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Volumn 7, Issue 2, 2015, Pages 557-566

Genome rearrangements can make and break small RNA genes

Author keywords

E. coli; gene origination; intergenic regions; Salmonella; sRNA

Indexed keywords

BACTERIA (MICROORGANISMS); ENTEROBACTERIACEAE; ESCHERICHIA COLI; SALMONELLA; SALMONELLA ENTERICA;

EID: 84928253552     PISSN: None     EISSN: 17596653     Source Type: Journal    
DOI: 10.1093/gbe/evv009     Document Type: Article
Times cited : (20)

References (60)
  • 1
    • 1542472730 scopus 로고    scopus 로고
    • New connections in the prokaryotic toxin-antitoxin network: Relationship with the eukaryotic nonsensemediated RNA decay system
    • Anantharaman V, Aravind L. 2003. New connections in the prokaryotic toxin-antitoxin network: relationship with the eukaryotic nonsensemediated RNA decay system. Genome Biol. 4:R81.
    • (2003) Genome Biol. , vol.4 , pp. R81
    • Anantharaman, V.1    Aravind, L.2
  • 2
    • 77958471357 scopus 로고    scopus 로고
    • Differential expression analysis for sequence count data
    • Anders S, Huber W. 2010. Differential expression analysis for sequence count data. Genome Biol. 11:R106.
    • (2010) Genome Biol. , vol.11 , pp. R106
    • Anders, S.1    Huber, W.2
  • 3
    • 31544450286 scopus 로고    scopus 로고
    • Construction of Escherichia coli K-12 in-frame, singlegene knockout mutants: The Keio collection
    • Baba T, et al. 2006. Construction of Escherichia coli K-12 in-frame, singlegene knockout mutants: the Keio collection. Mol Syst Biol. 2: 1216-1226.
    • (2006) Mol Syst Biol. , vol.2 , pp. 1216-1226
    • Baba, T.1
  • 4
    • 77649206429 scopus 로고    scopus 로고
    • Conditions for the evolution of gene clusters in bacterial genomes
    • Ballouz S, Francis AR, Lan R, Tanaka MM. 2010. Conditions for the evolution of gene clusters in bacterial genomes. PLoS Comput Biol. 6:e1000672.
    • (2010) PLoS Comput Biol. , vol.6
    • Ballouz, S.1    Francis, A.R.2    Lan, R.3    Tanaka, M.M.4
  • 5
    • 79251559383 scopus 로고    scopus 로고
    • The base-pairing RNA spot 42 participates in a multioutput feedforward loop to help enact catabolite repression in Escherichia coli
    • Beisel CL, Storz G. 2011. The base-pairing RNA spot 42 participates in a multioutput feedforward loop to help enact catabolite repression in Escherichia coli. Mol Cell. 41:286-297.
    • (2011) Mol Cell. , vol.41 , pp. 286-297
    • Beisel, C.L.1    Storz, G.2
  • 6
    • 84866944595 scopus 로고    scopus 로고
    • Genomic analysis of a key innovation in an experimental Escherichia coli population
    • Blount ZD, Barrick JE, Davidson CJ, Lenski RE. 2012. Genomic analysis of a key innovation in an experimental Escherichia coli population. Nature 489:513-518.
    • (2012) Nature , vol.489 , pp. 513-518
    • Blount, Z.D.1    Barrick, J.E.2    Davidson, C.J.3    Lenski, R.E.4
  • 7
    • 84875582587 scopus 로고    scopus 로고
    • The adaptation of temperate bacteriophages to their host genomes
    • Bobay LM, Rocha EP, Touchon M. 2013. The adaptation of temperate bacteriophages to their host genomes. Mol Biol Evol. 30:737-751.
    • (2013) Mol Biol Evol. , vol.30 , pp. 737-751
    • Bobay, L.M.1    Rocha, E.P.2    Touchon, M.3
  • 8
    • 4544321685 scopus 로고    scopus 로고
    • Phages and the evolution of bacterial pathogens: From genomic rearrangements to lysogenic conversion
    • Brüssow H, Canchaya C, Hardt WD. 2004. Phages and the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion. Microbiol Mol Biol Rev. 68:560-602.
