-
1
-
-
15744386581
-
WHO estimates of the causes of death in children
-
Bryce, J., Boschi-Pinto, C., Shibuya, K., Black, R. E., and WHO Child Health Epidemiology Reference Group. (2005) WHO estimates of the causes of death in children. Lancet 365, 1147-1152
-
(2005)
Lancet
, vol.365
, pp. 1147-1152
-
-
Bryce, J.1
Boschi-Pinto, C.2
Shibuya, K.3
Black, R.E.4
-
2
-
-
84883380419
-
Global causes of diarrheal disease mortality in children 5 years of age: A systematic review
-
Lanata, C. F., Fischer-Walker, C. L., Olascoaga, A. C., Torres, C. X., Aryee, M. J., Black, R. E., Child Health Epidemiology Reference Group of the World Health Organization, and UNICEF (2013) Global causes of diarrheal disease mortality in children 5 years of age: a systematic review. PloS one 8, e72788
-
(2013)
PloS One
, vol.8
, pp. e72788
-
-
Lanata, C.F.1
Fischer-Walker, C.L.2
Olascoaga, A.C.3
Torres, C.X.4
Aryee, M.J.5
Black, R.E.6
-
3
-
-
0025047435
-
A genetic locus of enteropathogenic Escherichia coli necessary for the production of attaching and effacing lesions on tissue culture cells
-
Jerse, A. E., Yu, J., Tall, B. D., and Kaper, J. B. (1990) A genetic locus of enteropathogenic Escherichia coli necessary for the production of attaching and effacing lesions on tissue culture cells. Proc. Natl. Acad. Sci. U.S.A. 87, 7839-7843
-
(1990)
Proc. Natl. Acad. Sci. U.S.A.
, vol.87
, pp. 7839-7843
-
-
Jerse, A.E.1
Yu, J.2
Tall, B.D.3
Kaper, J.B.4
-
4
-
-
0020508377
-
Attaching and effacing activities of rabbit and human enteropathogenic Escherichia coli in pig and rabbit intestines
-
Moon, H. W., Whipp, S. C., Argenzio, R. A., Levine, M. M., and Giannella, R. A. (1983) Attaching and effacing activities of rabbit and human enteropathogenic Escherichia coli in pig and rabbit intestines. Infect. Immun. 41, 1340-1351
-
(1983)
Infect. Immun.
, vol.41
, pp. 1340-1351
-
-
Moon, H.W.1
Whipp, S.C.2
Argenzio, R.A.3
Levine, M.M.4
Giannella, R.A.5
-
5
-
-
0029933731
-
A pathogenic bacterium triggers epithelial signals to form a functional bacterial receptor that mediates actin pseudopod formation
-
Rosenshine, I., Ruschkowski, S., Stein, M., Reinscheid, D. J., Mills, S. D., and Finlay, B. B. (1996) A pathogenic bacterium triggers epithelial signals to form a functional bacterial receptor that mediates actin pseudopod formation. EMBO J. 15, 2613-2624
-
(1996)
EMBO J.
, vol.15
, pp. 2613-2624
-
-
Rosenshine, I.1
Ruschkowski, S.2
Stein, M.3
Reinscheid, D.J.4
Mills, S.D.5
Finlay, B.B.6
-
6
-
-
0022910928
-
Ultrastructural and biochemical changes in human jejunal mucosa associated with enteropathogenic Escherichia coli (0111) infection
-
Taylor, C. J., Hart, A., Batt, R. M., McDougall, C., and McLean, L. (1986) Ultrastructural and biochemical changes in human jejunal mucosa associated with enteropathogenic Escherichia coli (0111) infection. J. Pediatr. Gastroenterol. Nutr. 5, 70-73
-
(1986)
J. Pediatr. Gastroenterol. Nutr.
, vol.5
, pp. 70-73
-
-
Taylor, C.J.1
Hart, A.2
Batt, R.M.3
McDougall, C.4
McLean, L.5
-
7
-
-
79958804398
-
Enteropathogenic and enterohaemorrhagic Escherichia coli: Even more subversive elements
-
Wong, A. R., Pearson, J. S., Bright, M. D., Munera, D., Robinson, K. S., Lee, S. F., Frankel, G., and Hartland, E. L. (2011) Enteropathogenic and enterohaemorrhagic Escherichia coli: even more subversive elements. Mol. Microbiol. 80, 1420-1438
-
(2011)
Mol. Microbiol.
