-
1
-
-
33644751726
-
Transient colocalization of X-inactivation centres accompanies the initiation of X inactivation
-
DOI 10.1038/ncb1365, PII N1365
-
Bacher CP, Guggiari M, Brors B, Augui S, Clerc P, Avner P, Heard E (2006) Transient colocalization of X-inactivation centres accompanies the initiation of X inactivation. Nat Cell Biol 8:293-299 (Pubitemid 43336072)
-
(2006)
Nature Cell Biology
, vol.8
, Issue.3
, pp. 293-299
-
-
Bacher, C.P.1
Guggiari, M.2
Brors, B.3
Augui, S.4
Clerc, P.5
Avner, P.6
Eils, R.7
Heard, E.8
-
2
-
-
1542748079
-
It's all in the timing: Linking S phase to chromatin structure and chromosome dynamics
-
Bailis JM, Forsburg SL (2003) It's all in the timing: linking S phase to chromatin structure and chromosome dynamics. Cell Cycle 2:303-306
-
(2003)
Cell Cycle
, vol.2
, pp. 303-306
-
-
Bailis, J.M.1
Forsburg, S.L.2
-
3
-
-
81055127050
-
Error-prone nonhomologous end joining repair operates in human pluripotent stem cells during late G2
-
Bogomazova AN, Lagarkova MA, Tskhovrebova LV, Shutova MV, Kiselev SL (2011) Error-prone nonhomologous end joining repair operates in human pluripotent stem cells during late G2. Aging 3:584-96
-
(2011)
Aging
, vol.3
, pp. 584-596
-
-
Bogomazova, A.N.1
Lagarkova, M.A.2
Tskhovrebova, L.V.3
Shutova, M.V.4
Kiselev, S.L.5
-
4
-
-
79951511832
-
Meta-analysis of the heterogeneity of X chromosome inactivation in human pluripotent stem cells
-
Bruck T, Benvenisty N (2011) Meta-analysis of the heterogeneity of X chromosome inactivation in human pluripotent stem cells. Stem Cell Research 6:187-193
-
(2011)
Stem Cell Research
, vol.6
, pp. 187-193
-
-
Bruck, T.1
Benvenisty, N.2
-
5
-
-
79952351768
-
Histone acetylation controls the inactive X chromosome replication dynamics
-
Casas-Delucchi CS, Brero A, Rahn HP, Solovei I, Wutz A, Cremer T, Leonhardt H, Cardoso MC (2011) Histone acetylation controls the inactive X chromosome replication dynamics. Nat Commun 2:222
-
(2011)
Nat Commun
, vol.2
, pp. 222
-
-
Casas-Delucchi, C.S.1
Brero, A.2
Rahn, H.P.3
Solovei, I.4
Wutz, A.5
Cremer, T.6
Leonhardt, H.7
Cardoso, M.C.8
-
7
-
-
84871990064
-
H3K9 methylation is a barrier during somatic cell reprogramming into iPSCs
-
Chen J, LiuH, Liu J, Qi J, Wei B, Yang J, Liang H, Chen Y, Chen J, Wu Y, Guo L, Zhu J, Zhao X, Peng T, Zhang Y, Chen S, Li X, Li D, Wang T, Pei D (2012) H3K9 methylation is a barrier during somatic cell reprogramming into iPSCs. Nat Genet 45:34-42
-
(2012)
Nat Genet
, vol.45
, pp. 34-42
-
-
Chen, J.1
Liu, H.2
Liu, J.3
Qi, J.4
Wei, B.5
Yang, J.6
Liang, H.7
Chen, Y.8
Chen, J.9
Wu, Y.10
Guo, L.11
Zhu, J.12
Zhao, X.13
Peng, T.14
Zhang, Y.15
Chen, S.16
Li, X.17
Li, D.18
Wang, T.19
Pei, D.20
more..
