.3
  • 15
    • 79951511832 scopus 로고    scopus 로고
    • Meta-analysis of the heterogeneity of X chromosome inactivation in human pluripotent stem cells
    • Bruck T, Benvenisty N,. Meta-analysis of the heterogeneity of X chromosome inactivation in human pluripotent stem cells. Stem Cell Res 2011; 6: 187-193.
    • (2011) Stem Cell Res , vol.6 , pp. 187-193
    • Bruck, T.1    Benvenisty, N.2
  • 16
    • 70349934958 scopus 로고    scopus 로고
    • Suppression of Erk signaling promotes ground state pluripotency in the mouse embryo
    • Nichols J, Silva J, Roode M, et al., Suppression of Erk signaling promotes ground state pluripotency in the mouse embryo. Development 2009; 136: 3215-3222.
    • (2009) Development , vol.136 , pp. 3215-3222
    • Nichols, J.1    Silva, J.2    Roode, M.3
  • 17
    • 34249909232 scopus 로고    scopus 로고
    • Directly reprogrammed fibroblasts show global epigenetic remodeling and widespread tissue contribution
    • Maherali N, Sridharan R, Xie W, et al., Directly reprogrammed fibroblasts show global epigenetic remodeling and widespread tissue contribution. Cell Stem Cell 2007; 1: 55-70.
    • (2007) Cell Stem Cell , vol.1 , pp. 55-70
    • Maherali, N.1    Sridharan, R.2    Xie, W.3
  • 18
    • 77956222202 scopus 로고    scopus 로고
    • Female human iPSCs retain an inactive X chromosome
    • Tchieu J, Kuoy E, Chin MH, et al., Female human iPSCs retain an inactive X chromosome. Cell Stem Cell 2010; 7: 329-342.
    • (2010) Cell Stem Cell , vol.7 , pp. 329-342
    • Tchieu, J.1    Kuoy, E.2    Chin, M.H.3
  • 19
  • 20
    • 80053143413 scopus 로고    scopus 로고
    • Isogenic pairs of wild type and mutant induced pluripotent stem cell (iPSC) lines from Rett syndrome patients as in vitro disease model
    • Ananiev G, Williams EC, Li H, et al., Isogenic pairs of wild type and mutant induced pluripotent stem cell (iPSC) lines from Rett syndrome patients as in vitro disease model. PLoS One 2011; 6: e25255.
    • (2011) PLoS One , vol.6 , pp. e25255
    • Ananiev, G.1    Williams, E.C.2    Li, H.3
  • 21
    • 79955602167 scopus 로고    scopus 로고
    • Isolation of MECP2-null Rett Syndrome patient hiPS cells and isogenic controls through X-chromosome inactivation
    • Cheung AY, Horvath LM, Grafodatskaya D, et al., Isolation of MECP2-null Rett Syndrome patient hiPS cells and isogenic controls through X-chromosome inactivation. Hum Mol Genet 2011; 20: 2103-2115.
    • (2011) Hum Mol Genet , vol.20 , pp. 2103-2115
    • Cheung, A.Y.1    Horvath, L.M.2    Grafodatskaya, D.3
  • 22
    • 84860640679 scopus 로고    scopus 로고
    • Erosion of dosage compensation impacts human iPSC disease modeling
    • Mekhoubad S, Bock C, de Boer AS, et al., Erosion of dosage compensation impacts human iPSC disease modeling. Cell Stem Cell 2012; 10: 595-609.
    • (2012) Cell Stem Cell , vol.10 , pp. 595-609
    • Mekhoubad, S.1    Bock, C.2    De Boer, A.S.3
  • 23
    • 84902179333 scopus 로고    scopus 로고
    • X Chromosome of female cells shows dynamic changes in status during human somatic cell reprogramming
    • Kim KY, Hysolli E, Tanaka Y, et al., X Chromosome of female cells shows dynamic changes in status during human somatic cell reprogramming. Stem Cell Rep 2014; 2: 896-909.
    • (2014) Stem Cell Rep , vol.2 , pp. 896-909
    • Kim, K.Y.1    Hysolli, E.2    Tanaka, Y.3
  • 24
    • 84863615190 scopus 로고    scopus 로고
    • Derivation conditions impact X-inactivation status in female human induced pluripotent stem cells
    • Tomoda K, Takahashi K, Leung K, et al., Derivation conditions impact X-inactivation status in female human induced pluripotent stem cells. Cell Stem Cell 2012; 11: 91-99.
    • (2012) Cell Stem Cell , vol.11 , pp. 91-99
    • Tomoda, K.1    Takahashi, K.2    Leung, K.3
  • 25
    • 78149488365 scopus 로고    scopus 로고
    • A model for neural development and treatment of Rett syndrome using human induced pluripotent stem cells
    • Marchetto MC, Carromeu C, Acab A, et al., A model for neural development and treatment of Rett syndrome using human induced pluripotent stem cells. Cell 2010; 143: 527-539.
