-
1
-
-
0031912354
-
Morphogenesis of Escherichia coli
-
Nanninga N. Morphogenesis of Escherichia coli. Microbiol. Mol. Biol. Rev. 62 (1998) 110-129
-
(1998)
Microbiol. Mol. Biol. Rev.
, vol.62
, pp. 110-129
-
-
Nanninga, N.1
-
3
-
-
0029781803
-
Bacterial walls, peptidoglycan hydrolases, autolysins, and autolysis
-
Shockman G.D., Daneo-Moore L., Kariyama R., and Massidda O. Bacterial walls, peptidoglycan hydrolases, autolysins, and autolysis. Microb. Drug Resist. 2 (1996) 95-98
-
(1996)
Microb. Drug Resist.
, vol.2
, pp. 95-98
-
-
Shockman, G.D.1
Daneo-Moore, L.2
Kariyama, R.3
Massidda, O.4
-
5
-
-
0030032332
-
Chitinases, chitosanases, and lysozymes can be divided into prokaryotic and eukaryotic families sharing a conserved core
-
Monzingo A.F., Marcotte E.M., Hart P.J., and Robertus J.D. Chitinases, chitosanases, and lysozymes can be divided into prokaryotic and eukaryotic families sharing a conserved core. Nat. Struct. Biol. 3 (1996) 133-140
-
(1996)
Nat. Struct. Biol.
, vol.3
, pp. 133-140
-
-
Monzingo, A.F.1
Marcotte, E.M.2
Hart, P.J.3
Robertus, J.D.4
-
6
-
-
27944434246
-
Recent structural insights into the expanding world of carbohydrate-active enzymes
-
Davies G.J., Gloster T.M., and Henrissat B. Recent structural insights into the expanding world of carbohydrate-active enzymes. Curr. Opin. Struct. Biol. 15 (2005) 637-645
-
(2005)
Curr. Opin. Struct. Biol.
, vol.15
, pp. 637-645
-
-
Davies, G.J.1
Gloster, T.M.2
Henrissat, B.3
-
7
-
-
58149200943
-
The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics
-
Cantarel B.L., Coutinho P.M., Rancurel C., Bernard T., Lombard V., and Henrissat B. The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics. Nucleic Acids Res. 37 (2009) D233-238
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Cantarel, B.L.1
Coutinho, P.M.2
Rancurel, C.3
Bernard, T.4
Lombard, V.5
Henrissat, B.6
-
9
-
-
35549005302
-
Crystal structure of glycoside hydrolase family 78 α-l-rhamnosidase from Bacillus sp. GL1
-
Cui Z., Maruyama Y., Mikami B., Hashimoto W., and Murata K. Crystal structure of glycoside hydrolase family 78 α-l-rhamnosidase from Bacillus sp. GL1. J. Mol. Biol. 374 (2007) 384-398
-
(2007)
J. Mol. Biol.
, vol.374
, pp. 384-398
-
-
Cui, Z.1
Maruyama, Y.2
Mikami, B.3
Hashimoto, W.4
Murata, K.5
-
10
-
-
37549011426
-
A novel structural fold in polysaccharide lyases: Bacillus subtilis family 11 rhamnogalacturonan lyase YesW with an eight-bladed β-propeller
-
Ochiai A., Itoh T., Maruyama Y., Kawamata A., Mikami B., Hashimoto W., and Murata K. A novel structural fold in polysaccharide lyases: Bacillus subtilis family 11 rhamnogalacturonan lyase YesW with an eight-bladed β-propeller. J. Biol. Chem. 282 (2007) 37134-37145
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 37134-37145
-
-
Ochiai, A.1
Itoh, T.2
Maruyama, Y.3
Kawamata, A.4
Mikami, B.5
Hashimoto, W.6
Murata, K.7
-
11
-
-
0033053893
-
Peptidoglycan-hydrolyzing activity of the FlgJ protein, essential for flagellar rod formation in Salmonella typhimurium
-
Nambu T., Minamino T., Macnab R.M., and Kutsukake K. Peptidoglycan-hydrolyzing activity of the FlgJ protein, essential for flagellar rod formation in Salmonella typhimurium. J. Bacteriol. 181 (1999) 1555-1561
-
(1999)