    • (2004) Microbiol Mol Biol Rev. , vol.68 , pp. 560-602
    • Brüssow, H.1    Canchaya, C.2    Hardt, W.D.3
  • 9
    • 84867577054 scopus 로고    scopus 로고
    • An atlas of Hfq-bound transcripts reveals 30 UTRs as a genomic reservoir of regulatory small RNAs
    • Chao Y, Papenfort K, Reinhardt R, Sharma CM, Vogel J. 2012. An atlas of Hfq-bound transcripts reveals 30 UTRs as a genomic reservoir of regulatory small RNAs. EMBO J. 31:4005-4019.
    • (2012) EMBO J. , vol.31 , pp. 4005-4019
    • Chao, Y.1    Papenfort, K.2    Reinhardt, R.3    Sharma, C.M.4    Vogel, J.5
  • 10
    • 33646184857 scopus 로고    scopus 로고
    • A reassessment of the FNR regulon and transcriptomic analysis of the effects of nitrate, nitrite, NarXL, and NarQP as Escherichia coli K12 adapts from aerobic to anaerobic growth
    • Constantinidou C, et al. 2006. A reassessment of the FNR regulon and transcriptomic analysis of the effects of nitrate, nitrite, NarXL, and NarQP as Escherichia coli K12 adapts from aerobic to anaerobic growth. J Biol Chem. 281:4802-4815.
    • (2006) J Biol Chem. , vol.281 , pp. 4802-4815
    • Constantinidou, C.1
  • 11
    • 0034612342 scopus 로고    scopus 로고
    • One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
    • Datsenko KA, Wanner B. 2000. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci U S A. 97:6640-6645.
    • (2000) Proc Natl Acad Sci U S A. , vol.97 , pp. 6640-6645
    • Datsenko, K.A.1    Wanner, B.2
  • 12
    • 84875457350 scopus 로고    scopus 로고
    • Bacterial small RNA-based negative regulation: Hfq and its accomplices
    • De Lay N, Schu DJ, Gottesman S. 2013. Bacterial small RNA-based negative regulation: Hfq and its accomplices. J Biol Chem. 288:7996-8003.
    • (2013) J Biol Chem. , vol.288 , pp. 7996-8003
    • De Lay, N.1    Schu, D.J.2    Gottesman, S.3
  • 14
    • 77349104885 scopus 로고    scopus 로고
    • Reprogramming of anaerobicmetabolismby the FnrS small RNA
    • Durand S, Storz G. 2010. Reprogramming of anaerobicmetabolismby the FnrS small RNA. Mol Microbiol. 75:1215-1231.
    • (2010) Mol Microbiol. , vol.75 , pp. 1215-1231
    • Durand, S.1    Storz, G.2
  • 15
    • 84875737333 scopus 로고    scopus 로고
    • Salmonella enterica serovar Typhimurium skills to succeed in the host: Virulence and regulation
    • Fà brega A, Vila J. 2013. Salmonella enterica serovar Typhimurium skills to succeed in the host: virulence and regulation. Clin Microbiol Rev. 26: 308-341.
    • (2013) Clin Microbiol Rev. , vol.26 , pp. 308-341
    • Fà Brega, A.1    Vila, J.2
  • 16
    • 84863924309 scopus 로고    scopus 로고
    • Bacterial small RNA regulators: Versatile roles and rapidly evolving variations
    • Gottesman S, Storz G. 2011. Bacterial small RNA regulators: versatile roles and rapidly evolving variations. Cold Spring Harb Perspect Biol. 3: a003798.
    • (2011) Cold Spring Harb Perspect Biol. , vol.3
    • Gottesman, S.1    Storz, G.2
  • 17
    • 51149124278 scopus 로고    scopus 로고
    • Cellulose modulates biofilm formation by counteracting curli-mediated colonization of solid surfaces in Escherichia coli
    • Gualdi L, et al. 2008. Cellulose modulates biofilm formation by counteracting curli-mediated colonization of solid surfaces in Escherichia coli. Microbiology 154:2017-2024.
    • (2008) Microbiology , vol.154 , pp. 2017-2024
    • Gualdi, L.1
  • 18
    • 84904362234 scopus 로고    scopus 로고
    • MicL, a new sE-dependent sRNA, combats envelope stress by repressing synthesis of Lpp, the major outer membrane lipoprotein
    • GuoMS, et al. 2014. MicL, a new sE-dependent sRNA, combats envelope stress by repressing synthesis of Lpp, the major outer membrane lipoprotein. Genes Dev. 28:1620-1634.
