메뉴 건너뛰기




Volumn 61, Issue 4, 2015, Pages 281-292

Molecular responses of Frankia sp. Strain QA3 to Naphthalene

Author keywords

Actinobacteria; Aromatic hydrocarbon degradation; Bioinformatics; Bioremediation; Plant microbe interactions; Proteome; qRT PCR

Indexed keywords

AROMATIC COMPOUND; BACTERIAL PROTEIN; CARBON; DIOXYGENASE; NAPHTHALENE; NAPHTHALENE DERIVATIVE; PROTEOME; SOIL POLLUTANT;

EID: 84926138653     PISSN: 00084166     EISSN: 14803275     Source Type: Journal    
DOI: 10.1139/cjm-2014-0786     Document Type: Article
Times cited : (12)

References (80)
  • 1
    • 84881240654 scopus 로고    scopus 로고
    • Silencing of the chalcone synthase gene in Casuarina glauca highlights the important role of flavonoids during nodulation
    • PMID:23692063
    • Abdel-Lateif, K., Vaissayre, V., Gherbi, H., Verries, C., Meudec, E., Perrine-Walker, F., et al. 2013. Silencing of the chalcone synthase gene in Casuarina glauca highlights the important role of flavonoids during nodulation. New Phytol. 199(4): 1012-1021.doi:10.1111/nph.12326.PMID:23692063.
    • (2013) New Phytol , vol.199 , Issue.4 , pp. 1012-1021
    • Abdel-Lateif, K.1    Vaissayre, V.2    Gherbi, H.3    Verries, C.4    Meudec, E.5    Perrine-Walker, F.6
  • 2
    • 33846298496 scopus 로고    scopus 로고
    • Response to (Chloro)biphenyls of the polychlorobiphenyl-degraderBurkholderia xenovorans LB400 involves stress proteins also induced by heat shock and oxidative stress
    • PMID:17166226
    • Agullo, L., Camara, B., Martinez, P., Latorre, V., and Seeger, M. 2007. Response to (chloro)biphenyls of the polychlorobiphenyl-degrader Burkholderia xenovorans LB400 involves stress proteins also induced by heat shock and oxidative stress. FEMS Microbiol. Lett. 267(2): 167-175.doi:10.1111/j.1574-6968.2006.00554.x.PMID:17166226.
    • (2007) FEMS Microbiol. Lett , vol.267 , Issue.2 , pp. 167-175
    • Agullo, L.1    Camara, B.2    Martinez, P.3    Latorre, V.4    Seeger, M.5
  • 3
    • 0032487127 scopus 로고    scopus 로고
    • Growth kinetics of Pseudomonas putida G7 on naphthalene and occurrence of naphthalene toxicity during nutrient deprivation
    • PMID: 10099376
    • Ahn, I.S., Ghiorse, W.C., Lion, L.W., and Shuler, M.L. 1998. Growth kinetics of Pseudomonas putida G7 on naphthalene and occurrence of naphthalene toxicity during nutrient deprivation. Biotechnol. Bioeng. 59(5): 587-594.doi:10.1002/(SICI)1097-0290(19980905)59:5<587::AID-BIT9>3.0.CO;2-6.PMID:10099376.
    • (1998) Biotechnol. Bioeng , vol.59 , Issue.5 , pp. 587-594
    • Ahn, I.S.1    Ghiorse, W.C.2    Lion, L.W.3    Shuler, M.L.4
  • 4
    • 84859211996 scopus 로고    scopus 로고
    • Petroleum and polycyclic aromatic hydrocarbons (PAHs) degradation and naphthalene metabolism in Streptomycessp. (ERI-CPDA-1) isolated from oil contaminated soil
    • PMID:22425516
    • Balachandran, C., Duraipandiyan, V., Balakrishna, K., and Ignacimuthu, S. 2012. Petroleum and polycyclic aromatic hydrocarbons (PAHs) degradation and naphthalene metabolism in Streptomyces sp. (ERI-CPDA-1) isolated from oil contaminated soil. Bioresour. Technol. 112: 83-90.doi:10.1016/j.biortech.2012.02.059.PMID:22425516.
    • (2012) Bioresour. Technol , vol.112 , pp. 83-90
    • Balachandran, C.1    Duraipandiyan, V.2    Balakrishna, K.3    Ignacimuthu, S.4
  • 5
    • 0017288843 scopus 로고
    • Role and regulation of ortho and meta pathways of catechol metabolism in pseudomonads metabolizing naphthalene and salicylate
    • PMID:1245462
    • Barnsley, E.A. 1976. Role and regulation of ortho and meta pathways of catechol metabolism in pseudomonads metabolizing naphthalene and salicylate. J. Bacteriol. 125(2): 404-408. PMID:1245462.
    • (1976) J. Bacteriol. 125(2): 404-408
    • Barnsley, E.A.1
  • 6
    • 0030904319 scopus 로고    scopus 로고
    • Flavonoid-like compounds from seeds of red alder (Alnus rubra) influence host nodulation by Frankia (Actinomycetales)
    • Benoit, L.F., and Berry, A.M. 1997. Flavonoid-like compounds from seeds of red alder (Alnus rubra) influence host nodulation by Frankia (Actinomycetales). Physiol. Plant. 99(4): 588-593.doi:10.1111/j.1399-3054.1997.tb05361.x.
    • (1997) Physiol. Plant , vol.99 , Issue.4 , pp. 588-593
    • Benoit, L.F.1    Berry, A.M.2
  • 7
    • 34250211134 scopus 로고    scopus 로고
    • Recent advances in the biogeography and genecology of symbiotic Frankia and its host plants
    • Benson, D.R., and Dawson, J.O. 2007. Recent advances in the biogeography and genecology of symbiotic Frankia and its host plants. Physiol. Plant. 130(3): 318-330.doi:10.1111/j.1399-3054.2007.00934.x.