-
8
-
-
84861234288
-
Mechanisms and consequences of widespread random monoallelic expression
-
Chess A (2012) Mechanisms and consequences of widespread random monoallelic expression. Nat Rev Genet 13:421-428
-
(2012)
Nat Rev Genet
, vol.13
, pp. 421-428
-
-
Chess, A.1
-
9
-
-
84875370281
-
NANOG-dependent function of TET1 and TET2 in establishment of pluripotency
-
Costa Y, Ding J, Theunissen TW, Faiola F, Hore TA, Shliaha PV, Fidalgo M, Saunders A, Lawrence M, Dietmann S, Das S, Levasseur DN, Li Z, Xu M, Reik W, Silva JC, Wang J (2013) NANOG-dependent function of TET1 and TET2 in establishment of pluripotency. Nature 495:370-374
-
(2013)
Nature
, vol.495
, pp. 370-374
-
-
Costa, Y.1
Ding, J.2
Theunissen, T.W.3
Faiola, F.4
Hore, T.A.5
Shliaha, P.V.6
Fidalgo, M.7
Saunders, A.8
Lawrence, M.9
Dietmann, S.10
Das, S.11
Levasseur, D.N.12
Li, Z.13
Xu, M.14
Reik, W.15
Silva, J.C.16
Wang, J.17
-
10
-
-
12144288049
-
Derivation of Embryonic Stem-Cell Lines from Human Blastocysts
-
DOI 10.1056/NEJMsr040330
-
Cowan CA, Klimanskaya I, McMahon J, Atienza J, Witmyer J, Zucker JP, Wang S, Morton CC, McMahon AP, Powers D, Melton DA (2004) Derivation of embryonic stem-cell lines from human blastocysts. N Engl J Med 350:1353-1356 (Pubitemid 38375373)
-
(2004)
New England Journal of Medicine
, vol.350
, Issue.13
, pp. 1353-1356
-
-
Cowan, C.A.1
Klimanskaya, I.2
McMahon, J.3
Atienza, J.4
Witmyer, J.5
Zucker, J.P.6
Wang, S.7
Morton, C.C.8
McMahon, A.P.9
Powers, D.10
Melton, D.A.11
-
11
-
-
84873707539
-
Combined deficiency of Tet1 and Tet2 causes epigenetic abnormalities but is compatible with postnatal development
-
Dawlaty MM, BreilingA, Le T, Raddatz G, BarrasaMI, ChengAW, GaoQ, Powell BE, Li Z, Xu M, Faull KF, Lyko F, Jaenisch R (2013) Combined deficiency of Tet1 and Tet2 causes epigenetic abnormalities but is compatible with postnatal development. Dev Cell 24:310-23
-
(2013)
Dev Cell
, vol.24
, pp. 310-323
-
-
Dawlaty, M.M.1
Breiling, A.2
Le, T.3
Raddatz, G.4
Barrasa, M.I.5
Cheng, A.W.6
Gao, Q.7
Powell, B.E.8
Li, Z.9
Xu, M.10
Faull, K.F.11
Lyko, F.12
Jaenisch, R.13
-
12
-
-
84865486793
-
Early-stage epigenetic modification during somatic cell reprogramming by Parp1 and Tet2
-
Doege CA, Inoue K, Yamashita T, Rhee DB, Travis S, Fujita R, Guamieri P, Bhagat G, VantiWB, Shih A, Levine RL, Nik S, Chen EI, Abelovich A (2012) Early-stage epigenetic modification during somatic cell reprogramming by Parp1 and Tet2. Nature 488:652-655
-
(2012)
Nature
, vol.488
, pp. 652-655
-
-
Doege, C.A.1
Inoue, K.2
Yamashita, T.3
Rhee, D.B.4
Travis, S.5
Fujita, R.6
Guamieri, P.7
Bhagat, G.8
Vanti, W.B.9
Shih, A.10
Levine, R.L.11
Nik, S.12
Chen, E.I.13
Abelovich, A.14
-
13
-
-
79961090805
-
Evolutionary diversity and developmental regulation of X-chromosome inactivation
-
Escamilla-Del-Arenal M, da Rocha ST, Heard E (2011) Evolutionary diversity and developmental regulation of X-chromosome inactivation. Hum Genet 130:307-327