, vol.80
, pp. 1420-1438
-
-
Wong, A.R.1
Pearson, J.S.2
Bright, M.D.3
Munera, D.4
Robinson, K.S.5
Lee, S.F.6
Frankel, G.7
Hartland, E.L.8
-
8
-
-
79952262440
-
Three-dimensional model of Salmonella's needle complex at subnanometer resolution
-
Schraidt, O., and Marlovits, T. C. (2011) Three-dimensional model of Salmonella's needle complex at subnanometer resolution. Science 331, 1192-1195
-
(2011)
Science
, vol.331
, pp. 1192-1195
-
-
Schraidt, O.1
Marlovits, T.C.2
-
9
-
-
66149092022
-
A conserved structural motif mediates formation of the periplasmic rings in the type III secretion system
-
Spreter, T., Yip, C. K., Sanowar, S., André, I., Kimbrough, T. G., Vuckovic, M., Pfuetzner, R. A., Deng, W., Yu, A. C., Finlay, B. B., Baker, D., Miller, S. I., and Strynadka, N. C. (2009) A conserved structural motif mediates formation of the periplasmic rings in the type III secretion system. Nat. Struct. Mol. Biol. 16, 468-476
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 468-476
-
-
Spreter, T.1
Yip, C.K.2
Sanowar, S.3
André, I.4
Kimbrough, T.G.5
Vuckovic, M.6
Pfuetzner, R.A.7
Deng, W.8
Yu, A.C.9
Finlay, B.B.10
Baker, D.11
Miller, S.I.12
Strynadka, N.C.13
-
10
-
-
20444488138
-
Structural characterization of the molecular platform for type III secretion system assembly
-
Yip, C. K., Kimbrough, T. G., Felise, H. B., Vuckovic, M., Thomas, N. A., Pfuetzner, R. A., Frey, E. A., Finlay, B. B., Miller, S. I., and Strynadka, N. C. (2005) Structural characterization of the molecular platform for type III secretion system assembly. Nature 435, 702-707
-
(2005)
Nature
, vol.435
, pp. 702-707
-
-
Yip, C.K.1
Kimbrough, T.G.2
Felise, H.B.3
Vuckovic, M.4
Thomas, N.A.5
Pfuetzner, R.A.6
Frey, E.A.7
Finlay, B.B.8
Miller, S.I.9
Strynadka, N.C.10
-
11
-
-
18944390249
-
Bioinformatics analysis of the locus for enterocyte effacement provides novel insights into type-III secretion
-
Pallen, M. J., Beatson, S. A., and Bailey, C. M. (2005) Bioinformatics analysis of the locus for enterocyte effacement provides novel insights into type-III secretion. BMC Microbiol. 5, 9
-
(2005)
BMC Microbiol.
, vol.5
, pp. 9
-
-
Pallen, M.J.1
Beatson, S.A.2
Bailey, C.M.3
-
12
-
-
84856247471
-
EscI: A crucial component of the type III secretion system forms the inner rod structure in enteropathogenic Escherichia coli
-
Sal-Man, N., Deng, W., and Finlay, B. B. (2012) EscI: a crucial component of the type III secretion system forms the inner rod structure in enteropathogenic Escherichia coli. Biochem. J. 442, 119-125
-
(2012)
Biochem. J.
, vol.442
, pp. 119-125
-
-
Sal-Man, N.1
Deng, W.2
Finlay, B.B.3
-
13
-
-
0035206531
-
The filamentous type III secretion translocon of enteropathogenic Escherichia coli
-
Daniell, S. J., Takahashi, N., Wilson, R., Friedberg, D., Rosenshine, I., Booy, F. P., Shaw, R. K., Knutton, S., Frankel, G., and Aizawa, S. (2001) The filamentous type III secretion translocon of enteropathogenic Escherichia coli. Cell. Microbiol. 3, 865-871
-
(2001)
Cell. Microbiol.
, vol.3
, pp. 865-871
-
-
Daniell, S.J.1
Takahashi, N.2
Wilson, R.3
Friedberg, D.4
Rosenshine, I.5
Booy, F.P.6
Shaw, R.K.7
Knutton, S.8
Frankel, G.9
Aizawa, S.10
-
14
-
-
0032522344
-
A novel EspA-associated surface organelle of enteropathogenic Escherichia coli involved in protein translocation into epithelial cells
-
Knutton, S., Rosenshine, I., Pallen, M. J., Nisan, I., Neves, B. C., Bain, C., Wolff, C., Dougan, G., and Frankel, G. (1998) A novel EspA-associated surface organelle of enteropathogenic Escherichia coli involved in protein translocation into epithelial cells. EMBO J. 17, 2166-2176
-
(1998)
EMBO J.