    • (2007) Physiol. Plant , vol.130 , Issue.3 , pp. 318-330
    • Benson, D.R.1    Dawson, J.O.2
  • 8
    • 0027191394 scopus 로고
    • Biology of Frankia strains, actinomycete symbionts of actinorhizal plants
    • PMID: 8336669
    • Benson, D.R., and Silvester, W.B. 1993. Biology of Frankia strains, actinomycete symbionts of actinorhizal plants.microbiol. Rev. 57(2): 293-319. PMID: 8336669.
    • (1993) Biol. Rev , vol.57 , Issue.2 , pp. 293-319
    • Benson, D.R.1    Silvester, W.B.2
  • 9
    • 0345161811 scopus 로고    scopus 로고
    • Genetic characterization and evolutionary implications of a chromosomally encoded naphthalenedegradation upper pathway from Pseudomonas stutzeri AN10
    • PMID:10433976
    • Bosch, R., Garcia-Valdes, E., and Moore, E.R.B. 1999. Genetic characterization and evolutionary implications of a chromosomally encoded naphthalenedegradation upper pathway from Pseudomonas stutzeri AN10. Gene, 236(1): 149-157.doi:10.1016/S0378-1119(99)00241-3.PMID:10433976.
    • (1999) Gene , vol.236 , Issue.1 , pp. 149-157
    • Bosch, R.1    Garcia-Valdes, E.2    Moore, E.3
  • 10
    • 0343485080 scopus 로고    scopus 로고
    • Complete nucleotide sequence and evolutionary significance of a chromosomally encoded naphthalene-degradation lower pathway from Pseudomonas stutzeri AN10
    • PMID:10713446
    • Bosch, R., Garcia-Valdes, E., and Moore, E.R.B. 2000. Complete nucleotide sequence and evolutionary significance of a chromosomally encoded naphthalene-degradation lower pathway from Pseudomonas stutzeri AN10. Gene, 245(1): 65-74.doi:10.1016/S0378-1119(00)00038-X.PMID:10713446.
    • (2000) Gene , vol.245 , Issue.1 , pp. 65-74
    • Bosch, R.1    Garcia-Valdes, E.2    Moore, E.3
  • 11
    • 34247639655 scopus 로고    scopus 로고
    • Enzymatic and genetic profiles in environmental strains grown on polycyclic aromatic hydrocarbons
    • PMID:17109059
    • Cavalca, L., Guerrieri, N., Colombo, M., Pagani, S., and Andreoni, V. 2007. Enzymatic and genetic profiles in environmental strains grown on polycyclic aromatic hydrocarbons. Antonie Van Leeuwenhoek, 91(4): 315-325.doi:10.1007/s10482-006-9119-1.PMID:17109059.
    • (2007) Antonie Van Leeuwenhoek , vol.91 , Issue.4 , pp. 315-325
    • Cavalca, L.1    Guerrieri, N.2    Colombo, M.3    Pagani, S.4    Andreoni, V.5
  • 12
    • 59849122147 scopus 로고    scopus 로고
    • The lack of rhodanese RhdA affects the sensitivity of Azotobacfer vinelandii to oxidative events
    • PMID:18925874
    • Cereda, A., Carpen, A., Picariello, G., Tedeschi, G., and Pagani, S. 2009. The lack of rhodanese RhdA affects the sensitivity of Azotobacfer vinelandii to oxidative events. Biochem. J. 418: 135-143.doi:10.1042/BJ20081218.PMID:18925874.
    • (2009) Biochem. J , vol.418 , pp. 135-143
    • Cereda, A.1    Carpen, A.2    Picariello, G.3    Tedeschi, G.4    Pagani, S.5
  • 13
    • 78149415157 scopus 로고    scopus 로고
    • Life in soil by the actinorhizal root nodule endophyte Frankia
    • Chaia, E.E., Wall, L.G., and Huss-Danell, K. 2010. Life in soil by the actinorhizal root nodule endophyte Frankia. A review. Symbiosis, 51(3): 201-226.doi:10.1007/s13199-010-0086-y.
    • (2010) A Review. Symbiosis , vol.51 , Issue.3 , pp. 201-226
    • Chaia, E.E.1    Wall, L.G.2    Huss-Danell, K.3
  • 14
    • 24044487850 scopus 로고    scopus 로고
    • Comprehensive analysis of a multidimensional liquid chromatography mass spectrometry dataset acquired on a quadrupole selecting, quadrupole collision cell, time-of-flight mass spectrometer — I. How much of the data is theoretically interpretable by search engines?
    • PMID:15923566
    • Chalkley, R.J., Baker, P.R., Hansen, K.C., Medzihradszky, K.F., Allen, N.P., Rexach, M., et al. 2005. Comprehensive analysis of a multidimensional liquid chromatography mass spectrometry dataset acquired on a quadrupole selecting, quadrupole collision cell, time-of-flight mass spectrometer — I. How much of the data is theoretically interpretable by search engines? Mol. Cell. Proteomics, 4(8): 1189-1193.doi:10.1074/mcp.D500001-MCP200.PMID:15923566.
