메뉴 건너뛰기




Volumn 3, Issue , 2010, Pages

Rapid pair-wise synteny analysis of large bacterial genomes using web-based GeneOrder4.0

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA (MICROORGANISMS);

EID: 77949991970     PISSN: None     EISSN: 17560500     Source Type: Journal    
DOI: 10.1186/1756-0500-3-41     Document Type: Article
Times cited : (13)

References (13)
  • 2
    • 0010414313 scopus 로고    scopus 로고
    • Evolution of gene order conservation in prokaryotes
    • 10.1186/gb-2001-2-6-research0020. 11423009
    • Evolution of gene order conservation in prokaryotes. J Tamames, Genome Biol 2001 2 ESEARCH0020 10.1186/gb-2001-2-6-research0020 11423009
    • (2001) Genome Biol , vol.2
    • Tamames, J.1
  • 3
    • 0037057376 scopus 로고    scopus 로고
    • Genomic functional annotation using co-evolution profiles of gene clusters
    • 10.1186/gb-2002-3-11-research0060. 12429059
    • Genomic functional annotation using co-evolution profiles of gene clusters. Y Zheng RJ Roberts S Kasif, Genome Biol 2002 3 ESEARCH0060 10.1186/gb-2002-3-11-research0060 12429059
    • (2002) Genome Biol , vol.3
    • Zheng, Y.1    Roberts, R.J.2    Kasif, S.3
  • 4
    • 0033055062 scopus 로고    scopus 로고
    • The use of gene clusters to infer functional coupling
    • 10.1073/pnas.96.6.2896. 10077608
    • The use of gene clusters to infer functional coupling. R Overbeek M Fonstein M D'Souza GD Pusch N Maltsev, PNAS 1999 96 2896 2901 10.1073/pnas.96.6.2896 10077608
    • (1999) PNAS , vol.96 , pp. 2896-2901
    • Overbeek, R.1    Fonstein, M.2    D'Souza, M.3    Pusch, G.D.4    Maltsev, N.5
  • 5
    • 33748981457 scopus 로고    scopus 로고
    • New metrics for comparative genomics
    • 10.1016/j.copbio.2006.08.007. 16978854
    • New metrics for comparative genomics. MY Galperin E Kolker, Curr Opin Biotechnol 2006 17 440 447 10.1016/j.copbio.2006.08.007 16978854
    • (2006) Curr Opin Biotechnol , vol.17 , pp. 440-447
    • Galperin, M.Y.1    Kolker, E.2
  • 6
    • 12344269927 scopus 로고    scopus 로고
    • Interactive gene-order comparison for multiple small genomes
    • 10.1093/bioinformatics/bth406. 15256414
    • Interactive gene-order comparison for multiple small genomes. A Kaluszka C Gibas, Bioinformatics 2004 20 3662 3664 10.1093/bioinformatics/bth406 15256414
    • (2004) Bioinformatics , vol.20 , pp. 3662-3664
    • Kaluszka, A.1    Gibas, C.2
  • 7
    • 0035098916 scopus 로고    scopus 로고
    • GeneOrder: Comparing the order of genes in small genomes
    • 10.1093/bioinformatics/17.2.162. 11238072
    • GeneOrder: comparing the order of genes in small genomes. R Mazumder A Kolaskar D Seto, Bioinformatics 2001 17 162 166 10.1093/bioinformatics/17.2.162 11238072
    • (2001) Bioinformatics , vol.17 , pp. 162-166
    • Mazumder, R.1    Kolaskar, A.2    Seto, D.3
  • 8
    • 2942605977 scopus 로고    scopus 로고
    • GeneOrder3.0: Software for comparing the order of genes in pairs of small bacterial genomes
    • 10.1186/1471-2105-5-52. 15128433
    • GeneOrder3.0: software for comparing the order of genes in pairs of small bacterial genomes. S Celamkoti S Kundeti A Purkayastha R Mazumder C Buck D Seto, BMC Bioinformatics 2004 5 52 10.1186/1471-2105-5-52 15128433
    • (2004) BMC Bioinformatics , vol.5 , pp. 52
    • Celamkoti, S.1    Kundeti, S.2    Purkayastha, A.3    Mazumder, R.4    Buck, C.5    Seto, D.6
  • 9
    • 49149115195 scopus 로고    scopus 로고
    • Unifying classical and molecular taxonomic classification: Analysis of the Podoviridae using BLASTP-based tools
    • 10.1016/j.resmic.2008.03.005. 18555669
    • Unifying classical and molecular taxonomic classification: analysis of the Podoviridae using BLASTP-based tools. R Lavigne D Seto P Mahadevan H-W Ackermann AM Kropinski, Research in Microbiology 2008 159 406 414 10.1016/j.resmic.2008.03.005 18555669
    • (2008) Research in Microbiology , vol.159 , pp. 406-414
    • Lavigne, R.1    Seto, D.2    Mahadevan, P.3    Ackermann, H.-W.4    Kropinski, A.M.5
  • 11
    • 0036226603 scopus 로고    scopus 로고
    • BLAT - The BLAST-like alignment tool
    • 11932250
    • BLAT - the BLAST-like alignment tool. WJ Kent, Genome Res 2002 12 656 664 11932250
    • (2002) Genome Res , vol.12 , pp. 656-664
    • Kent, W.J.1
  • 13
    • 13444305296 scopus 로고    scopus 로고
    • The ProDom database of protein domain families: More emphasis on 3D
    • 10.1093/nar/gki034. 15608179
    • The ProDom database of protein domain families: more emphasis on 3D. C Bru E Courcelle S Carrere Y Beausse S Dalmar D Kahn, Nucleic Acids Res 2005 33 212 215 10.1093/nar/gki034 15608179
    • (2005) Nucleic Acids Res , vol.33 , pp. 4212-215
    • Bru, C.1    Courcelle, E.2    Carrere, S.3    Beausse, Y.4    Dalmar, S.5    Kahn, D.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.