, vol.17
, pp. 2166-2176
-
-
Knutton, S.1
Rosenshine, I.2
Pallen, M.J.3
Nisan, I.4
Neves, B.C.5
Bain, C.6
Wolff, C.7
Dougan, G.8
Frankel, G.9
-
15
-
-
0035949491
-
Supermolecular structure of the enteropathogenic Escherichia coli type III secretion system and its direct interaction with the EspA-sheath-like structure
-
Sekiya, K., Ohishi, M., Ogino, T., Tamano, K., Sasakawa, C., and Abe, A. (2001) Supermolecular structure of the enteropathogenic Escherichia coli type III secretion system and its direct interaction with the EspA-sheath-like structure. Proc. Natl. Acad. Sci. U.S.A. 98, 11638-11643
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 11638-11643
-
-
Sekiya, K.1
Ohishi, M.2
Ogino, T.3
Tamano, K.4
Sasakawa, C.5
Abe, A.6
-
16
-
-
33745860367
-
Structural polymorphism in bacterial EspA filaments revealed by cryo-EM and an improved approach to helical reconstruction
-
Wang, Y. A., Yu, X., Yip, C., Strynadka, N. C., and Egelman, E. H. (2006) Structural polymorphism in bacterial EspA filaments revealed by cryo-EM and an improved approach to helical reconstruction. Structure 14, 1189-1196
-
(2006)
Structure
, vol.14
, pp. 1189-1196
-
-
Wang, Y.A.1
Yu, X.2
Yip, C.3
Strynadka, N.C.4
Egelman, E.H.5
-
17
-
-
11444263137
-
Structural characterization of a type III secretion system filament protein in complex with its chaperone
-
Yip, C. K., Finlay, B. B., and Strynadka, N. C. (2005) Structural characterization of a type III secretion system filament protein in complex with its chaperone. Nat. Struct. Mol. Biol. 12, 75-81
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, pp. 75-81
-
-
Yip, C.K.1
Finlay, B.B.2
Strynadka, N.C.3
-
18
-
-
0034775390
-
Characterization of translocation pores inserted into plasma membranes by type III-secreted Esp proteins of enteropathogenic Escherichia coli
-
Ide, T., Laarmann, S., Greune, L., Schillers, H., Oberleithner, H., and Schmidt, M. A. (2001) Characterization of translocation pores inserted into plasma membranes by type III-secreted Esp proteins of enteropathogenic Escherichia coli. Cell. Microbiol. 3, 669-679
-
(2001)
Cell. Microbiol.
, vol.3
, pp. 669-679
-
-
Ide, T.1
Laarmann, S.2
Greune, L.3
Schillers, H.4
Oberleithner, H.5
Schmidt, M.A.6
-
19
-
-
0029842085
-
Peptidoglycan as a barrier to transenvelope transport
-
Dijkstra, A. J., and Keck, W. (1996) Peptidoglycan as a barrier to transenvelope transport. J. Bacteriol. 178, 5555-5562
-
(1996)
J. Bacteriol.
, vol.178
, pp. 5555-5562
-
-
Dijkstra, A.J.1
Keck, W.2
-
20
-
-
0344393521
-
Lytic transglycosylases in macromolecular transport systems of Gram-negative bacteria
-
Koraimann, G. (2003) Lytic transglycosylases in macromolecular transport systems of Gram-negative bacteria. Cell Mol. Life Sci. 60, 2371-2388
-
(2003)
Cell Mol. Life Sci.
, vol.60
, pp. 2371-2388
-
-
Koraimann, G.1
-
21
-
-
39649099979
-
Lytic transglycosylases: Bacterial space-making autolysins
-
Scheurwater, E., Reid, C. W., and Clarke, A. J. (2008) Lytic transglycosylases: bacterial space-making autolysins. Int. J. Biochem. Cell Biol. 40, 586-591
-
(2008)
Int. J. Biochem. Cell Biol.
, vol.40
, pp. 586-591
-
-
Scheurwater, E.1
Reid, C.W.2
Clarke, A.J.3
-
22
-
-
79953657115
-
Maintaining network security: How macromolecular structures cross the peptidoglycan layer
-
Scheurwater, E. M., and Burrows, L. L. (2011) Maintaining network security: how macromolecular structures cross the peptidoglycan layer. FEMS Microbiol. Lett. 318, 1-9
-
(2011)
FEMS Microbiol. Lett.
, vol.318
, pp. 1-9
-
-
Scheurwater, E.M.1
Burrows, L.L.2
-
23
-
-
0030047151
-
The permeability of the wall fabric of Escherichia coli and Bacillus subtilis
-
Demchick, P., and Koch, A. L. (1996) The permeability of the wall fabric of Escherichia coli and Bacillus subtilis. J. Bacteriol. 178, 768-773
-
(1996)
J. Bacteriol.
, vol.178
, pp. 768-773
-
-
Demchick, P.1
Koch, A.L.2
-
24
-
-
33645240931
-
Three-dimensional structure of the bacterial cell wall peptidoglycan
-
Meroueh, S. O., Bencze, K. Z., Hesek, D., Lee, M., Fisher, J. F., Stemmler, T. L., and Mobashery, S. (2006) Three-dimensional structure of the bacterial cell wall peptidoglycan. Proc. Natl. Acad. Sci. U.S.A. 103, 4404-4409
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 4404-4409
-
-
Meroueh, S.O.1
Bencze, K.Z.2
Hesek, D.3
Lee, M.4
Fisher, J.F.5
Stemmler, T.L.6
Mobashery, S.7
-
25
-
-
18944367563
-
Recycling of the anhydro-N-acetylmuramic acid derived from cell wall murein involves a two-step conversion to N-acetylglucosamine-phosphate
-
Uehara, T., Suefuji, K., Valbuena, N., Meehan, B., Donegan, M., and Park, J. T. (2005) Recycling of the anhydro-N-acetylmuramic acid derived from cell wall murein involves a two-step conversion to N-acetylglucosamine-phosphate. J. Bacteriol. 187, 3643-3649
-
(2005)