    • (2010) Cell , vol.143 , pp. 527-539
    • Marchetto, M.C.1    Carromeu, C.2    Acab, A.3
  • 26
    • 77953500860 scopus 로고    scopus 로고
    • Induction of pluripotency in human endothelial cells resets epigenetic profile on genome scale
    • Lagarkova MA, Shutova MV, Bogomazova AN, et al., Induction of pluripotency in human endothelial cells resets epigenetic profile on genome scale. Cell Cycle 2010; 9: 937-946.
    • (2010) Cell Cycle , vol.9 , pp. 937-946
    • Lagarkova, M.A.1    Shutova, M.V.2    Bogomazova, A.N.3
  • 27
    • 84897476274 scopus 로고    scopus 로고
    • Reactivation of capital HA, Cyrillic chromosome upon reprogramming leads to changes in the replication pattern and 5hmC accumulation
    • Bogomazova AN, Lagarkova MA, Panova AV, et al., Reactivation of capital HA, Cyrillic chromosome upon reprogramming leads to changes in the replication pattern and 5hmC accumulation. Chromosoma 2014; 123: 117-128.
    • (2014) Chromosoma , vol.123 , pp. 117-128
    • Bogomazova, A.N.1    Lagarkova, M.A.2    Panova, A.V.3
  • 28
    • 27744512983 scopus 로고    scopus 로고
    • Cellular differentiation hierarchies in normal and culture-adapted human embryonic stem cells
    • Enver T, Soneji S, Joshi C, et al., Cellular differentiation hierarchies in normal and culture-adapted human embryonic stem cells. Hum Mol Genet 2005; 14: 3129-3140.
    • (2005) Hum Mol Genet , vol.14 , pp. 3129-3140
    • Enver, T.1    Soneji, S.2    Joshi, C.3
  • 29
    • 77952732489 scopus 로고    scopus 로고
    • Derivation of pre-X inactivation human embryonic stem cells under physiological oxygen concentrations
    • Lengner CJ, Gimelbrant AA, Erwin JA, et al., Derivation of pre-X inactivation human embryonic stem cells under physiological oxygen concentrations. Cell 2010; 141: 872-883.
    • (2010) Cell , vol.141 , pp. 872-883
    • Lengner, C.J.1    Gimelbrant, A.A.2    Erwin, J.A.3
  • 30
    • 84863608994 scopus 로고    scopus 로고
    • Molecular signatures of human induced pluripotent stem cells highlight sex differences and cancer genes
    • Anguera MC, Sadreyev R, Zhang Z, et al., Molecular signatures of human induced pluripotent stem cells highlight sex differences and cancer genes. Cell Stem Cell 2012; 11: 75-90.
    • (2012) Cell Stem Cell , vol.11 , pp. 75-90
    • Anguera, M.C.1    Sadreyev, R.2    Zhang, Z.3
  • 31
    • 77957938684 scopus 로고    scopus 로고
    • Non-invasive imaging of human embryos before embryonic genome activation predicts development to the blastocyst stage
    • Wong CC, Loewke KE, Bossert NL, et al., Non-invasive imaging of human embryos before embryonic genome activation predicts development to the blastocyst stage. Nat Biotechnol 2010; 28: 1115-1121.
    • (2010) Nat Biotechnol , vol.28 , pp. 1115-1121
    • Wong, C.C.1    Loewke, K.E.2    Bossert, N.L.3
  • 32
    • 84871894698 scopus 로고    scopus 로고
    • Dynamic blastomere behaviour reflects human embryo ploidy by the four-cell stage
    • Chavez SL, Loewke KE, Han J, et al., Dynamic blastomere behaviour reflects human embryo ploidy by the four-cell stage. Nat Commun 2012; 3: 1251.
    • (2012) Nat Commun , vol.3 , pp. 1251
    • Chavez, S.L.1    Loewke, K.E.2    Han, J.3
  • 33
    • 79953864758 scopus 로고    scopus 로고
    • Donation of embryos for human development and stem cell research
    • Kalista T, Freeman HA, Behr B, et al., Donation of embryos for human development and stem cell research. Cell Stem Cell 2011; 8: 360-362.
    • (2011) Cell Stem Cell , vol.8 , pp. 360-362
    • Kalista, T.1    Freeman, H.A.2    Behr, B.3
  • 34
    • 84906832291 scopus 로고    scopus 로고
    • Comparison of epigenetic mediator expression and function in mouse and human embryonic blastomeres
    • Chavez SL, McElroy SL, Bossert NL, et al., Comparison of epigenetic mediator expression and function in mouse and human embryonic blastomeres. Hum Mol Genet 2014; 23: 4970-4984.
