-
1
-
-
77949512140
-
RNA targeting therapeutics: Molecular mechanisms of antisense oligonucleotides as a therapeutic platform
-
Bennett, C. F. and Swayze, E. E. (2010) RNA targeting therapeutics: molecular mechanisms of antisense oligonucleotides as a therapeutic platform Annu. Rev. Pharmacol. Toxicol. 50, 259 - 293
-
(2010)
Annu. Rev. Pharmacol. Toxicol.
, vol.50
, pp. 259-293
-
-
Bennett, C.F.1
Swayze, E.E.2
-
2
-
-
0034015113
-
Phosphorothioate oligonucleotides: What is their origin and what is unique about them?
-
Eckstein, F. (2000) Phosphorothioate oligonucleotides: what is their origin and what is unique about them? Antisense Nucleic Acid Drug Dev. 10, 117 - 121
-
(2000)
Antisense Nucleic Acid Drug Dev.
, vol.10
, pp. 117-121
-
-
Eckstein, F.1
-
3
-
-
0033213981
-
Properties of cloned and expressed human RNase H1
-
Wu, H., Lima, W. F., and Crooke, S. T. (1999) Properties of cloned and expressed human RNase H1 J. Biol. Chem. 274, 28270 - 28278
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 28270-28278
-
-
Wu, H.1
Lima, W.F.2
Crooke, S.T.3
-
4
-
-
0033053332
-
Crystal structure and improved antisense properties of 2′-O-(2-methoxyethyl)-RNA
-
Teplova, M., Minasov, G., Tereshko, V., Inamati, G. B., Cook, P. D., Manoharan, M., and Egli, M. (1999) Crystal structure and improved antisense properties of 2′-O-(2-methoxyethyl)-RNA Nat. Struct. Biol. 6, 535 - 539
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 535-539
-
-
Teplova, M.1
Minasov, G.2
Tereshko, V.3
Inamati, G.B.4
Cook, P.D.5
Manoharan, M.6
Egli, M.7
-
5
-
-
59449093219
-
Short antisense oligonucleotides with novel 2′-4′ conformationaly restricted nucleoside analogues show improved potency without increased toxicity in animals
-
Seth, P. P., Siwkowski, A., Allerson, C. R., Vasquez, G., Lee, S., Prakash, T. P., Wancewicz, E. V., Witchell, D., and Swayze, E. E. (2009) Short antisense oligonucleotides with novel 2′-4′ conformationaly restricted nucleoside analogues show improved potency without increased toxicity in animals J. Med. Chem. 52, 10 - 13
-
(2009)
J. Med. Chem.
, vol.52
, pp. 10-13
-
-
Seth, P.P.1
Siwkowski, A.2
Allerson, C.R.3
Vasquez, G.4
Lee, S.5
Prakash, T.P.6
Wancewicz, E.V.7
Witchell, D.8
Swayze, E.E.9
-
6
-
-
84880668457
-
Clinical pharmacological properties of mipomersen (Kynamro), a second generation antisense inhibitor of apolipoprotein B
-
Crooke, S. T. and Geary, R. S. (2013) Clinical pharmacological properties of mipomersen (Kynamro), a second generation antisense inhibitor of apolipoprotein B Br. J. Clin. Pharmacol. 76, 269 - 276
-
(2013)
Br. J. Clin. Pharmacol.