J. Bacteriol.
, vol.187
, pp. 3643-3649
-
-
Uehara, T.1
Suefuji, K.2
Valbuena, N.3
Meehan, B.4
Donegan, M.5
Park, J.T.6
-
26
-
-
79953670211
-
The muramidase EtgA from enteropathogenic Escherichia coli is required for efficient type III secretion
-
García-Gómez, E., Espinosa, N., de la Mora, J., Dreyfus, G., and González-Pedrajo, B. (2011) The muramidase EtgA from enteropathogenic Escherichia coli is required for efficient type III secretion. Microbiology 157, 1145-1160
-
(2011)
Microbiology
, vol.157
, pp. 1145-1160
-
-
García-Gómez, E.1
Espinosa, N.2
De La Mora, J.3
Dreyfus, G.4
González-Pedrajo, B.5
-
27
-
-
0041923944
-
Yeast two-hybrid system survey of interactions between LEE-encoded proteins of enteropathogenic Escherichia coli
-
Creasey, E. A., Delahay, R. M., Daniell, S. J., and Frankel, G. (2003) Yeast two-hybrid system survey of interactions between LEE-encoded proteins of enteropathogenic Escherichia coli. Microbiology 149, 2093-2106
-
(2003)
Microbiology
, vol.149
, pp. 2093-2106
-
-
Creasey, E.A.1
Delahay, R.M.2
Daniell, S.J.3
Frankel, G.4
-
28
-
-
27744448526
-
Peptidoglycan degradation by specialized lytic transglycosylases associated with type III and type IV secretion systems
-
Zahrl, D., Wagner, M., Bischof, K., Bayer, M., Zavecz, B., Beranek, A., Ruckenstuhl, C., Zarfel, G. E., and Koraimann, G. (2005) Peptidoglycan degradation by specialized lytic transglycosylases associated with type III and type IV secretion systems. Microbiology 151, 3455-3467
-
(2005)
Microbiology
, vol.151
, pp. 3455-3467
-
-
Zahrl, D.1
Wagner, M.2
Bischof, K.3
Bayer, M.4
Zavecz, B.5
Beranek, A.6
Ruckenstuhl, C.7
Zarfel, G.E.8
Koraimann, G.9
-
29
-
-
12144289554
-
Dissecting virulence: Systematic and functional analyses of a pathogenicity island
-
Deng, W., Puente, J. L., Gruenheid, S., Li, Y., Vallance, B. A., Vázquez, A., Barba, J., Ibarra, J. A., O'Donnell, P., Metalnikov, P., Ashman, K., Lee, S., Goode, D., Pawson, T., and Finlay, B. B. (2004) Dissecting virulence: systematic and functional analyses of a pathogenicity island. Proc. Natl. Acad. Sci. U.S.A. 101, 3597-3602
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, pp. 3597-3602
-
-
Deng, W.1
Puente, J.L.2
Gruenheid, S.3
Li, Y.4
Vallance, B.A.5
Vázquez, A.6
Barba, J.7
Ibarra, J.A.8
O'Donnell, P.9
Metalnikov, P.10
Ashman, K.11
Lee, S.12
Goode, D.13
Pawson, T.14
Finlay, B.B.15
-
30
-
-
0027155163
-
Characterization of the Shigella flexneri ipgD and ipgF genes, which are located in the proximal part of the mxi locus
-
Allaoui, A., Ménard, R., Sansonetti, P. J., and Parsot, C. (1993) Characterization of the Shigella flexneri ipgD and ipgF genes, which are located in the proximal part of the mxi locus. Infect. Immun. 61, 1707-1714
-
(1993)
Infect. Immun.
, vol.61
, pp. 1707-1714
-
-
Allaoui, A.1
Ménard, R.2
Sansonetti, P.J.3
Parsot, C.4
-
31
-
-
39149144016
-
Bacterial peptidoglycan (murein) hydrolases
-
Vollmer, W., Joris, B., Charlier, P., and Foster, S. (2008) Bacterial peptidoglycan (murein) hydrolases. FEMS Microbiol. Rev. 32, 259-286
-
(2008)
FEMS Microbiol. Rev.