    • (2014) Genes Dev. , vol.28 , pp. 1620-1634
    • Guo, M.S.1
  • 19
    • 70449700233 scopus 로고    scopus 로고
    • Homologs of the small RNA SgrS are broadly distributed in enteric bacteria but have diverged in size and sequence
    • Horler RS, Vanderpool CK. 2009. Homologs of the small RNA SgrS are broadly distributed in enteric bacteria but have diverged in size and sequence. Nucleic Acids Res. 37:5465-5476.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 5465-5476
    • Horler, R.S.1    Vanderpool, C.K.2
  • 20
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID Bioinformatics Resources
    • Huang DW, Sherman BT, Lempicki RA. 2009. Systematic and integrative analysis of large gene lists using DAVID Bioinformatics Resources. Nat Protoc. 4:44-57.
    • (2009) Nat Protoc. , vol.4 , pp. 44-57
    • Huang, D.W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 21
    • 0141758085 scopus 로고    scopus 로고
    • Sigma70 promoters in Escherichia coli: Specific transcription in dense regions of overlapping promoter-like signals
    • Huerta AM, Collado-Vides J. 2003. Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals. J Mol Biol. 333:261-278.
    • (2003) J Mol Biol. , vol.333 , pp. 261-278
    • Huerta, A.M.1    Collado-Vides, J.2
  • 22
    • 33751369021 scopus 로고    scopus 로고
    • Selection for unequal densities of sigma70 promoter-like signals in different regions of large bacterial genomes
    • Huerta AM, Francino MP, Morett E, Collado-Vides J. 2006. Selection for unequal densities of sigma70 promoter-like signals in different regions of large bacterial genomes. PLoS Genet. 2:e185.
    • (2006) PLoS Genet. , vol.2 , pp. e185
    • Huerta, A.M.1    Francino, M.P.2    Morett, E.3    Collado-Vides, J.4
  • 23
    • 78649231644 scopus 로고    scopus 로고
    • Origins, evolution, and phenotypic impact of new genes
    • Kaessmann H. 2010. Origins, evolution, and phenotypic impact of new genes. Genome Res. 20:1313-1326.
    • (2010) Genome Res. , vol.20 , pp. 1313-1326
    • Kaessmann, H.1
  • 24
    • 66749083981 scopus 로고    scopus 로고
    • Signals, regulatory networks, and materials that build and break bacterial biofilms
    • Karatan E, Watnick P. 2009. Signals, regulatory networks, and materials that build and break bacterial biofilms. Microbiol Mol Biol Rev. 73: 310-347.
    • (2009) Microbiol Mol Biol Rev. , vol.73 , pp. 310-347
    • Karatan, E.1    Watnick, P.2
  • 25
    • 84876556918 scopus 로고    scopus 로고
    • EcoCyc: Fusing model organism databases with systems biology
    • Keseler IM, et al. 2013. EcoCyc: fusing model organism databases with systems biology. Nucleic Acids Res. 41:D605-D612.
    • (2013) Nucleic Acids Res. , vol.41 , pp. D605-D612
    • Keseler, I.M.1
  • 26
    • 84860742976 scopus 로고    scopus 로고
    • The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium
    • Kroger C, et al. 2012. The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium. Proc Natl Acad Sci U S A. 109:E1277-E1286.
    • (2012) Proc Natl Acad Sci U S A. , vol.109 , pp. E1277-E1286
    • Kroger, C.1
  • 27
    • 84890302568 scopus 로고    scopus 로고
    • An infection-relevant transcriptomic compendium for Salmonella enterica serovar Typhimurium
    • Kroger C, et al. 2013. An infection-relevant transcriptomic compendium for Salmonella enterica serovar Typhimurium. Cell Host Microbe. 14: 683-695.
    • (2013) Cell Host Microbe. , vol.14 , pp. 683-695
    • Kroger, C.1
  • 28
    • 77957343695 scopus 로고    scopus 로고
    • The extinction dynamics of bacterial pseudogenes
    • Kuo CH, Ochman H. 2010. The extinction dynamics of bacterial pseudogenes. PLoS Genet. 6:e1001050.
    • (2010) PLoS Genet. , vol.6
    • Kuo, C.H.1    Ochman, H.2
  • 29
    • 77952128269 scopus 로고    scopus 로고
    • An antisense RNA that governs the expression kinetics of a multifunctional virulence gene
    • Lee EJ, Groisman EA. 2010. An antisense RNA that governs the expression kinetics of a multifunctional virulence gene. Mol Microbiol. 76: 1020-1033.