, vol.76
, pp. 269-276
-
-
Crooke, S.T.1
Geary, R.S.2
-
7
-
-
0035138215
-
Comparison of pharmacokinetics and tissue disposition of an antisense phosphorothioate oligonucleotide targeting human Ha-ras mRNA in mouse and monkey
-
Yu, R. Z., Geary, R. S., Leeds, J. M., Watanabe, T., Moore, M., Fitchett, J., Matson, J., Burckin, T., Templin, M. V., and Levin, A. A. (2001) Comparison of pharmacokinetics and tissue disposition of an antisense phosphorothioate oligonucleotide targeting human Ha-ras mRNA in mouse and monkey J. Pharm. Sci. 90, 182 - 193
-
(2001)
J. Pharm. Sci.
, vol.90
, pp. 182-193
-
-
Yu, R.Z.1
Geary, R.S.2
Leeds, J.M.3
Watanabe, T.4
Moore, M.5
Fitchett, J.6
Matson, J.7
Burckin, T.8
Templin, M.V.9
Levin, A.A.10
-
8
-
-
33847338002
-
Cross-species pharmacokinetic comparison from mouse to man of a second-generation antisense oligonucleotide, ISIS 301012, targeting human apolipoprotein B-100
-
Yu, R. Z., Kim, T.-W., Hong, A., Watanabe, T. A., Gaus, H. J., and Geary, R. S. (2007) Cross-species pharmacokinetic comparison from mouse to man of a second-generation antisense oligonucleotide, ISIS 301012, targeting human apolipoprotein B-100 Drug Metab. Dispos. 35, 460 - 468
-
(2007)
Drug Metab. Dispos.
, vol.35
, pp. 460-468
-
-
Yu, R.Z.1
Kim, T.-W.2
Hong, A.3
Watanabe, T.A.4
Gaus, H.J.5
Geary, R.S.6
-
9
-
-
0031752643
-
Co-administration of polyanions with a phosphorothioate oligodeoxynucleotide (CGP 69846A): A role for the scavenger receptor in its in vivo disposition
-
Steward, A., Christian, R. A., Hamilton, K. O., and Nicklin, P. L. (1998) Co-administration of polyanions with a phosphorothioate oligodeoxynucleotide (CGP 69846A): a role for the scavenger receptor in its in vivo disposition Biochem. Pharmacol. 56, 509 - 516
-
(1998)
Biochem. Pharmacol.
, vol.56
, pp. 509-516
-
-
Steward, A.1
Christian, R.A.2
Hamilton, K.O.3
Nicklin, P.L.4
-
10
-
-
0030751852
-
In vivo fate of phosphorothioate antisense oligodeoxynucleotides: Predominant uptake by scavenger receptors on endothelial liver cells
-
Bijsterbosch, M. K., Manoharan, M., Rump, E. T., De Vrueh, R. L., van Veghel, R., Tivel, K. L., Biessen, E. A., Bennett, C. F., Cook, P. D., and van Berkel, T. J. (1997) In vivo fate of phosphorothioate antisense oligodeoxynucleotides: predominant uptake by scavenger receptors on endothelial liver cells Nucleic Acids Res. 25, 3290 - 3296
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3290-3296
-
-
Bijsterbosch, M.K.1
Manoharan, M.2
Rump, E.T.3
De Vrueh, R.L.4
Van Veghel, R.5
Tivel, K.L.6
Biessen, E.A.7
Bennett, C.F.8
Cook, P.D.9
Van Berkel, T.J.10
-
11
-
-
79959479529
-
Mechanism of single-stranded phosphorothioate modified antisense oligonucleotide accumulation in hepatocytes
-
Koller, E., Vincent, T. M., Chappell, A., De, S., Manoharan, M., and Bennett, C. F. (2011) Mechanism of single-stranded phosphorothioate modified antisense oligonucleotide accumulation in hepatocytes Nucleic Acids Res. 39, 4795 - 4807
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 4795-4807
-
-
Koller, E.1
Vincent, T.M.2
Chappell, A.3
De, S.4
Manoharan, M.5
Bennett, C.F.6
-
12
-
-
0029670262
-
Molecular beacons: Probes that fluoresce upon hybridization
-
Tyagi, S. and Kramer, F. R. (1996) Molecular beacons: probes that fluoresce upon hybridization Nat. Biotechnol. 14, 303 - 308
-
(1996)
Nat. Biotechnol.