-
(2011)
Hum Genet
, vol.130
, pp. 307-327
-
-
Escamilla-Del-Arenal, M.1
Da Rocha, S.T.2
Heard, E.3
-
14
-
-
79956323623
-
Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation
-
Ficz G, Branco MR, Seisenberger S, Santos F, Krueger F, Hore TA, Marques CJ, Andrews S, Reik W (2011) Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation. Nature 473:398-402
-
(2011)
Nature
, vol.473
, pp. 398-402
-
-
Ficz, G.1
Branco, M.R.2
Seisenberger, S.3
Santos, F.4
Krueger, F.5
Hore, T.A.6
Marques, C.J.7
Andrews, S.8
Reik, W.9
-
15
-
-
75649092667
-
Genome-wide dynamics of replication timing revealed by in vitro models of mouse embryogenesis
-
Hiratani I, Ryba T, Itoh M, Rathjen J, Kulik M, Papp B, Fussner E, Bazett-Jones DP, Plath K, Dalton S, Rathjen PD (2010) Genome-wide dynamics of replication timing revealed by in vitro models of mouse embryogenesis. Genome research 20:155-69
-
(2010)
Genome Research
, vol.20
, pp. 155-169
-
-
Hiratani, I.1
Ryba, T.2
Itoh, M.3
Rathjen, J.4
Kulik, M.5
Papp, B.6
Fussner, E.7
Bazett-Jones, D.P.8
Plath, K.9
Dalton, S.10
Rathjen, P.D.11
-
16
-
-
84862960971
-
The lesser known story of X chromosome reactivation: A closer look into the reprogramming of the inactive X chromosome
-
Hysolli E, Jung YW, Tanaka Y, Kim KY, Park IH (2012) The lesser known story of X chromosome reactivation: a closer look into the reprogramming of the inactive X chromosome. Cell Cycle 11:229-35
-
(2012)
Cell Cycle
, vol.11
, pp. 229-235
-
-
Hysolli, E.1
Jung, Y.W.2
Tanaka, Y.3
Kim, K.Y.4
Park, I.H.5
-
17
-
-
83255189758
-
Screening ethnically diverse human embryonic stem cells identifies a chromosome 20 minimal amplicon conferring growth advantage
-
International Stem Cell Initiative
-
International Stem Cell Initiative, Amps K, Andrews PW, Anyfantis G, Armstrong L, Avery S et al (2011) Screening ethnically diverse human embryonic stem cells identifies a chromosome 20 minimal amplicon conferring growth advantage. Nat Biotechnol 29:1132-1144
-
(2011)
Nat Biotechnol
, vol.29
, pp. 1132-1144
-
-
Amps, K.1
Andrews, P.W.2
Anyfantis, G.3
Armstrong, L.4
Avery, S.5
-
18
-
-
77956189495
-
Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification
-
Ito S, D'Alessio AC, Taranova OV, HongK, Sowers LC, Zhang Y (2010) Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification. Nature 466:1129-1133
-
(2010)
Nature
, vol.466
, pp. 1129-1133
-
-
Ito, S.1
D'Alessio, A.C.2
Taranova, O.V.3
Hong, K.4
Sowers, L.C.5
Zhang, Y.6
-
19
-
-
0034431548
-
Immunofluorescence in cytogenetic analysis: Method and applications
-
Jeppesen P (2000) Immunofluorescence in cytogenetic analysis: method and applications. Gen Mol Biol 23:1107-1114
-
(2000)
Gen Mol Biol
, vol.23
, pp. 1107-1114
-
-
Jeppesen, P.1
-
20
-
-
0030589678
-
X-Inactivation and histone H4 acetylation in embryonic stem cells
-