, vol.32
, pp. 259-286
-
-
Vollmer, W.1
Joris, B.2
Charlier, P.3
Foster, S.4
-
32
-
-
0028091202
-
Doughnut-shaped structure of a bacterial muramidase revealed by x-ray crystallography
-
Thunnissen, A. M., Dijkstra, A. J., Kalk, K. H., Rozeboom, H. J., Engel, H., Keck, W., and Dijkstra, B. W. (1994) Doughnut-shaped structure of a bacterial muramidase revealed by x-ray crystallography. Nature 367, 750-753
-
(1994)
Nature
, vol.367
, pp. 750-753
-
-
Thunnissen, A.M.1
Dijkstra, A.J.2
Kalk, K.H.3
Rozeboom, H.J.4
Engel, H.5
Keck, W.6
Dijkstra, B.W.7
-
33
-
-
0028874610
-
Structure of the 70-kDa soluble lytic transglycosylase complexed with bulgecin A: Implications for the enzymatic mechanism
-
Thunnissen, A. M., Rozeboom, H. J., Kalk, K. H., and Dijkstra, B. W. (1995) Structure of the 70-kDa soluble lytic transglycosylase complexed with bulgecin A: implications for the enzymatic mechanism. Biochemistry 34, 12729-12737
-
(1995)
Biochemistry
, vol.34
, pp. 12729-12737
-
-
Thunnissen, A.M.1
Rozeboom, H.J.2
Kalk, K.H.3
Dijkstra, B.W.4
-
34
-
-
0033609769
-
High resolution crystal structures of the Escherichia coli lytic transglycosylase Slt70 and its complex with a peptidoglycan fragment
-
van Asselt, E. J., Thunnissen, A. M., and Dijkstra, B. W. (1999) High resolution crystal structures of the Escherichia coli lytic transglycosylase Slt70 and its complex with a peptidoglycan fragment. J. Mol. Biol. 291, 877-898
-
(1999)
J. Mol. Biol.
, vol.291
, pp. 877-898
-
-
Van Asselt, E.J.1
Thunnissen, A.M.2
Dijkstra, B.W.3
-
35
-
-
77953946505
-
A putative lytic transglycosylase tightly regulated and critical for the EHEC type three secretion
-
Yu, Y. C., Lin, C. N., Wang, S. H., Ng, S. C., Hu, W. S., and Syu, W. J. (2010) A putative lytic transglycosylase tightly regulated and critical for the EHEC type three secretion. J. Biomed. Sci. 17, 52
-
(2010)
J. Biomed. Sci.
, vol.17
, pp. 52
-
-
Yu, Y.C.1
Lin, C.N.2
Wang, S.H.3
Ng, S.C.4
Hu, W.S.5
Syu, W.J.6
-
36
-
-
27744568778
-
The putative lytic transglycosylase VirB1 from Brucella suis interacts with the type IV secretion system core components VirB8, VirB9 and VirB11
-
Höppner, C., Carle, A., Sivanesan, D., Hoeppner, S., and Baron, C. (2005) The putative lytic transglycosylase VirB1 from Brucella suis interacts with the type IV secretion system core components VirB8, VirB9 and VirB11. Microbiology 151, 3469-3482
-
(2005)
Microbiology
, vol.151
, pp. 3469-3482
-
-
Höppner, C.1
Carle, A.2
Sivanesan, D.3
Hoeppner, S.4
Baron, C.5
-
37
-
-
0035860359
-
The role in flagellar rod assembly of the N-terminal domain of Salmonella FlgJ, a flagellum-specific muramidase
-
Hirano, T., Minamino, T., and Macnab, R. M. (2001) The role in flagellar rod assembly of the N-terminal domain of Salmonella FlgJ, a flagellum-specific muramidase. J. Mol. Biol. 312, 359-369
-
(2001)
J. Mol. Biol.
, vol.312
, pp. 359-369
-
-
Hirano, T.1
Minamino, T.2
Macnab, R.M.3
-
38
-
-
0033053893
-
Peptidoglycan-hydrolyzing activity of the FlgJ protein, essential for flagellar rod formation in Salmonella typhimurium
-
Nambu, T., Minamino, T., Macnab, R. M., and Kutsukake, K. (1999) Peptidoglycan-hydrolyzing activity of the FlgJ protein, essential for flagellar rod formation in Salmonella typhimurium. J. Bacteriol. 181, 1555-1561
-
(1999)