, vol.14
, pp. 303-308
-
-
Tyagi, S.1
Kramer, F.R.2
-
13
-
-
58349084656
-
Molecular engineering of DNA: Molecular beacons
-
Wang, K., Tang, Z., Yang, C. J., Kim, Y., Fang, X., Li, W., Wu, Y., Medley, C. D., Cao, Z., Li, J., Colon, P., Lin, H., and Tan, W. (2009) Molecular engineering of DNA: molecular beacons Angew. Chem., Int. Ed. 48, 856 - 870
-
(2009)
Angew. Chem., Int. Ed.
, vol.48
, pp. 856-870
-
-
Wang, K.1
Tang, Z.2
Yang, C.J.3
Kim, Y.4
Fang, X.5
Li, W.6
Wu, Y.7
Medley, C.D.8
Cao, Z.9
Li, J.10
Colon, P.11
Lin, H.12
Tan, W.13
-
14
-
-
0036835759
-
Efficiencies of fluorescence resonance energy transfer and contact-mediated quenching in oligonucleotide probes
-
Marras, S. A. E., Kramer, F. R., and Tyagi, S. (2002) Efficiencies of fluorescence resonance energy transfer and contact-mediated quenching in oligonucleotide probes Nucleic Acids Res. 30, e122
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. e122
-
-
Marras, S.A.E.1
Kramer, F.R.2
Tyagi, S.3
-
15
-
-
33845883545
-
Human RNase H1 discriminates between subtle variations in the structure of the heteroduplex substrate
-
Lima, W. F., Rose, J. B., Nichols, J. G., Wu, H., Migawa, M. T., Wyrzykiewicz, T. K., Siwkowski, A. M., and Crooke, S. T. (2007) Human RNase H1 discriminates between subtle variations in the structure of the heteroduplex substrate Mol. Pharmacol. 71, 83 - 91
-
(2007)
Mol. Pharmacol.
, vol.71
, pp. 83-91
-
-
Lima, W.F.1
Rose, J.B.2
Nichols, J.G.3
Wu, H.4
Migawa, M.T.5
Wyrzykiewicz, T.K.6
Siwkowski, A.M.7
Crooke, S.T.8
-
16
-
-
0034677706
-
Molecular beacons a novel approach to detect protein - DNA interactions
-
Li, J. J., Fang, X., Schuster, S. M., and Tan, W. (2000) Molecular beacons a novel approach to detect protein-DNA interactions Angew. Chem., Int. Ed. 39, 1049 - 1052
-
(2000)
Angew. Chem., Int. Ed.
, vol.39
, pp. 1049-1052
-
-
Li, J.J.1
Fang, X.2
Schuster, S.M.3
Tan, W.4
-
17
-
-
77949297395
-
Synthesis and biophysical evaluation of 2′,4′-constrained 2′O-methoxyethyl and 2′,4′-constrained 2′O-ethyl nucleic acid analogues
-
Seth, P. P., Vasquez, G., Allerson, C. A., Berdeja, A., Gaus, H., Kinberger, G. A., Prakash, T. P., Migawa, M. T., Bhat, B., and Swayze, E. E. (2010) Synthesis and biophysical evaluation of 2′,4′-constrained 2′O-methoxyethyl and 2′,4′-constrained 2′O-ethyl nucleic acid analogues J. Org. Chem. 75, 1569 - 1581
-
(2010)