    • (2005) Mol. Cell. Proteomics , vol.4 , Issue.8 , pp. 1189-1193
    • Chalkley, R.J.1    Baker, P.R.2    Hansen, K.C.3    Medzihradszky, K.F.4    Allen, N.P.5    Rexach, M.6
  • 15
    • 9344221072 scopus 로고    scopus 로고
    • Unraveling the interface of signal recognition particle and its receptor by using chemical cross-linking and tandem mass spectrometry
    • PMID: 15546976
    • Chu, F.X., Shan, S.O., Moustakas, D.T., Alber, F., Egea, P.F., Stroud, R.M., et al. 2004. Unraveling the interface of signal recognition particle and its receptor by using chemical cross-linking and tandem mass spectrometry. Proc. Natl. Acad. Sci. U.S.A. 101(47): 16454-16459.doi:10.1073/pnas.0407456101.PMID:15546976.
    • (2004) Proc. Natl. Acad. Sci. U.S.A. , vol.101 , Issue.47 , pp. 16454-16459
    • Chu, F.X.1    Shan, S.O.2    Moustakas, D.T.3    Alber, F.4    Egea, P.F.5    Stroud, R.M.6
  • 16
    • 77952890488 scopus 로고    scopus 로고
    • Identification and characterization of genes involved in naphthalene degradation in Rhodococcus opacus R7
    • PMID:20195856
    • Di Gennaro, P., Terreni, P., Masi, G., Botti, S., De Ferra, F., and Bestetti, G. 2010. Identification and characterization of genes involved in naphthalene degradation in Rhodococcus opacus R7. Appl.microbiol. Biotechnol. 87(1): 297-308.doi:10.1007/s00253-010-2497-3.PMID:20195856.
    • (2010) Appl.Microbiol. Biotechnol , vol.87 , Issue.1 , pp. 297-308
    • Di Gennaro, P.1    Terreni, P.2    Masi, G.3    Botti, S.4    De Ferra, F.5    Bestetti, G.6
  • 17
    • 0031909725 scopus 로고    scopus 로고
    • Characterization of a protocatechuate catabolic gene cluster from Rhodococcus opacus 1CP: Evidence for a merged enzyme with 4-carboxymuconolactonedecarboxylating and 3-oxoadipate enol-lactone-hydrolyzing activity
    • PMID:9495744
    • Eulberg, D., Lakner, S., Golovleva, L.A., and Schlomann, M. 1998. Characterization of a protocatechuate catabolic gene cluster from Rhodococcus opacus 1CP: Evidence for a merged enzyme with 4-carboxymuconolactonedecarboxylating and 3-oxoadipate enol-lactone-hydrolyzing activity. J. Bacteriol. 180(5): 1072-1081. PMID:9495744.
    • (1998) J. Bacteriol , vol.180 , Issue.5 , pp. 1072-1081
    • Eulberg, D.1    Lakner, S.2    Golovleva, L.A.3    Schlomann, M.4
  • 18
    • 84866172978 scopus 로고    scopus 로고
    • Enhanced tolerance to naphthalene and enhanced rhizoremediation performance for Pseudomonas putida KT2440 via the NAH7 catabolic plasmid
    • PMID:22582075
    • Fernandez, M., Niqui-Arroyo, J.L., Conde, S., Ramos, J.L., and Duque, E. 2012. Enhanced tolerance to naphthalene and enhanced rhizoremediation performance for Pseudomonas putida KT2440 via the NAH7 catabolic plasmid. Appl. Environ.microbiol. 78(15): 5104-5110.doi:10.1128/AEM.00619-12.PMID:22582075.
    • (2012) Appl. Environ.Microbiol , vol.78 , Issue.15 , pp. 5104-5110
    • Fernandez, M.1    Niqui-Arroyo, J.L.2    Conde, S.3    Ramos, J.L.4    Duque, E.5
  • 19
    • 0031967070 scopus 로고    scopus 로고
    • A gene cluster encoding steps in conversion of naphthalene to gentisate in Pseudomonas sp. Strain U2
    • PMID:9573207
    • Fuenmayor, S.L., Wild, M., Boyes, A.L., and Williams, P.A. 1998. A gene cluster encoding steps in conversion of naphthalene to gentisate in Pseudomonas sp. strain U2. J. Bacteriol. 180(9): 2522-2530. PMID:9573207.
    • (1998) J. Bacteriol , vol.180 , Issue.9 , pp. 2522-2530
    • Fuenmayor, S.L.1    Wild, M.2    Boyes, A.L.3    Williams, P.A.4
  • 20
    • 84982887642 scopus 로고    scopus 로고
    • Draft Genome sequence of Frankia sp. Strain CN3, an atypical, non-infective (Nod-) ineffective (Fix-) isolate from Coriaria nepalensis
    • PMID:23516212
    • Ghodbhane-Gtari, F, Beauchemin, N., Bruce, D., Chain, P., Chen, A., Walston Davenport, K., et al. 2013. Draft Genome sequence of Frankia sp. strain CN3, an atypical, non-infective (Nod-) ineffective (Fix-) isolate from Coriaria nepalensis. Genome Announc. 1(2): e00085-13.doi:10.1128/genomeA.00085-13.PMID:23516212.
    • (2013) Genome Announc , vol.1 , Issue.2 , pp. 85-113
    • Ghodbhane-Gtari, F.1    Beauchemin, N.2    Bruce, D.3    Chain, P.4    Chen, A.5    Walston Davenport, K.6
  • 21
    • 84999266625 scopus 로고    scopus 로고
    • Draft genome sequence of Frankiasp. Strain BMG5.23, a salt-tolerant nitrogen-fixing actinobacterium isolated from the root nodules ofCasuarina glauca grown in Tunisia
    • PMID:24874687
    • Ghodhbane-Gtari, F, Hurst, S.G., IV, Oshone, R., Morris, K., Abebe-Akele, F., Thomas, W.K., et al. 2014. Draft genome sequence of Frankia sp. strain BMG5.23, a salt-tolerant nitrogen-fixing actinobacterium isolated from the root nodules of Casuarina glauca grown in Tunisia. Genome Announc. 2(3): e00520-14.doi:10.1128/genomeA.00520-14.PMID:24874687.