J. Bacteriol.
, vol.181
, pp. 1555-1561
-
-
Nambu, T.1
Minamino, T.2
Macnab, R.M.3
Kutsukake, K.4
-
39
-
-
0037154093
-
Characterization of soluble and membrane-bound family 3 lytic transglycosylases from Pseudomonas aeruginosa
-
Blackburn, N. T., and Clarke, A. J. (2002) Characterization of soluble and membrane-bound family 3 lytic transglycosylases from Pseudomonas aeruginosa. Biochemistry 41, 1001-1013
-
(2002)
Biochemistry
, vol.41
, pp. 1001-1013
-
-
Blackburn, N.T.1
Clarke, A.J.2
-
40
-
-
33947620478
-
Targeting bacterial secretion systems: Benefits of disarmament in the microcosm
-
Baron, C., and Coombes, B. (2007) Targeting bacterial secretion systems: benefits of disarmament in the microcosm. Infect. Disord. Drug Targets 7, 19-27
-
(2007)
Infect. Disord. Drug Targets
, vol.7
, pp. 19-27
-
-
Baron, C.1
Coombes, B.2
-
41
-
-
36749034218
-
In situ proteolysis for protein crystallization and structure determination
-
Dong, A., Xu, X., Edwards, A. M., Chang, C., Chruszcz, M., Cuff, M., Cymborowski, M., Di Leo, R., Egorova, O., Evdokimova, E., Filippova, E., Gu, J., Guthrie, J., Ignatchenko, A., Joachimiak, A., Klostermann, N., Kim, Y., Korniyenko, Y., Minor, W., Que, Q., Savchenko, A., Skarina, T., Tan, K., Yakunin, A., Yee, A., Yim, V., Zhang, R., Zheng, H., Akutsu, M., Arrowsmith, C., Avvakumov, G. V., Bochkarev, A., Dahlgren, L. G., Dhe-Paganon, S., Dimov, S., Dombrovski, L., Finerty, P., Jr., Flodin, S., Flores, A., Gräslund, S., Hammerström, M., Herman, M. D., Hong, B. S., Hui, R., Johansson, I., Liu, Y., Nilsson, M., Nedyalkova, L., Nordlund, P., Nyman, T., Min, J., Ouyang, H., Park, H. W., Qi, C., Rabeh, W., Shen, L., Shen, Y., Sukumard, D., Tempel, W., Tong, Y., Tresagues, L., Vedadi, M., Walker, J. R., Weigelt, J., Welin, M., Wu, H., Xiao, T., Zeng, H., and Zhu, H., Midwest Center for Structural Genomics, and Structural Genomics Consortium (2007) In situ proteolysis for protein crystallization and structure determination. Nat. Methods 4, 1019-1021
-
(2007)
Nat. Methods
, vol.4
, pp. 1019-1021
-
-
Dong, A.1
Xu, X.2
Edwards, A.M.3
Chang, C.4
Chruszcz, M.5
Cuff, M.6
Cymborowski, M.7
Di Leo, R.8
Egorova, O.9
Evdokimova, E.10
Filippova, E.11
Gu, J.12
Guthrie, J.13
Ignatchenko, A.14
Joachimiak, A.15
Klostermann, N.16
Kim, Y.17
Korniyenko, Y.18
Minor, W.19
Que, Q.20
Savchenko, A.21
Skarina, T.22
Tan, K.23
Yakunin, A.24
Yee, A.25
Yim, V.26
Zhang, R.27
Zheng, H.28
Akutsu, M.29
Arrowsmith, C.30
Avvakumov, G.V.31
Bochkarev, A.32
Dahlgren, L.G.33
Dhe-Paganon, S.34
Dimov, S.35
Dombrovski, L.36
Finerty, P.37
Flodin, S.38
Flores, A.39
Gräslund, S.40
Hammerström, M.41
Herman, M.D.42
Hong, B.S.43
Hui, R.44
Johansson, I.45
Liu, Y.46
Nilsson, M.47
Nedyalkova, L.48
Nordlund, P.49
Nyman, T.50
Min, J.51
Ouyang, H.52
Park, H.W.53
Qi, C.54
Rabeh, W.55
Shen, L.56
Shen, Y.57
Sukumard, D.58
Tempel, W.59
Tong, Y.60
Tresagues, L.61
Vedadi, M.62
Walker, J.R.63
Weigelt, J.64
Welin, M.65
Wu, H.66
Xiao, T.67
Zeng, H.68
Zhu, H.69
Midwest Center for Structural Genomics70
Structural Genomics Consortium71
more..
-
42
-
-
84879385015
-
Decision making in xia2
-
Winter, G., Lobley, C. M., and Prince, S. M. (2013) Decision making in xia2. Acta Crystallogr. D Biol. Crystallogr. 69, 1260-1273
-
(2013)
Acta Crystallogr. D Biol. Crystallogr.
, vol.69
, pp. 1260-1273
-
-
Winter, G.1
Lobley, C.M.2
Prince, S.M.3
-
43
-
-
36549027357
-
Automated structure solution with autoSHARP
-
Vonrhein, C., Blanc, E., Roversi, P., and Bricogne, G. (2007) Automated structure solution with autoSHARP. Methods Mol. Biol. 364, 215-230
-
(2007)
Methods Mol. Biol.