J. Org. Chem.
, vol.75
, pp. 1569-1581
-
-
Seth, P.P.1
Vasquez, G.2
Allerson, C.A.3
Berdeja, A.4
Gaus, H.5
Kinberger, G.A.6
Prakash, T.P.7
Migawa, M.T.8
Bhat, B.9
Swayze, E.E.10
-
18
-
-
0024296609
-
Physicochemical properties of phosphorothioate oligonucleotides
-
Stein, C. A., Subasinghe, C., Shinozuka, K., and Cohen, J. S. (1988) Physicochemical properties of phosphorothioate oligonucleotides Nucleic Acids Res. 16, 3209 - 3221
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 3209-3221
-
-
Stein, C.A.1
Subasinghe, C.2
Shinozuka, K.3
Cohen, J.S.4
-
19
-
-
34548103208
-
Hairpin DNAzymes: A new tool for efficient cellular gene silencing
-
Abdelgany, A., Wood, M., and Beeson, D. (2007) Hairpin DNAzymes: a new tool for efficient cellular gene silencing J. Gene Med. 9, 727 - 738
-
(2007)
J. Gene Med.
, vol.9
, pp. 727-738
-
-
Abdelgany, A.1
Wood, M.2
Beeson, D.3
-
20
-
-
84886501627
-
Cellular delivery and photochemical activation of antisense agents through a nucleobase caging strategy
-
Govan, J. M., Uprety, R., Thomas, M., Lusic, H., Lively, M. O., and Deiters, A. (2013) Cellular delivery and photochemical activation of antisense agents through a nucleobase caging strategy ACS Chem. Biol. 8, 2272 - 2282
-
(2013)
ACS Chem. Biol.
, vol.8
, pp. 2272-2282
-
-
Govan, J.M.1
Uprety, R.2
Thomas, M.3
Lusic, H.4
Lively, M.O.5
Deiters, A.6
-
21
-
-
0033033430
-
Thermodynamic basis of the enhanced specificity of structured DNA probes
-
Bonnet, G., Tyagi, S., Libchaber, A., and Kramer, F. R. (1999) Thermodynamic basis of the enhanced specificity of structured DNA probes Proc. Natl. Acad. Sci. U.S.A. 96, 6171 - 6176
-
(1999)
Proc. Natl. Acad. Sci. U.S.A.
, vol.96
, pp. 6171-6176
-
-
Bonnet, G.1
Tyagi, S.2
Libchaber, A.3
Kramer, F.R.4
-
22
-
-
82955237522
-
Potent and selective antisense oligonucleotides targeting single-nucleotide polymorphisms in the Huntington disease gene/allele-specific silencing of mutant huntingtin
-
Carroll, J. B., Warby, S. C., Southwell, A. L., Doty, C. N., Greenlee, S., Skotte, N., Hung, G., Bennett, C. F., Freier, S. M., and Hayden, M. R. (2011) Potent and selective antisense oligonucleotides targeting single-nucleotide polymorphisms in the Huntington disease gene/allele-specific silencing of mutant huntingtin Mol. Ther. 19, 2178 - 2185
-
(2011)
Mol. Ther.
, vol.19
, pp. 2178-2185
-
-
Carroll, J.B.1
Warby, S.C.2
Southwell, A.L.3
Doty, C.N.4
Greenlee, S.5
Skotte, N.6
Hung, G.7
Bennett, C.F.8
Freier, S.M.9
Hayden, M.R.10
-
23
-
-
84890057093
-
Rational design of antisense oligonucleotides targeting single nucleotide polymorphisms for potent and selective suppression of mutant huntingtin in the CNS
-
Ostergaard, M. E., Southwell, A. L., Kordasiewicz, H., Watt, A. T., Skotte, N. H., Doty, C. N., Vaid, K., Villanueva, E. B., Swayze, E. E., Bennett, C. F., Hayden, M. R., and Seth, P. P. (2013) Rational design of antisense oligonucleotides targeting single nucleotide polymorphisms for potent and selective suppression of mutant huntingtin in the CNS Nucleic Acids Res. 41, 9634 - 9650
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. 9634-9650
-
-
Østergaard, M.E.1
Southwell, A.L.2
Kordasiewicz, H.3
Watt, A.T.4
Skotte, N.H.5
Doty, C.N.6
Vaid, K.7
Villanueva, E.B.8
Swayze, E.E.9
Bennett, C.F.10
Hayden, M.R.11
Seth, P.P.12
-
24
-
-
84871214247
-
A fully humanized transgenic mouse model of Huntington disease
-
Southwell, A. L., Warby, S. C., Carroll, J. B., Doty, C. N., Skotte, N. H., Zhang, W., Villanueva, E. B., Kovalik, V., Xie, Y., Pouladi, M. A., et al. 2013, A fully humanized transgenic mouse model of Huntington disease Hum. Mol. Genet. 22, 18 - 34
-
(2013)
Hum. Mol. Genet.