    • (2014) Genome Announc , vol.2 , Issue.3 , pp. 520-524
    • Ghodhbane-Gtari, F.1    Hurst, S.G.2    Oshone, R.3    Morris, K.4    Abebe-Akele, F.5    Thomas, W.K.6
  • 22
    • 0026747724 scopus 로고
    • Naphthalene degradation via salicylate and gentisate by Rhodococcus sp. Strain B4
    • PMID:1622263
    • Grund, E., Denecke, B., and Eichenlaub, R. 1992. Naphthalene degradation via salicylate and gentisate by Rhodococcus sp. strain B4. Appl. Environ.microbiol. 58(6): 1874-1877. PMID:1622263.
    • (1992) Appl. Environ.Microbiol , vol.58 , Issue.6 , pp. 1874-1877
    • Grund, E.1    Denecke, B.2    Eichenlaub, R.3
  • 23
    • 77951809436 scopus 로고    scopus 로고
    • Data processing algorithms for analysis of high resolution MSMS spectra of peptides with complex patterns of posttranslational modifications
    • PMID:19955076
    • Guan, S.H., and Burlingame, A.L. 2010. Data processing algorithms for analysis of high resolution MSMS spectra of peptides with complex patterns of posttranslational modifications. Mol. Cell. Proteomics, 9(5): 804-810.doi:10.1074/mcp.M900431-MCP200.PMID:19955076.
    • (2010) Mol. Cell. Proteomics , vol.9 , Issue.5 , pp. 804-810
    • Guan, S.H.1    Burlingame, A.L.2
  • 24
    • 84871371802 scopus 로고    scopus 로고
    • Metaproteogenomic insights beyond bacterial response to naphthalene exposure and bio-stimulation
    • PMID:22832345
    • Guazzaroni, M.E., Herbst, F.A., Lores, I., Tamames, J., Pelaez, A.I., Lopez-Cortes, N., et al. 2013. Metaproteogenomic insights beyond bacterial response to naphthalene exposure and bio-stimulation. ISME J. 7(1): 122-136.doi:10.1038/ismej.2012.82.PMID:22832345.
    • (2013) ISME J , vol.7 , Issue.1 , pp. 122-136
    • Guazzaroni, M.E.1    Herbst, F.A.2    Lores, I.3    Tamames, J.4    Pelaez, A.I.5    Lopez-Cortes, N.6
  • 25
    • 0001998996 scopus 로고
    • Morphology, physiology and infectivity of 2 Frankia isolates an1 and an2 from root nodules of Alnus nitida
    • Hafeez, F., Akkermans, A.D.L., and Chaudhary, A.H. 1984. Morphology, physiology and infectivity of 2 Frankia isolates an1 and an2 from root nodules of Alnus nitida. Plant Soil, 78(1-2): 45-59.doi:10.1007/BF02277839.
    • (1984) Plant Soil , vol.78 , Issue.1-2 , pp. 45-59
    • Hafeez, F.1    Akkermans, A.2    Chaudhary, A.H.3
  • 26
    • 0029795374 scopus 로고    scopus 로고
    • The _-ketoadipate pathway and the biology of self-identity
    • PMID:8905091
    • Harwood, C.S., and Parales, R.E. 1996. The _-ketoadipate pathway and the biology of self-identity. Annu. Rev.microbiol. 50: 553-590.doi:10.1146/annurev.micro.50.1.553.PMID:8905091.
    • (1996) Annu. Rev.Microbiol , vol.50 , pp. 553-590
    • Harwood, C.S.1    Parales, R.E.2
  • 27
    • 84999266625 scopus 로고    scopus 로고
    • Draft genome sequence of Frankia sp. Strain Thr, a nitrogen-fixing actinobacterium isolated from the root nodules of Casuarina cunninghamiana grown in Egypt
    • PMID:24855310
    • Hurst, S.G., Oshone, R., Ghodhbane-Gtari, F., Morris, K., Abebe-Akele, F., Thomas, W.K., et al. 2014. Draft genome sequence of Frankia sp. strain Thr, a nitrogen-fixing actinobacterium isolated from the root nodules of Casuarina cunninghamiana grown in Egypt. Genome Announc. 2(3): e00493-14.doi:10.1128/genomeA.00493-14.PMID:24855310.
    • (2014) Genome Announc , vol.2 , Issue.3 , pp. 493-504
    • Hurst, S.G.1    Oshone, R.2    Ghodhbane-Gtari, F.3    Morris, K.4    Abebe-Akele, F.5    Thomas, W.K.6
  • 28
    • 0034087467 scopus 로고    scopus 로고
    • Characterization of the protocatechuic acid catabolic gene cluster from Streptomyces sp. Strain 2065
    • PMID:10742233
    • Iwagami, S.G., Yang, K.Q., and Davies, J. 2000. Characterization of the protocatechuic acid catabolic gene cluster from Streptomyces sp. strain 2065. Appl. Environ.microbiol. 66(4): 1499-1508.doi:10.1128/AEM.66.4.1499-1508.2000.PMID:10742233.
    • (2000) Appl. Environ.Microbiol , vol.66 , Issue.4 , pp. 1499-1508
    • Iwagami, S.G.1    Yang, K.Q.2    Davies, J.3
  • 29
    • 0027621195 scopus 로고
    • Structural and enzymatic comparison of lignostilbene-_,_-dioxygenase isozymes, I, II, and III, from Pseudomonas paucimobilisTmy1009
    • PMID:7763880
    • Kamoda, S., and Saburi, Y. 1993. Structural and enzymatic comparison of lignostilbene-_,_-dioxygenase isozymes, I, II, and III, from Pseudomonas paucimobilis Tmy1009. Biosci. Biotechnol. Biochem. 57(6): 931-934.doi:10.1271/bbb.57.931.PMID:7763880.