    • (2010) Mol Microbiol. , vol.76 , pp. 1020-1033
    • Lee, E.J.1    Groisman, E.A.2
  • 30
    • 3142564584 scopus 로고    scopus 로고
    • The small RNA chaperone Hfq and multiple small RNAs control quorum sensing in Vibrio harveyi and Vibrio cholerae
    • Lenz DH, et al. 2004. The small RNA chaperone Hfq and multiple small RNAs control quorum sensing in Vibrio harveyi and Vibrio cholerae. Cell 118:69-82.
    • (2004) Cell , vol.118 , pp. 69-82
    • Lenz, D.H.1
  • 31
    • 21844434913 scopus 로고    scopus 로고
    • Evolutionary origins of genomic repertoires in bacteria
    • Lerat E, Daubin V, Ochman H, Moran NA. 2005. Evolutionary origins of genomic repertoires in bacteria. PLoS Biol. 3:e130.
    • (2005) PLoS Biol. , vol.3 , pp. e130
    • Lerat, E.1    Daubin, V.2    Ochman, H.3    Moran, N.A.4
  • 32
    • 55549097836 scopus 로고    scopus 로고
    • Mapping short DNA sequencing reads and calling variants using mapping quality scores
    • Li H, Ruan J, Durbin R. 2008. Mapping short DNA sequencing reads and calling variants using mapping quality scores. Genome Res. 18: 1851-1858.
    • (2008) Genome Res. , vol.18 , pp. 1851-1858
    • Li, H.1    Ruan, J.2    Durbin, R.3
  • 33
    • 0027905006 scopus 로고
    • Natural selection and the origin of jingwei, a chimeric processed functional gene in Drosophila
    • Long M, Langley CH. 1993. Natural selection and the origin of jingwei, a chimeric processed functional gene in Drosophila. Science 260:91-95.
    • (1993) Science , vol.260 , pp. 91-95
    • Long, M.1    Langley, C.H.2
  • 34
    • 77949991970 scopus 로고    scopus 로고
    • Rapid pair-wise synteny analysis of large bacterial genomes using web-based GeneOrder4.0
    • Mahadevan P, Seto D. 2010. Rapid pair-wise synteny analysis of large bacterial genomes using web-based GeneOrder4.0. BMC Res Notes. 3:41.
    • (2010) BMC Res Notes. , vol.3 , pp. 41
    • Mahadevan, P.1    Seto, D.2
  • 35
    • 70449380939 scopus 로고    scopus 로고
    • Genome-wide identification of transcription start sites, promoters and transcription factor binding sites in e
    • Mendoza-Vargas A, et al. 2009. Genome-wide identification of transcription start sites, promoters and transcription factor binding sites in E. coli. PLoS One 4:e7526.
    • (2009) Coli. PLoS One , vol.4 , pp. e7526
    • Mendoza-Vargas, A.1
  • 36
    • 0035479142 scopus 로고    scopus 로고
    • Deletional bias and the evolution of bacterial genomes
    • Mira A, Ochman H, Moran NA. 2001. Deletional bias and the evolution of bacterial genomes. Trends Genet. 17:589-596.
    • (2001) Trends Genet. , vol.17 , pp. 589-596
    • Mira, A.1    Ochman, H.2    Moran, N.A.3
  • 37
    • 84867651617 scopus 로고    scopus 로고
    • Real-time evolution of new genes by innovation, amplification, and divergence
    • Nasvall J, Sun L, Roth JR, Andersson DI. 2012. Real-time evolution of new genes by innovation, amplification, and divergence. Science 338: 384-387.
    • (2012) Science , vol.338 , pp. 384-387
    • Nasvall, J.1    Sun, L.2    Roth, J.R.3    Andersson, D.I.4
  • 39
    • 0035807385 scopus 로고    scopus 로고
    • Genome sequence of Yersinia pestis, the causative agent of plague
    • Parkhill J, et al. 2001. Genome sequence of Yersinia pestis, the causative agent of plague. Nature 413:523-527.
    • (2001) Nature , vol.413 , pp. 523-527
    • Parkhill, J.1
  • 40
    • 84902678434 scopus 로고    scopus 로고
    • Evolutionary patterns of Escherichia coli small RNAs and their regulatory interactions
    • Peer A, Margalit H. 2014. Evolutionary patterns of Escherichia coli small RNAs and their regulatory interactions. RNA 20:994-1003.
    • (2014) RNA , vol.20 , pp. 994-1003
    • Peer, A.1    Margalit, H.2
  • 41
    • 73649105812 scopus 로고    scopus 로고
    • The Citrobacter rodentium genome sequence reveals convergent evolution with human pathogenic Escherichia coli
    • Petty NK, et al. 2010. The Citrobacter rodentium genome sequence reveals convergent evolution with human pathogenic Escherichia coli. J Bacteriol. 192:525-538.