Keohane AM, O'neill LP, Belyaev ND, Lavender JS, Turner BM (1996) X-Inactivation and histone H4 acetylation in embryonic stem cells. Dev Biol 180:618-630
-
(1996)
Dev Biol
, vol.180
, pp. 618-630
-
-
Keohane, A.M.1
O'Neill, L.P.2
Belyaev, N.D.3
Lavender, J.S.4
Turner, B.M.5
-
21
-
-
84875878011
-
Chromosome-wide regulation of euchromatin-specific 5mC to 5hmC conversion in mouse ES cells and female human somatic cells
-
Kubiura M, Okano M, Kimura H, Kawamura F, Tada M (2012) Chromosome-wide regulation of euchromatin-specific 5mC to 5hmC conversion in mouse ES cells and female human somatic cells. Chromosome Res 20:837-48
-
(2012)
Chromosome Res
, vol.20
, pp. 837-848
-
-
Kubiura, M.1
Okano, M.2
Kimura, H.3
Kawamura, F.4
Tada, M.5
-
22
-
-
77952099409
-
Human embryonic stem cell lines isolation, cultivation, and characterization
-
Lagarkova MA, Eremeev AV, Svetlakov AV, Rubtsov NB, Kiselev SL (2010a) Human embryonic stem cell lines isolation, cultivation, and characterization. In Vitro Cell Dev Biol Anim 46:284-293
-
(2010)
In Vitro Cell Dev Biol Anim
, vol.46
, pp. 284-293
-
-
Lagarkova, M.A.1
Eremeev, A.V.2
Svetlakov, A.V.3
Rubtsov, N.B.4
Kiselev, S.L.5
-
23
-
-
77953500860
-
Induction of pluripotency in human endothelial cells resets epigenetic profile on genome scale
-
Lagarkova MA, Shutova MV, Bogomazova AN, Vassina EM, Glazov EA, Zhang P, Rizvanov AA, Chestkov IV, Kiselev SL (2010b) Induction of pluripotency in human endothelial cells resets epigenetic profile on genome scale. Cell cycle 9:937-946
-
(2010)
Cell Cycle
, vol.9
, pp. 937-946
-
-
Lagarkova, M.A.1
Shutova, M.V.2
Bogomazova, A.N.3
Vassina, E.M.4
Glazov, E.A.5
Zhang, P.6
Rizvanov, A.A.7
Chestkov, I.V.8
Kiselev, S.L.9
-
24
-
-
84864867828
-
Establishment of epigenetic patterns in development
-
Leeb M, Wutz A (2012) Establishment of epigenetic patterns in development. Chromosoma 121:251-262
-
(2012)
Chromosoma
, vol.121
, pp. 251-262
-
-
Leeb, M.1
Wutz, A.2
-
25
-
-
84882245890
-
Genetic and epigenetic stability of human pluripotent stem cells
-
Lund RJ, Närvä E, Lahesmaa R (2012) Genetic and epigenetic stability of human pluripotent stem cells. Nat Rev Genet 13:732-744
-
(2012)
Nat Rev Genet
, vol.13
, pp. 732-744
-
-
Lund, R.J.1
Närvä, E.2
Lahesmaa, R.3
-
26
-
-
78149488365
-
A Model for neural development and treatment of Rett syndrome using human induced pluripotent stem cells
-
Marchetto MC, Carromeu C, Acab A, Yu D, Yeo GW, Mu Y, Chen G, Gage FH, Muotri AR (2010) A Model for neural development and treatment of Rett syndrome using human induced pluripotent stem cells. Cell 143:527-539
-
(2010)
Cell
, vol.143
, pp. 527-539
-
-
Marchetto, M.C.1
Carromeu, C.2
Acab, A.3
Yu, D.4
Yeo, G.W.5
Mu, Y.6
Chen, G.7
Gage, F.H.8
Muotri, A.R.9
-
27
-
-
84860640679
-
Erosion of dosage compensation impacts human iPSC disease modeling
-
Mekhoubad S, Bock C, de Boer AS, Kiskinis E, Meissner A, Eggan K (2012) Erosion of dosage compensation impacts human iPSC disease modeling. Cell Stem Cell 10:595-609