, vol.22
, pp. 18-34
-
-
Southwell, A.L.1
Warby, S.C.2
Carroll, J.B.3
Doty, C.N.4
Skotte, N.H.5
Zhang, W.6
Villanueva, E.B.7
Kovalik, V.8
Xie, Y.9
Pouladi, M.A.10
-
25
-
-
0027480960
-
A novel gene containing a trinucleotide repeat that is expanded and unstable on Huntington's disease chromosome
-
MacDonald, M. E., Ambrose, C. M., Duyao, M. P., Myers, R. H., Lin, C., Srinidhi, L., Barnes, G., Taylor, S. A., James, M., Groot, N., MacFarlane, H., Jenkins, B., Anderson, M. A., Wexler, N. S., and Gusella, J. F. (1993) A novel gene containing a trinucleotide repeat that is expanded and unstable on Huntington's disease chromosome Cell 72, 971 - 983
-
(1993)
Cell
, vol.72
, pp. 971-983
-
-
MacDonald, M.E.1
Ambrose, C.M.2
Duyao, M.P.3
Myers, R.H.4
Lin, C.5
Srinidhi, L.6
Barnes, G.7
Taylor, S.A.8
James, M.9
Groot, N.10
MacFarlane, H.11
Jenkins, B.12
Anderson, M.A.13
Wexler, N.S.14
Gusella, J.F.15
-
26
-
-
33846225133
-
Huntington's disease
-
Walker, F. O. (2007) Huntington's disease Lancet 369, 218 - 228
-
(2007)
Lancet
, vol.369
, pp. 218-228
-
-
Walker, F.O.1
-
27
-
-
0030937876
-
Characterization of oligonucleotide metabolism in vivo via liquid chromatography/electrospray tandem mass spectrometry with a quadrupole ion trap mass spectromenter
-
Griffey, R. H., Greig, M. J., Gaus, H. J., Liu, K., Monteith, D., Winniman, M., and Cummins, L. L. (1997) Characterization of oligonucleotide metabolism in vivo via liquid chromatography/electrospray tandem mass spectrometry with a quadrupole ion trap mass spectromenter J. Mass. Spectrom. 32, 305 - 313
-
(1997)
J. Mass. Spectrom.
, vol.32
, pp. 305-313
-
-
Griffey, R.H.1
Greig, M.J.2
Gaus, H.J.3
Liu, K.4
Monteith, D.5
Winniman, M.6
Cummins, L.L.7
-
28
-
-
84927177598
-
In vivo evaluation of candidate allele-specific mutant huntingtin gene silencing antisense oligonucleotides
-
Southwell, A. L., Skotte, N. H., Kordasiewicz, H. B., Ostergaard, M. E., Watt, A. T., Carroll, J. B., Doty, C. N., Villanueva, E. B., Petoukhov, E., Kuljeet, V., et al. (2014) In vivo evaluation of candidate allele-specific mutant huntingtin gene silencing antisense oligonucleotides. Mol. Ther. 22, DOI: 10.1038/mt.2014.153.
-
(2014)
Mol. Ther.
, vol.22
-
-
Southwell, A.L.1
Skotte, N.H.2
Kordasiewicz, H.B.3
Østergaard, M.E.4
Watt, A.T.5
Carroll, J.B.6
Doty, C.N.7
Villanueva, E.B.8
Petoukhov, E.9
Kuljeet, V.10
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