    • (2010) J Bacteriol. , vol.192 , pp. 525-538
    • Petty, N.K.1
  • 42
    • 26444600764 scopus 로고    scopus 로고
    • Small RNA genes expressed from Staphylococcus aureus genomic and pathogenicity islands with specific expression among pathogenic strains
    • Pichon C, Felden B. 2005. Small RNA genes expressed from Staphylococcus aureus genomic and pathogenicity islands with specific expression among pathogenic strains. Proc Natl Acad Sci U S A. 102:14249-14254.
    • (2005) Proc Natl Acad Sci U S A. , vol.102 , pp. 14249-14254
    • Pichon, C.1    Felden, B.2
  • 43
    • 80052526246 scopus 로고    scopus 로고
    • Genome-wide detection of novel regulatory RNAs in e coli
    • Raghavan R, Groisman EA, Ochman H. 2011. Genome-wide detection of novel regulatory RNAs in E coli. Genome Res. 21:1487-1497.
    • (2011) Genome Res. , vol.21 , pp. 1487-1497
    • Raghavan, R.1    Groisman, E.A.2    Ochman, H.3
  • 44
    • 79958106074 scopus 로고    scopus 로고
    • Genome-wide identification of transcription start sites yields a novel thermosensing RNA and new cyclic AMP receptor protein-regulated genes in Escherichia coli
    • Raghavan R, Sage A, Ochman H. 2011. Genome-wide identification of transcription start sites yields a novel thermosensing RNA and new cyclic AMP receptor protein-regulated genes in Escherichia coli. J Bacteriol. 193:2871-2874.
    • (2011) J Bacteriol. , vol.193 , pp. 2871-2874
    • Raghavan, R.1    Sage, A.2    Ochman, H.3
  • 45
    • 84865728811 scopus 로고    scopus 로고
    • Antisense transcription is pervasive but rarely conserved in enteric bacteria
    • Raghavan R, Sloan DB, Ochman H. 2012. Antisense transcription is pervasive but rarely conserved in enteric bacteria. mBio 3:e00156-12.
    • (2012) MBio , vol.3 , pp. e00156-e00212
    • Raghavan, R.1    Sloan, D.B.2    Ochman, H.3
  • 46
    • 4644309277 scopus 로고    scopus 로고
    • Order and disorder in bacterial genomes
    • Rocha EP. 2004. Order and disorder in bacterial genomes. Curr Opin Microbiol. 7:519-527.
    • (2004) Curr Opin Microbiol. , vol.7 , pp. 519-527
    • Rocha, E.P.1
  • 47
    • 0033635022 scopus 로고    scopus 로고
    • Artemis: Sequence visualization and annotation
    • Rutherford K, et al. 2000. Artemis: sequence visualization and annotation. Bioinformatics 16:944-945.
    • (2000) Bioinformatics , vol.16 , pp. 944-945
    • Rutherford, K.1
  • 48
    • 50849105413 scopus 로고    scopus 로고
    • Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq
    • Sittka A, et al. 2008. Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq. PLoS Genet. 4:e1000163.
    • (2008) PLoS Genet. , vol.4
    • Sittka, A.1
  • 49
    • 84863227681 scopus 로고    scopus 로고
    • Evolutionary dynamics of small RNAs in 27 Escherichia coli and Shigella genomes
    • Skippington E, Ragan MA. 2012. Evolutionary dynamics of small RNAs in 27 Escherichia coli and Shigella genomes. Genome Biol Evol. 4: 330-345.
    • (2012) Genome Biol Evol. , vol.4 , pp. 330-345
    • Skippington, E.1    Ragan, M.A.2
  • 50
    • 84885390505 scopus 로고    scopus 로고
    • The evolution of genomic instability in the obligate endosymbionts of whiteflies
    • Sloan DB, Moran NA. 2013. The evolution of genomic instability in the obligate endosymbionts of whiteflies. Genome Biol Evol. 5:783-793.
    • (2013) Genome Biol Evol. , vol.5 , pp. 783-793
    • Sloan, D.B.1    Moran, N.A.2
  • 51
    • 0034893582 scopus 로고    scopus 로고
    • Rapid evolution of cis-regulatory sequences via local point mutations
    • Stone JR, Wray GA. 2001. Rapid evolution of cis-regulatory sequences via local point mutations. Mol Biol Evol. 18:1764-1770.