    • (2014) Hum Mol Genet , vol.23 , pp. 4970-4984
    • Chavez, S.L.1    McElroy, S.L.2    Bossert, N.L.3
  • 35
    • 3543056889 scopus 로고    scopus 로고
    • The unique transcriptome through day 3 of human preimplantation development
    • Dobson AT, Raja R, Abeyta MJ, et al., The unique transcriptome through day 3 of human preimplantation development. Hum Mol Genet 2004; 13: 1461-1470.
    • (2004) Hum Mol Genet , vol.13 , pp. 1461-1470
    • Dobson, A.T.1    Raja, R.2    Abeyta, M.J.3
  • 36
    • 84897476274 scopus 로고    scopus 로고
    • Reactivation of X chromosome upon reprogramming leads to changes in the replication pattern and 5hmC accumulation
    • Bogomazova AN, Lagarkova MA, Panova AV, et al., Reactivation of X chromosome upon reprogramming leads to changes in the replication pattern and 5hmC accumulation. Chromosoma 2014; 123: 117-128.
    • (2014) Chromosoma , vol.123 , pp. 117-128
    • Bogomazova, A.N.1    Lagarkova, M.A.2    Panova, A.V.3
  • 37
    • 0035991647 scopus 로고    scopus 로고
    • Preimplantation human embryos and embryonic stem cells show comparable expression of stage-specific embryonic antigens
    • Henderson JK, Draper JS, Baillie HS, et al., Preimplantation human embryos and embryonic stem cells show comparable expression of stage-specific embryonic antigens. Stem Cells 2002; 20: 329-337.
    • (2002) Stem Cells , vol.20 , pp. 329-337
    • Henderson, J.K.1    Draper, J.S.2    Baillie, H.S.3
  • 38
    • 84923288388 scopus 로고    scopus 로고
    • Human germ cell formation in xenotranplants of induced pluripotent stem cells carrying X chromosome aneuploidies
    • Dominguez AA, Chiang HR, Sukhwani M, et al., Human germ cell formation in xenotranplants of induced pluripotent stem cells carrying X chromosome aneuploidies. Sci Rep 2014; 4: 6432.
    • (2014) Sci Rep , vol.4 , pp. 6432
    • Dominguez, A.A.1    Chiang, H.R.2    Sukhwani, M.3
  • 39
    • 84878226536 scopus 로고    scopus 로고
    • Origins and implications of pluripotent stem cell variability and heterogeneity
    • Cahan P, Daley GQ,. Origins and implications of pluripotent stem cell variability and heterogeneity. Nat Rev Mol Cell Biol 2013; 14: 357-368.
    • (2013) Nat Rev Mol Cell Biol , vol.14 , pp. 357-368
    • Cahan, P.1    Daley, G.Q.2
  • 40
    • 42149192008 scopus 로고    scopus 로고
    • Identification and characterization of subpopulations in undifferentiated ES cell culture
    • Toyooka Y, Shimosato D, Murakami K, et al., Identification and characterization of subpopulations in undifferentiated ES cell culture. Development 2008; 135: 909-918.
    • (2008) Development , vol.135 , pp. 909-918
    • Toyooka, Y.1    Shimosato, D.2    Murakami, K.3
  • 41
    • 79952219919 scopus 로고    scopus 로고
    • Single cell transcriptional profiling reveals heterogeneity of human induced pluripotent stem cells
    • Narsinh KH, Sun N, Sanchez-Freire V, et al., Single cell transcriptional profiling reveals heterogeneity of human induced pluripotent stem cells. J Clin Invest 2011; 121: 1217-1221.
    • (2011) J Clin Invest , vol.121 , pp. 1217-1221
    • Narsinh, K.H.1    Sun, N.2    Sanchez-Freire, V.3
  • 42
    • 82755185948 scopus 로고    scopus 로고
    • Reprogramming factor stoichiometry influences the epigenetic state and biological properties of induced pluripotent stem cells
    • Carey BW, Markoulaki S, Hanna JH, et al., Reprogramming factor stoichiometry influences the epigenetic state and biological properties of induced pluripotent stem cells. Cell Stem Cell 2011; 9: 588-598.
    • (2011) Cell Stem Cell , vol.9 , pp. 588-598
    • Carey, B.W.1    Markoulaki, S.2    Hanna, J.H.3
  • 43
    • 84871339130 scopus 로고    scopus 로고
    • Residual expression of reprogramming factors affects the transcriptional program and epigenetic signatures of induced pluripotent stem cells
    • Sommer CA, Christodoulou C, Gianotti-Sommer A, et al., Residual expression of reprogramming factors affects the transcriptional program and epigenetic signatures of induced pluripotent stem cells. PloS One 2012; 7: e51711.
    • (2012) PloS One , vol.7 , pp. e51711
    • Sommer, C.A.1    Christodoulou, C.2    Gianotti-Sommer, A.3


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