-
(2012)
Cell Stem Cell
, vol.10
, pp. 595-609
-
-
Mekhoubad, S.1
Bock, C.2
De Boer, A.S.3
Kiskinis, E.4
Meissner, A.5
Eggan, K.6
-
28
-
-
34249279527
-
Stability and flexibility of epigenetic gene regulation in mammalian development
-
Reik W (2007) Stability and flexibility of epigenetic gene regulation in mammalian development. Nature 447:425-432
-
(2007)
Nature
, vol.447
, pp. 425-432
-
-
Reik, W.1
-
29
-
-
80053545055
-
DNA methylation profiles of human active and inactive X chromosomes
-
Sharp AJ, Stathaki E, Migliavacca E, Brahmachary M, Montgomery SB, Dupre Y, Antonarakis SE (2011) DNA methylation profiles of human active and inactive X chromosomes. Genome Res 21:1592-600
-
(2011)
Genome Res
, vol.21
, pp. 1592-1600
-
-
Sharp, A.J.1
Stathaki, E.2
Migliavacca, E.3
Brahmachary, M.4
Montgomery, S.B.5
Dupre, Y.6
Antonarakis, S.E.7
-
30
-
-
68749110887
-
Nanog is the gateway to the pluripotent ground state
-
Silva J, Nichols J, Theunissen TW, Guo G, Van Oosten AL, Barrandon O, Wray J, Yamanaka S, Chambers I, Smith A (2009) Nanog is the gateway to the pluripotent ground state. Cell 138:722-737
-
(2009)
Cell
, vol.138
, pp. 722-737
-
-
Silva, J.1
Nichols, J.2
Theunissen, T.W.3
Guo, G.4
Van Oosten, A.L.5
Barrandon, O.6
Wray, J.7
Yamanaka, S.8
Chambers, I.9
Smith, A.10
-
31
-
-
42449134974
-
X-chromosome inactivation and epigenetic fluidity in human embryonic stem cells
-
DOI 10.1073/pnas.0712136105
-
Silva SS, Rowntree RK, Mekhoubad S, Lee JT (2008) X-chromosome inactivation and epigenetic fluidity in human embryonic stem cells. Proc Natl Acad Sci U S A 105:4820-4825 (Pubitemid 351753830)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.12
, pp. 4820-4825
-
-
Silva, S.S.1
Rowntree, R.K.2
Mekhoubad, S.3
Lee, J.T.4
-
32
-
-
84870058502
-
Facilitators and impediments of the pluripotency reprogramming factors' initial engagement with the genome
-
Soufi A, Donahue G, ZaretKS (2012) Facilitators and impediments of the pluripotency reprogramming factors' initial engagement with the genome. Cell 151:994-1004
-
(2012)
Cell
, vol.151
, pp. 994-1004
-
-
Soufi, A.1
Donahue, G.2
Zaret, K.S.3
-
33
-
-
79959209733
-
5-hydroxymethylcytosine is associated with enhancers and gene bodies in human embryonic stem cells
-
Stroud H, Feng S, Morey Kinney S, Pradhan S, Jacobsen SE (2011) 5-hydroxymethylcytosine is associated with enhancers and gene bodies in human embryonic stem cells. Genome Biol 12:R54
-
(2011)
Genome Biol
, vol.12
-
-
Stroud, H.1
Feng, S.2
Morey Kinney, S.3
Pradhan, S.4
Jacobsen, S.E.5
-
34
-
-
79959859654
-
Integrating 5-hydroxymethylcytosine into the epigenomic landscape of human embryonic stem cells
-
Szulwach KE, Li X, Li Y, Song CX, Han JW, Kim S, Namburi S, Hermetz K, Kim JJ, Rudd MK, Yoon YS, Ren B, He C, Jin P (2011) Integrating 5-hydroxymethylcytosine into the epigenomic landscape of human embryonic stem cells. PLoS genetics 7(6):e1002154