J. Bacteriol.
, vol.181
, pp. 1555-1561
-
-
Nambu, T.1
Minamino, T.2
Macnab, R.M.3
Kutsukake, K.4
-
12
-
-
0037457806
-
LytG of Bacillus subtilis is a novel peptidoglycan hydrolase: the major active glucosaminidase
-
Horsburgh G.J., Atrih A., Williamson M.P., and Foster S.J. LytG of Bacillus subtilis is a novel peptidoglycan hydrolase: the major active glucosaminidase. Biochemistry 42 (2003) 257-264
-
(2003)
Biochemistry
, vol.42
, pp. 257-264
-
-
Horsburgh, G.J.1
Atrih, A.2
Williamson, M.P.3
Foster, S.J.4
-
13
-
-
0035860359
-
The role in flagellar rod assembly of the N-terminal domain of Salmonella FlgJ, a flagellum-specific muramidase
-
Hirano T., Minamino T., and Macnab R.M. The role in flagellar rod assembly of the N-terminal domain of Salmonella FlgJ, a flagellum-specific muramidase. J. Mol. Biol. 312 (2001) 359-369
-
(2001)
J. Mol. Biol.
, vol.312
, pp. 359-369
-
-
Hirano, T.1
Minamino, T.2
Macnab, R.M.3
-
14
-
-
58549099091
-
Crystallization and preliminary X-ray analysis of a C-terminal fragment of FlgJ-a putative flagellar rod cap protein from Salmonella
-
Kikuchi Y., Matsunami H., Yamane M., Imada K., and Namba K. Crystallization and preliminary X-ray analysis of a C-terminal fragment of FlgJ-a putative flagellar rod cap protein from Salmonella. Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 65 (2009) 17-20
-
(2009)
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun.
, vol.65
, pp. 17-20
-
-
Kikuchi, Y.1
Matsunami, H.2
Yamane, M.3
Imada, K.4
Namba, K.5
-
16
-
-
4444297105
-
Molecular identification and characterization of an alginate-binding protein on the cell surface of Sphingomonas sp. A1
-
He J., Nankai H., Hashimoto W., and Murata K. Molecular identification and characterization of an alginate-binding protein on the cell surface of Sphingomonas sp. A1. Biochem. Biophys. Res. Commun. 322 (2004) 712-717
-
(2004)
Biochem. Biophys. Res. Commun.
, vol.322
, pp. 712-717
-
-
He, J.1
Nankai, H.2
Hashimoto, W.3
Murata, K.4
-
17
-
-
27144480291
-
Proteomics-based identification of outer-membrane proteins responsible for import of macromolecules in Sphingomonas sp. A1: alginate-binding flagellin on the cell surface
-
Hashimoto W., He J., Wada Y., Nankai H., Mikami B., and Murata K. Proteomics-based identification of outer-membrane proteins responsible for import of macromolecules in Sphingomonas sp. A1: alginate-binding flagellin on the cell surface. Biochemistry 44 (2005) 13783-13794
-
(2005)
Biochemistry
, vol.44
, pp. 13783-13794
-
-
Hashimoto, W.1
He, J.2
Wada, Y.3
Nankai, H.4
Mikami, B.5
Murata, K.6
-
18
-
-
38849115087
-
Crystal structure of a novel bacterial cell-surface flagellin binding to a polysaccharide
-
Maruyama Y., Momma M., Mikami B., Hashimoto W., and Murata K. Crystal structure of a novel bacterial cell-surface flagellin binding to a polysaccharide. Biochemistry 47 (2008) 1393-13402
-
(2008)
Biochemistry
, vol.47
, pp. 1393-13402
-
-
Maruyama, Y.1
Momma, M.2
Mikami, B.3
Hashimoto, W.4
Murata, K.5
-
19
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Sambrook J., Fritsch E.F., and Maniatis T. Molecular Cloning, A Laboratory Manual. second ed. (1989), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
(1989)
Molecular Cloning, A Laboratory Manual. second ed.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
20
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227 (1970) 680-685
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
21
-
-
0017184389
-
A rapid and sensitive method for the quantification of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford M.M. A rapid and sensitive method for the quantification of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72 (1976) 248-254
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
22
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinoski Z., and Minor W. Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 276 (1997) 307-326
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinoski, Z.1
Minor, W.2
-
24
-
-
0013054388
-
Macromolecular phasing with SHELXE
-
Sheldrick G.M. Macromolecular phasing with SHELXE. Z. Kristallogr. 217 (2002) 644-650
-
(2002)