, vol.364
, pp. 215-230
-
-
Vonrhein, C.1
Blanc, E.2
Roversi, P.3
Bricogne, G.4
-
44
-
-
84922361077
-
The PDB-REDO server for macromolecular structure model optimization
-
Joosten, R. P., Long, F., Murshudov, G. N., and Perrakis, A. (2014) The PDB-REDO server for macromolecular structure model optimization. IUCrJ 1, 213-220
-
(2014)
IUCrJ
, vol.1
, pp. 213-220
-
-
Joosten, R.P.1
Long, F.2
Murshudov, G.N.3
Perrakis, A.4
-
45
-
-
77949535720
-
Features and development of Coot
-
Emsley, P., Lohkamp, B., Scott, W. G., and Cowtan, K. (2010) Features and development of Coot. Acta Crystallogr. D Biol. Crystallogr. 66, 486-501
-
(2010)
Acta Crystallogr. D Biol. Crystallogr.
, vol.66
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
-
46
-
-
79953737180
-
Overview of the CCP4 suite and current developments
-
Winn, M. D., Ballard, C. C., Cowtan, K. D., Dodson, E. J., Emsley, P., Evans, P. R., Keegan, R. M., Krissinel, E. B., Leslie, A. G., McCoy, A., McNicholas, S. J., Murshudov, G. N., Pannu, N. S., Potterton, E. A., Powell, H. R., Read, R. J., Vagin, A., and Wilson, K. S. (2011) Overview of the CCP4 suite and current developments. Acta Crystallogr. D Biol. Crystallogr. 67, 235-242
-
(2011)
Acta Crystallogr. D Biol. Crystallogr.
, vol.67
, pp. 235-242
-
-
Winn, M.D.1
Ballard, C.C.2
Cowtan, K.D.3
Dodson, E.J.4
Emsley, P.5
Evans, P.R.6
Keegan, R.M.7
Krissinel, E.B.8
Leslie, A.G.9
McCoy, A.10
McNicholas, S.J.11
Murshudov, G.N.12
Pannu, N.S.13
Potterton, E.A.14
Powell, H.R.15
Read, R.J.16
Vagin, A.17
Wilson, K.S.18
-
47
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
Murshudov, G. N., Vagin, A. A., and Dodson, E. J. (1997) Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr. D Biol. Crystallogr. 53, 240-255
-
(1997)
Acta Crystallogr. D Biol. Crystallogr.
, vol.53
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
48
-
-
4444221565
-
UCSF Chimera-a visualization system for exploratory research and analysis
-
Pettersen, E. F., Goddard, T. D., Huang, C. C., Couch, G. S., Greenblatt, D. M., Meng, E. C., and Ferrin, T. E. (2004) UCSF Chimera-a visualization system for exploratory research and analysis. J. Comput. Chem. 25, 1605-1612
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
Meng, E.C.6
Ferrin, T.E.7
-
49
-
-
0026411101
-
Construction of an eae deletion mutant of enteropathogenic Escherichia coli by using a positive-selection suicide vector
-
Donnenberg, M. S., and Kaper, J. B. (1991) Construction of an eae deletion mutant of enteropathogenic Escherichia coli by using a positive-selection suicide vector. Infect. Immun. 59, 4310-4317
-
(1991)
Infect. Immun.
, vol.59
, pp. 4310-4317
-
-
Donnenberg, M.S.1
Kaper, J.B.2
-
50
-
-
33750470057
-
Chemical screening methods to identify ligands that promote protein stability, protein crystallization, and structure determination
-
Vedadi, M., Niesen, F. H., Allali-Hassani, A., Fedorov, O. Y., Finerty, P. J., Jr., Wasney, G. A., Yeung, R., Arrowsmith, C., Ball, L. J., Berglund, H., Hui, R., Marsden, B. D., Nordlund, P., Sundstrom, M., Weigelt, J., and Edwards, A. M. (2006) Chemical screening methods to identify ligands that promote protein stability, protein crystallization, and structure determination. Proc. Natl. Acad. Sci. U.S.A. 103, 15835-15840
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 15835-15840
-
-
Vedadi, M.1
Niesen, F.H.2
Allali-Hassani, A.3
Fedorov, O.Y.4
Finerty, P.J.5
Wasney, G.A.6
Yeung, R.7
Arrowsmith, C.8
Ball, L.J.9
Berglund, H.10
Hui, R.11
Marsden, B.D.12
Nordlund, P.13
Sundstrom, M.14
Weigelt, J.15
Edwards, A.M.16
-
51
-
-
0025778735
-
Lysozyme revisited: Crystallographic evidence for distortion of an N-acetylmuramic acid residue bound in site D
-
Strynadka, N. C., and James, M. N. (1991) Lysozyme revisited: crystallographic evidence for distortion of an N-acetylmuramic acid residue bound in site D. J. Mol. Biol. 220, 401-424
-
(1991)
J. Mol. Biol.
, vol.220
, pp. 401-424
-
-
Strynadka, N.C.1
James, M.N.2
-
52
-
-
0035939953
-
Catalysis by hen egg-white lysozyme proceeds via a covalent intermediate
-
Vocadlo, D. J., Davies, G. J., Laine, R., and Withers, S. G. (2001) Catalysis by hen egg-white lysozyme proceeds via a covalent intermediate. Nature 412, 835-838
-
(2001)
Nature
, vol.412
, pp. 835-838
-
-
Vocadlo, D.J.1
Davies, G.J.2
Laine, R.3
Withers, S.G.4
-
53
-
-
84866928806
-
The non-flagellar type III secretion system evolved from the bacterial flagellum and diversified into host-cell adapted systems
-
Abby, S. S., and Rocha, E. P. (2012) The non-flagellar type III secretion system evolved from the bacterial flagellum and diversified into host-cell adapted systems. PLoS Genet. 8, e1002983
-
(2012)
PLoS Genet.