-
(2011)
PLoS Genetics
, vol.7
, Issue.6
-
-
Szulwach, K.E.1
Li, X.2
Li, Y.3
Song, C.X.4
Han, J.W.5
Kim, S.6
Namburi, S.7
Hermetz, K.8
Kim, J.J.9
Rudd, M.K.10
Yoon, Y.S.11
Ren, B.12
He, C.13
Jin, P.14
-
35
-
-
33747195353
-
Induction of Pluripotent Stem Cells from Mouse Embryonic and Adult Fibroblast Cultures by Defined Factors
-
DOI 10.1016/j.cell.2006.07.024, PII S0092867406009767
-
Takahashi K, Yamanaka S (2006) Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell 126:663-676 (Pubitemid 44233629)
-
(2006)
Cell
, vol.126
, Issue.4
, pp. 663-676
-
-
Takahashi, K.1
Yamanaka, S.2
-
36
-
-
77956222202
-
Female human iPSCs retain an inactive X chromosome
-
Tchieu J, Kuoy E, Chin MH, Trinh H, Patterson M, Sherman SP, Aimiuwu O, Lindgren A, Hakimian S, Zack JA (2010) Female human iPSCs retain an inactive X chromosome. Cell Stem Cell 7:329-342
-
(2010)
Cell Stem Cell
, vol.7
, pp. 329-342
-
-
Tchieu, J.1
Kuoy, E.2
Chin, M.H.3
Trinh, H.4
Patterson, M.5
Sherman, S.P.6
Aimiuwu, O.7
Lindgren, A.8
Hakimian, S.9
Zack, J.A.10
-
37
-
-
80053932327
-
Suppression of the imprinted gene NNAT and X-chromosome gene activation in isogenic human iPS cells
-
doi:10.1371/journal.pone.0023436
-
Teichroeb JH, Betts DH, Vaziri H (2011) Suppression of the imprinted gene NNAT and X-chromosome gene activation in isogenic human iPS cells. PLoS One 6:e23436. doi:10.1371/journal.pone.0023436
-
(2011)
PLoS One
, vol.6
-
-
Teichroeb, J.H.1
Betts, D.H.2
Vaziri, H.3
-
38
-
-
84863615190
-
Derivation conditions impact X-inactivation status in female human induced pluripotent stem cells
-
Tomoda K, Takahashi K, Leung K, Okada A, Narita M, Yamada NA, Eilertson KE, Tsang P, Baba S, White MP, Sami S, Srivastava D, Conklin BR, Panning B, Yamanaka S (2012) Derivation conditions impact X-inactivation status in female human induced pluripotent stem cells. Cell Stem Cell 11:91-99
-
(2012)
Cell Stem Cell
, vol.11
, pp. 91-99
-
-
Tomoda, K.1
Takahashi, K.2
Leung, K.3
Okada, A.4
Narita, M.5
Yamada, N.A.6
Eilertson, K.E.7
Tsang, P.8
Baba, S.9
White, M.P.10
Sami, S.11
Srivastava, D.12
Conklin, B.R.13
Panning, B.14
Yamanaka, S.15
-
39
-
-
0017126281
-
Analysis of deoxyribonucleic acid replication in human X chromosomes by fluorescence microscopy
-
Willard HF, Latt SA (1976) Analysis of deoxyribonucleic acid replication in human X chromosomes by fluorescence microscopy. Am J Hum Genet 28:213-227
-
(1976)
Am J Hum Genet
, vol.28
, pp. 213-227
-
-
Willard, H.F.1
Latt, S.A.2
-
40
-
-
79960484375
-
Gene silencing in X-chromosome inactivation: Advances in understanding facultative heterochromatin formation
-
Wutz A (2011) Gene silencing in X-chromosome inactivation: advances in understanding facultative heterochromatin formation. Nat Rev Genet 12:542-553
-
(2011)
Nat Rev Genet
, vol.12
, pp. 542-553
-
-
Wutz, A.1
|