    • (1993) Biosci. Biotechnol. Biochem , vol.57 , Issue.6 , pp. 931-934
    • Kamoda, S.1    Saburi, Y.2
  • 30
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: Kyoto Encyclopedia of Genes and Genomes
    • PMID: 10592173
    • Kanehisa, M., and Goto, S. 2000. KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res. 28(1): 27-30.doi:10.1093/nar/28.1.27.PMID:10592173.
    • (2000) Nucleic Acids Res , vol.28 , Issue.1 , pp. 27-30
    • Kanehisa, M.1    Goto, S.2
  • 31
    • 35448988447 scopus 로고    scopus 로고
    • Overexpressing antioxidant enzymes enhances naphthalene biodegradation in Pseudomonas sp. Strain
    • PMID:17906124
    • Kang, Y.S., Lee, Y., Jung, H., Jeon, C.O., Madsen, E.L., and Park, W. 2007. Overexpressing antioxidant enzymes enhances naphthalene biodegradation in Pseudomonas sp. strain As1.microbiology, 153: 3246-3254.doi:10.1099/mic.0.2007/008896-0.PMID:17906124.
    • (2007) As1.Microbiology , vol.153 , pp. 3246-3254
    • Kang, Y.S.1    Lee, Y.2    Jung, H.3    Jeon, C.O.4    Madsen, E.L.5    Park, W.6
  • 32
    • 79960159527 scopus 로고    scopus 로고
    • A mutation in dnaK causes stabilization of the heat shock sigma factor _32, accumulation of heat shock proteins and increase in toluene-resistance in Pseudomonas putida
    • PMID: 20880327
    • Kobayashi, Y., Ohtsu, I., Fujimura, M., and Fukumori, F. 2011. A mutation in dnaK causes stabilization of the heat shock sigma factor _32, accumulation of heat shock proteins and increase in toluene-resistance in Pseudomonas putida. En-viron.microbiol. 13(8): 2007-2017.doi:10.1111/j.1462-2920.2010.02344.x.PMID:20880327.
    • (2011) En-Viron.Microbiol , vol.13 , Issue.8 , pp. 2007-2017
    • Kobayashi, Y.1    Ohtsu, I.2    Fujimura, M.3    Fukumori, F.4
  • 33
    • 0037701540 scopus 로고    scopus 로고
    • Identification of pyrene-induced proteins in Mycobacterium sp. Strain 6PY1: Evidence for two ring-hydroxylating dioxygenases
    • PMID:12813077
    • Krivobok, S., Kuony, S., Meyer, C., Louwagie, M., Willison, J.C., and Jouanneau, Y. 2003. Identification of pyrene-induced proteins in Mycobacterium sp. strain 6PY1: evidence for two ring-hydroxylating dioxygenases. J. Bacteriol. 185(13): 3828-3841.doi:10.1128/JB.185.13.3828-3841.2003.PMID:12813077.
    • (2003) J. Bacteriol , vol.185 , Issue.13 , pp. 3828-3841
    • Krivobok, S.1    Kuony, S.2    Meyer, C.3    Louwagie, M.4    Willison, J.C.5    Jouanneau, Y.6
  • 34
    • 17444397489 scopus 로고    scopus 로고
    • Web-type evolution of Rhodococcus gene clusters associated with utilization of naphthalene
    • PMID:15811998
    • Kulakov, L.A., Chen, S.C., Allen, C.C.R., and Larkin, M.J. 2005. Web-type evolution of Rhodococcus gene clusters associated with utilization of naphthalene. Appl. Environ.microbiol. 71(4): 1754-1764.doi:10.1128/AEM.71.4.1754-1764.2005.PMID:15811998.
    • (2005) Appl. Environ.Microbiol , vol.71 , Issue.4 , pp. 1754-1764
    • Kulakov, L.A.1    Chen, S.C.2    Allen, C.3    Larkin, M.J.4
  • 35
    • 20444371027 scopus 로고    scopus 로고
    • Biodegradation and Rhodococcus — masters of catabolic versatility
    • PMID:15961029
    • Larkin, M.J., Kulakov, L.A., and Allen, C.C.R. 2005. Biodegradation and Rhodococcus — masters of catabolic versatility. Curr. Opin. Biotechnol. 16(3): 282-290.doi:10.1016/j.copbio.2005.04.007.PMID:15961029.
    • (2005) Curr. Opin. Biotechnol , vol.16 , Issue.3 , pp. 282-290
    • Larkin, M.J.1    Kulakov, L.A.2    Allen, C.3
  • 36
    • 0042922729 scopus 로고    scopus 로고
    • Progress on the genetics of the N2-fixing actinorhizal symbiont Frankia
    • Lavire, C., and Cournoyer, B. 2003. Progress on the genetics of the N2-fixing actinorhizal symbiont Frankia. Plant Soil, 254(1): 125-137.doi:10.1023/A:1024915300030.
    • (2003) Plant Soil , vol.254 , Issue.1 , pp. 125-137
    • Lavire, C.1    Cournoyer, B.2
  • 37
    • 77957325754 scopus 로고    scopus 로고
    • Field performance of alder-Frankia symbionts for the reclamation of oil sands sites
    • Lefrancois, E., Quoreshi, A., Khasa, D., Fung, M., Whyte, L.G., Roy, S., et al. 2010. Field performance of alder-Frankia symbionts for the reclamation of oil sands sites. Appl. Soil Ecol. 46(2): 183-191.doi:10.1016/j.apsoil.2010.08.010.