, vol.8
, pp. e1002983
-
-
Abby, S.S.1
Rocha, E.P.2
-
54
-
-
61649095605
-
Crystal structure of the glycosidase family 73 peptidoglycan hydrolase FlgJ
-
Hashimoto, W., Ochiai, A., Momma, K., Itoh, T., Mikami, B., Maruyama, Y., and Murata, K. (2009) Crystal structure of the glycosidase family 73 peptidoglycan hydrolase FlgJ. Biochem. Biophys. Res. Commun. 381, 16-21
-
(2009)
Biochem. Biophys. Res. Commun.
, vol.381
, pp. 16-21
-
-
Hashimoto, W.1
Ochiai, A.2
Momma, K.3
Itoh, T.4
Mikami, B.5
Maruyama, Y.6
Murata, K.7
-
55
-
-
84864112952
-
The Salmonella type III secretion system inner rod protein PrgJ is partially folded
-
Zhong, D., Lefebre, M., Kaur, K., McDowell, M. A., Gdowski, C., Jo, S., Wang, Y., Benedict, S. H., Lea, S. M., Galan, J. E., and De Guzman, R. N. (2012) The Salmonella type III secretion system inner rod protein PrgJ is partially folded. J. Biol. Chem. 287, 25303-25311
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 25303-25311
-
-
Zhong, D.1
Lefebre, M.2
Kaur, K.3
McDowell, M.A.4
Gdowski, C.5
Jo, S.6
Wang, Y.7
Benedict, S.H.8
Lea, S.M.9
Galan, J.E.10
De Guzman, R.N.11
-
56
-
-
84909952646
-
The essential protein for bacterial flagella formation FlgJ functions as a β-N-acetylglucosaminidase
-
Herlihey, F. A., Moynihan, P. J., and Clarke, A. J. (2014) The essential protein for bacterial flagella formation FlgJ functions as a β-N-acetylglucosaminidase. J. Biol. Chem. 289, 31029-31042
-
(2014)
J. Biol. Chem.
, vol.289
, pp. 31029-31042
-
-
Herlihey, F.A.1
Moynihan, P.J.2
Clarke, A.J.3
-
57
-
-
84871732564
-
Peptidoglycan maturation enzymes affect flagellar functionality in bacteria
-
Roure, S., Bonis, M., Chaput, C., Ecobichon, C., Mattox, A., Barrière, C., Geldmacher, N., Guadagnini, S., Schmitt, C., Prévost, M. C., Labigne, A., Backert, S., Ferrero, R. L., and Boneca, I. G. (2012) Peptidoglycan maturation enzymes affect flagellar functionality in bacteria. Mol. Microbiol. 86, 845-856
-
(2012)
Mol. Microbiol.
, vol.86
, pp. 845-856
-
-
Roure, S.1
Bonis, M.2
Chaput, C.3
Ecobichon, C.4
Mattox, A.5
Barrière, C.6
Geldmacher, N.7
Guadagnini, S.8
Schmitt, C.9
Prévost, M.C.10
Labigne, A.11
Backert, S.12
Ferrero, R.L.13
Boneca, I.G.14
-
58
-
-
0038010148
-
Protein-peptidoglycan interactions modulate the assembly of the needle complex in the Salmonella invasion-associated type III secretion system
-
Pucciarelli, M. G., and García-del Portillo, F. (2003) Protein-peptidoglycan interactions modulate the assembly of the needle complex in the Salmonella invasion-associated type III secretion system. Mol. Microbiol. 48, 573-585
-
(2003)
Mol. Microbiol.
, vol.48
, pp. 573-585
-
-
Pucciarelli, M.G.1
García-Del Portillo, F.2
-
59
-
-
36549034876
-
Pseudomonas syringae lytic transglycosylases coregulated with the type III secretion system contribute to the translocation of effector proteins into plant cells
-
Oh, H. S., Kvitko, B. H., Morello, J. E., and Collmer, A. (2007) Pseudomonas syringae lytic transglycosylases coregulated with the type III secretion system contribute to the translocation of effector proteins into plant cells. J. Bacteriol. 189, 8277-8289
-
(2007)
J. Bacteriol.
, vol.189
, pp. 8277-8289
-
-
Oh, H.S.1
Kvitko, B.H.2
Morello, J.E.3
Collmer, A.4
|