    • (2001) Mol Biol Evol. , vol.18 , pp. 1764-1770
    • Stone, J.R.1    Wray, G.A.2
  • 52
    • 80053019485 scopus 로고    scopus 로고
    • Regulation by small RNAs in bacteria: Expanding frontiers
    • Storz G, Vogel J, Wassarman KM. 2011. Regulation by small RNAs in bacteria: expanding frontiers. Mol Cell. 43:880-891.
    • (2011) Mol Cell. , vol.43 , pp. 880-891
    • Storz, G.1    Vogel, J.2    Wassarman, K.M.3
  • 53
    • 0035058359 scopus 로고    scopus 로고
    • Evolution of prokaryotic gene order: Genome rearrangements in closely related species
    • Suyama M, Bork P. 2001. Evolution of prokaryotic gene order: genome rearrangements in closely related species. Trends Genet. 17:10-13.
    • (2001) Trends Genet. , vol.17 , pp. 10-13
    • Suyama, M.1    Bork, P.2
  • 54
    • 0037189373 scopus 로고    scopus 로고
    • 50 million years of genomic stasis in endosymbiotic bacteria
    • Tamas I, et al. 2002. 50 million years of genomic stasis in endosymbiotic bacteria. Science 296:2376-2379.
    • (2002) Science , vol.296 , pp. 2376-2379
    • Tamas, I.1
  • 55
    • 0036713509 scopus 로고    scopus 로고
    • Transcriptome analysis of Escherichia coli using highdensity oligonucleotide probe arrays
    • Tjaden B, et al. 2002. Transcriptome analysis of Escherichia coli using highdensity oligonucleotide probe arrays. Nucleic Acids Res. 30: 3732-3738.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 3732-3738
    • Tjaden, B.1
  • 56
    • 79851505378 scopus 로고    scopus 로고
    • Horizontal transfer, not duplication, drives the expansion of protein families in prokaryotes
    • Treangen TJ, Rocha EP. 2011. Horizontal transfer, not duplication, drives the expansion of protein families in prokaryotes. PLoS Genet. 7: e1001284.
    • (2011) PLoS Genet. , vol.7
    • Treangen, T.J.1    Rocha, E.P.2
  • 57
    • 84881025452 scopus 로고    scopus 로고
    • Characterisation of the stbD/E toxin-antitoxin system of pEP36, a plasmid of the plant pathogen Erwinia pyrifoliae
    • Unterholzner SJ, Hailer B, Poppenberger B, Rozhon W. 2013. Characterisation of the stbD/E toxin-antitoxin system of pEP36, a plasmid of the plant pathogen Erwinia pyrifoliae. Plasmid 70:216-225.
    • (2013) Plasmid , vol.70 , pp. 216-225
    • Unterholzner, S.J.1    Hailer, B.2    Poppenberger, B.3    Rozhon, W.4
  • 58
    • 34547631100 scopus 로고    scopus 로고
    • Nitrate sensing and metabolism modulate motility, biofilm formation, and virulence in Pseudomonas aeruginosa
    • Van Alst NE, Picardo KF, Iglewski BH, Haidaris CG. 2007. Nitrate sensing and metabolism modulate motility, biofilm formation, and virulence in Pseudomonas aeruginosa. Infect Immun. 75:3780-3790.
    • (2007) Infect Immun. , vol.75 , pp. 3780-3790
    • Van Alst, N.E.1    Picardo, K.F.2    Iglewski, B.H.3    Haidaris, C.G.4
  • 59
    • 0034625237 scopus 로고    scopus 로고
    • 6S RNA regulates E. Coli RNA polymerase activity
    • Wassarman KM, Storz G. 2000. 6S RNA regulates E. coli RNA polymerase activity. Cell 101:613-623.
    • (2000) Cell , vol.101 , pp. 613-623
    • Wassarman, K.M.1    Storz, G.2
  • 60
    • 3042840984 scopus 로고    scopus 로고
    • Identification of tandem duplicate regulatory small RNAs in Pseudomonas aeruginosa involved in iron homeostasis
    • Wilderman PJ, et al. 2004. Identification of tandem duplicate regulatory small RNAs in Pseudomonas aeruginosa involved in iron homeostasis. Proc Natl Acad Sci U S A. 101:9792-9797.
    • (2004) Proc Natl Acad Sci U S A. , vol.101 , pp. 9792-9797
    • Wilderman, P.J.1


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