    • (2010) Appl. Soil Ecol , vol.46 , Issue.2 , pp. 183-191
    • Lefrancois, E.1    Quoreshi, A.2    Khasa, D.3    Fung, M.4    Whyte, L.G.5    Roy, S.6
  • 38
    • 38549119467 scopus 로고    scopus 로고
    • Chaperones in control of protein disaggregation
    • PMID:18216875
    • Liberek, K., Lewandowska, A., and Zietkiewicz, S. 2008. Chaperones in control of protein disaggregation. EMBO J. 27(2): 328-335.doi:10.1038/sj.emboj.7601970.PMID:18216875.
    • (2008) EMBO J , vol.27 , Issue.2 , pp. 328-335
    • Liberek, K.1    Lewandowska, A.2    Zietkiewicz, S.3
  • 39
    • 84862794741 scopus 로고    scopus 로고
    • Characterization of Gordonia sp. Strain CC-NAPH129-6 capable of naphthalene degradation.Microbiol
    • PMID:22240034
    • Lin, C.L., Shen, F.T., Tan, C.C., Huang, C.C., Chen, B.Y., Arun, A.B., et al. 2012. Characterization of Gordonia sp. strain CC-NAPH129-6 capable of naphthalene degradation.microbiol. Res. 167(7): 395-404.doi:10.1016/j.micres.2011.12.002.PMID:22240034.
    • (2012) Res , vol.167 , Issue.7 , pp. 395-404
    • Lin, C.L.1    Shen, F.T.2    Tan, C.C.3    Huang, C.C.4    Chen, B.Y.5    Arun, A.B.6
  • 40
    • 84998693015 scopus 로고    scopus 로고
    • Draft genome sequence of Frankia sp. Strain CcI6, a salt-tolerant nitrogen-fixing actinobacterium isolated from the root nodule of Casuarina cunninghamiana
    • PMID:24435877
    • Mansour, S.R., Oshone, R., Hurst, S.G., IV, Morris, K., Thomas, W.K., and Tisa, L.S. 2014. Draft genome sequence of Frankia sp. strain CcI6, a salt-tolerant nitrogen-fixing actinobacterium isolated from the root nodule of Casuarina cunninghamiana. Genome Announc. 2(1): e01205-13.doi:10.1128/genomeA.01205-13.PMID:24435877.
    • (2014) Genome Announc , vol.2 , Issue.1 , pp. 1205-1213
    • Mansour, S.R.1    Oshone, R.2    Hurst, S.G.3    Morris, K.4    Thomas, W.K.5    Tisa, L.S.6
  • 42
    • 0026743341 scopus 로고
    • The electron-transport proteins of hydroxylating bacterial dioxygenases
    • PMID:1444257
    • Mason, J.R., and Cammack, R. 1992. The electron-transport proteins of hydroxylating bacterial dioxygenases. Annu. Rev.microbiol. 46: 277-305.doi:10.1146/annurev.mi.46.100192.001425.PMID:1444257.
    • (1992) Annu. Rev.Microbiol , vol.46 , pp. 277-305
    • Mason, J.R.1    Cammack, R.2
  • 43
    • 79960910970 scopus 로고    scopus 로고
    • Bioremediation approaches for organic pollutants: A critical perspective
    • PMID:21722961
    • Megharaj, M., Ramakrishnan, B., Venkateswarlu, K., Sethunathan, N., and Naidu, R. 2011. Bioremediation approaches for organic pollutants: a critical perspective. Environ. Int. 37(8): 1362-1375.doi:10.1016/j.envint.2011.06.003.PMID:21722961.
    • (2011) Environ. Int , vol.37 , Issue.8 , pp. 1362-1375
    • Megharaj, M.1    Ramakrishnan, B.2    Venkateswarlu, K.3    Sethunathan, N.4    Naidu, R.5
  • 44
    • 57349147125 scopus 로고    scopus 로고
    • Nitric oxide and oxygen regulate truncated hemoglobin gene expression in Frankia strain CcI3
    • PMID:18820019
    • Niemann, J., and Tisa, L.S. 2008. Nitric oxide and oxygen regulate truncated hemoglobin gene expression in Frankia strain CcI3. J. Bacteriol. 190(23): 7864-7867.doi:10.1128/JB.01100-08.PMID:18820019.
    • (2008) J. Bacteriol , vol.190 , Issue.23 , pp. 7864-7867
    • Niemann, J.1    Tisa, L.S.2
  • 45
    • 33845974881 scopus 로고    scopus 로고
    • Genome characteristics of facultatively symbiotic Frankia sp. Strains reflect host range and host plant biogeography
    • PMID:17151343
    • Normand, P., Lapierre, P., Tisa, L.S., Gogarten, J.P., Alloisio, N., Bagnarol, E., et al. 2007. Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography. Genome Res. 17(1): 7-15.doi:10.1101/gr.5798407.PMID:17151343.
    • (2007) Genome Res , vol.17 , Issue.1 , pp. 7-15
    • Normand, P.1    Lapierre, P.2    Tisa, L.S.3    Gogarten, J.P.4    Alloisio, N.5    Bagnarol, E.6
  • 46
    • 84997832040 scopus 로고    scopus 로고
    • Draft genome sequence of Frankia sp. Strain BMG5.12, a nitrogenfixing actinobacterium isolated from Tunisian soils
    • PMID:23846272
    • Nouioui, I., Beauchemin, N., Cantor, M.N., Chen, A., Detter, J.C., Furnholm, T., et al. 2013. Draft genome sequence of Frankia sp. strain BMG5.12, a nitrogenfixing actinobacterium isolated from Tunisian soils. Genome Announc. 1(4): e00468-13.doi:10.1128/genomeA.00468-13.PMID:23846272.