Z. Kristallogr.
, vol.217
, pp. 644-650
-
-
Sheldrick, G.M.1
-
25
-
-
0032964481
-
Automated protein model building combined with iterative structure refinement
-
Perrakis A., Morris R., and Lamzin V.S. Automated protein model building combined with iterative structure refinement. Nat. Struct. Biol. 6 (1999) 458-463
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 458-463
-
-
Perrakis, A.1
Morris, R.2
Lamzin, V.S.3
-
26
-
-
0028103275
-
The CCP4 suite: Programs for protein crystallography
-
Collaborative Computational Project
-
Collaborative Computational Project, The CCP4 suite: programs for protein crystallography, Acta Crystallogr. D50 (1994) 760-763.
-
(1994)
Acta Crystallogr
, vol.D50
, pp. 760-763
-
-
-
27
-
-
13244281317
-
Coot: model-building tools for molecular graphics
-
Emsley P., and Cowtan K. Coot: model-building tools for molecular graphics. Acta Crystallogr. D60 (2004) 2126-2132
-
(2004)
Acta Crystallogr.
, vol.D60
, pp. 2126-2132
-
-
Emsley, P.1
Cowtan, K.2
-
28
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
Murshudov G.N., Vagin A.A., and Dodson E.J. Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr. D53 (1997) 240-255
-
(1997)
Acta Crystallogr.
, vol.D53
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
29
-
-
84893482610
-
A solution for the best rotation to relate two sets of vectors
-
Kabsch W. A solution for the best rotation to relate two sets of vectors. Acta Crystallogr. A32 (1976) 922-923
-
(1976)
Acta Crystallogr.
, vol.A32
, pp. 922-923
-
-
Kabsch, W.1
-
31
-
-
61649101259
-
-
W.L. DeLano, on World Wide Web http://www.pymol.org (2002).
-
W.L. DeLano, on World Wide Web http://www.pymol.org (2002).
-
-
-
-
32
-
-
0033954256
-
The Protein Data Bank
-
Berman H.M., Westbrook J., Feng Z., Gilliland G., Bhat T.N., Weissig H., Shindyalov I.N., and Bourne P.E. The Protein Data Bank. Nucleic Acids Res. 28 (2000) 235-242
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
33
-
-
0027440362
-
Protein structure comparison by alignment of distance matrices
-
Holm L., and Sander C. Protein structure comparison by alignment of distance matrices. J. Mol. Biol. 233 (1993) 123-138
-
(1993)
J. Mol. Biol.
, vol.233
, pp. 123-138
-
-
Holm, L.1
Sander, C.2
-
34
-
-
0029692068
-
Lysozyme: a model enzyme in protein crystallography
-
Strynadka N.C., and James M.N. Lysozyme: a model enzyme in protein crystallography. EXS 75 (1996) 185-222
-
(1996)
EXS
, vol.75
, pp. 185-222
-
-
Strynadka, N.C.1
James, M.N.2
-
35
-
-
57749177639
-
Catalytic reaction mechanism of goose egg-white lysozyme by molecular modeling of enzyme-substrate complex
-
Hirakawa H., Ochi A., Kawahara Y., Kawamura S., Torikata T., and Kuhara S. Catalytic reaction mechanism of goose egg-white lysozyme by molecular modeling of enzyme-substrate complex. J. Biochem. 144 (2008) 753-761
-
(2008)
J. Biochem.
, vol.144
, pp. 753-761
-
-
Hirakawa, H.1
Ochi, A.2
Kawahara, Y.3
Kawamura, S.4
Torikata, T.5
Kuhara, S.6
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