    • (2013) Genome Announc , vol.1 , Issue.4 , pp. 468-473
    • Nouioui, I.1    Beauchemin, N.2    Cantor, M.N.3    Chen, A.4    Detter, J.C.5    Furnholm, T.6
  • 47
    • 2442593799 scopus 로고    scopus 로고
    • Survival of naphthalene-degrading Pseudomonas putida NCIB 9816-4 in naphthaleneamended soils: Toxicity of naphthalene and its metabolites
    • PMID:12928756
    • Park, W., Jeon, C.O., Cadillo, H., DeRito, C., and Madsen, E.L. 2004. Survival of naphthalene-degrading Pseudomonas putida NCIB 9816-4 in naphthaleneamended soils: toxicity of naphthalene and its metabolites. Appl.microbiol. Biotechnol. 64(3): 429-435.doi:10.1007/s00253-003-1420-6.PMID:12928756.
    • (2004) Appl.Microbiol. Biotechnol , vol.64 , Issue.3 , pp. 429-435
    • Park, W.1    Jeon, C.O.2    Cadillo, H.3    Derito, C.4    Madsen, E.L.5
  • 48
    • 78249284328 scopus 로고    scopus 로고
    • Auxin carriers localization drives auxin accumulation in plant cells infected by Frankia in Casuarina glauca actinorhizal nodules
    • PMID:20826704
    • Perrine-Walker, F, Doumas, P., Lucas, M., Vaissayre, V., Beauchemin, N.J., Band, L.R., et al. 2010. Auxin carriers localization drives auxin accumulation in plant cells infected by Frankia in Casuarina glauca actinorhizal nodules. Plant Physiol. 154(3): 1372-1380.doi:10.1104/pp.110.163394.PMID:20826704.
    • (2010) Plant Physiol , vol.154 , Issue.3 , pp. 1372-1380
    • Perrine-Walker, F.1    Doumas, P.2    Lucas, M.3    Vaissayre, V.4    Beauchemin, N.J.5    Band, L.R.6
  • 49
    • 84855849554 scopus 로고    scopus 로고
    • Genome sequence of “Candidatus Frankia datiscae” Dg1, the uncultured microsymbiont from nitrogen-fixing root nodules of the dicot Datisca glomerata
    • PMID:22123767
    • Persson, T., Benson, D.R., Normand, P., Vanden Heuvel, B., Pujic, P., Chertkov, O., et al. 2011. Genome sequence of “Candidatus Frankia datiscae” Dg1, the uncultured microsymbiont from nitrogen-fixing root nodules of the dicot Datisca glomerata. J. Bacteriol. 193(24): 7017-7018.doi:10.1128/JB.06208-11.PMID:22123767.
    • (2011) J. Bacteriol , vol.193 , Issue.24 , pp. 7017-7018
    • Persson, T.1    Benson, D.R.2    Normand, P.3    Vanden Heuvel, B.4    Pujic, P.5    Chertkov, O.6
  • 50
    • 35448975374 scopus 로고    scopus 로고
    • Naphthalene metabolism and growth inhibition by naphthalene in Polaromonas naphthalenivorans strain
    • PMID:17975081
    • Pumphrey, G.M., and Madsen, E.L. 2007. Naphthalene metabolism and growth inhibition by naphthalene in Polaromonas naphthalenivorans strain CJ2.microbiology, 153: 3730-3738.doi:10.1099/mic.0.2007/010728-0.PMID:17975081.
    • (2007) Cj2.Microbiology , vol.153 , pp. 3730-3738
    • Pumphrey, G.M.1    Madsen, E.L.2
  • 52
    • 84903592994 scopus 로고    scopus 로고
    • Degradation of atrazine by Frankia alni ACN14a: Gene regulation, dealkylation, and dechlorination
    • PMID:24676750
    • Rehan, M., Kluge, M., Franzle, S., Kellner, H., Ullrich, R., and Hofrichter, M. 2014. Degradation of atrazine by Frankia alni ACN14a: gene regulation, dealkylation, and dechlorination. Appl.microbiol. Biotechnol. 98(13): 6125-6135.doi:10.1007/s00253-014-5665-z.PMID:24676750.
    • (2014) Appl.Microbiol. Biotechnol , vol.98 , Issue.13 , pp. 6125-6135
    • Rehan, M.1    Kluge, M.2    Franzle, S.3    Kellner, H.4    Ullrich, R.5    Hofrichter, M.6
  • 53
    • 8144225859 scopus 로고    scopus 로고
    • Molecular diversity of Frankia in root nodules of Alnus incana grown with inoculum from polluted urban soils
    • PMID:19712365
    • Ridgway, K.P., Marland, L.A., Harrison, A.F., Wright, J., Young, J.P.W., and Fitter, A.H. 2004. Molecular diversity of Frankia in root nodules of Alnus incana grown with inoculum from polluted urban soils. FEMS Microbiol. Ecol. 50(3): 255-263.doi:10.1016/j.femsec.2004.07.002.PMID:19712365.
    • (2004) FEMS Microbiol. Ecol , vol.50 , Issue.3 , pp. 255-263
    • Ridgway, K.P.1    Marland, L.A.2    Harrison, A.F.3    Wright, J.4    Young, J.5    Fitter, A.H.6
  • 54
    • 21144454731 scopus 로고    scopus 로고
    • Phytoremediation of heavy metal and PAH-contaminated brownfield sites
    • Roy, S., Labelle, S., Mehta, P., Mihoc, A., Fortin, N., Masson, C., et al. 2005. Phytoremediation of heavy metal and PAH-contaminated brownfield sites. Plant Soil, 272(1-2): 277-290.doi:10.1007/s11104-004-5295-9.
    • (2005) Plant Soil , vol.272 , Issue.1-2 , pp. 277-290
    • Roy, S.1    Labelle, S.2    Mehta, P.3    Mihoc, A.4    Fortin, N.5    Masson, C.6
  • 55
    • 34547918000 scopus 로고    scopus 로고
    • Combining alders, frankiae, and mycorrhizae for the revegetation and remediation of contaminated ecosystems
    • Roy, S., Khasa, D.P., and Greer, C.W. 2007. Combining alders, frankiae, and mycorrhizae for the revegetation and remediation of contaminated ecosystems. Can. J. Bot. 85(3): 237-251.doi:10.1139/B07-017.
    • (2007) Can. J. Bot , vol.85 , Issue.3 , pp. 237-251
    • Roy, S.1    Khasa, D.P.2    Greer, C.W.3
  • 56
    • 0036605098 scopus 로고    scopus 로고
    • Polycyclic aromatic hydrocarbons: Environmental pollution and bioremediation
    • PMID:12007492
    • Samanta, S.K., Singh, O.V., and Jain, R.K. 2002. Polycyclic aromatic hydrocarbons: environmental pollution and bioremediation. Trends Biotechnol. 20(6): 243-248.doi:10.1016/S0167-7799(02)01943-1.PMID:12007492.
    • (2002) Trends Biotechnol , vol.20 , Issue.6 , pp. 243-248
    • Samanta, S.K.1    Singh, O.V.2    Jain, R.K.3
  • 57
    • 44949231424 scopus 로고    scopus 로고
    • Analyzing real-time PCR data by the comparative C-T method
    • PMID:18546601
    • Schmittgen, T.D., and Livak, K.J. 2008. Analyzing real-time PCR data by the comparative C-T method. Nat. Protoc. 3(6): 1101-1108.doi:10.1038/nprot.2008.73.PMID:18546601.
    • (2008) Nat. Protoc , vol.3 , Issue.6 , pp. 1101-1108
    • Schmittgen, T.D.1    Livak, K.J.2
  • 58
    • 27844558011 scopus 로고    scopus 로고
    • Advances in actinorhizal symbiosis: Host plant-Frankia interactions, biology, and applications in arid land reclamation. A review
    • Schwencke, J., and Caru, M. 2001. Advances in actinorhizal symbiosis: Host plant-Frankia interactions, biology, and applications in arid land reclamation. A review. Arid Land Res. Manage. 15(4): 285-327.doi:10.1080/153249801753127615.
    • (2001) Arid Land Res. Manage , vol.15 , Issue.4 , pp. 285-327
    • Schwencke, J.1    Caru, M.2
  • 59
    • 24344489015 scopus 로고    scopus 로고
    • Proteomic analysis reveals the participation of energy-and stressrelated proteins in the response of Pseudomonas putida DOT-T1E to toluene
    • PMID: 16109935
    • Segura, A., Godoy, P., van Dillewijn, P., Hurtado, A., Arroyo, N., Santacruz, S., et al. 2005. Proteomic analysis reveals the participation of energy-and stressrelated proteins in the response of Pseudomonas putida DOT-T1E to toluene. J. Bacteriol. 187(17): 5937-5945.doi:10.1128/JB.187.17.5937-5945.2005.PMID:16109935.
    • (2005) J. Bacteriol , vol.187 , Issue.17 , pp. 5937-5945
    • Segura, A.1    Godoy, P.2    Van Dillewijn, P.3    Hurtado, A.4    Arroyo, N.5    Santacruz, S.6
  • 60
    • 84887227095 scopus 로고    scopus 로고
    • Draft Genome sequence of Frankia sp. Strain QA3, a nitrogen-fixing actinobacterium isolated from the root nodule of Alnus nitida
    • PMID:23516220
    • Sen, A., Beauchemin, N., Bruce, B., Chain, P., Chen, A., Walston Davenport, K., et al. 2013. Draft Genome sequence of Frankia sp. strain QA3, a nitrogen-fixing actinobacterium isolated from the root nodule of Alnus nitida. Genome Announc. 1(2): e00103-13.doi:10.1128/genomeA.00103-13.PMID:23516220.
    • (2013) Genome Announc , vol.1 , Issue.2 , pp. 103-113
    • Sen, A.1    Beauchemin, N.2    Bruce, B.3    Chain, P.4    Chen, A.5    Walston Davenport, K.6
  • 61
    • 33750987058 scopus 로고    scopus 로고
    • Phenanthrene degradation in Arthrobacter sp. P1[hpyhen]1: Initial 1,2-, 3,4-and 9,10-dioxygenation, and meta-and ortho-cleavages of naphthalene-1,2-diol after its formation from naphthalene-1,2-dicarboxylic acid and hydroxyl naphthoic acids
    • PMID: 16777186
    • Seo, J.S., Keum, Y.S., Hu, Y.T., Lee, S.E., and Li, Q.X. 2006. Phenanthrene degradation in Arthrobacter sp. P1[hpyhen]1: initial 1,2-, 3,4-and 9,10-dioxygenation, and meta-and ortho-cleavages of naphthalene-1,2-diol after its formation from naphthalene-1,2-dicarboxylic acid and hydroxyl naphthoic acids. Chemosphere, 65(11): 2388-2394.doi:10.1016/j.chemosphere.2006.04.067.PMID:16777186.
    • (2006) Chemosphere , vol.65 , Issue.11 , pp. 2388-2394
    • Seo, J.S.1    Keum, Y.S.2    Hu, Y.T.3    Lee, S.E.4    Li, Q.X.5
  • 62
    • 79960706901 scopus 로고    scopus 로고
    • Flavonoids biotransformation by bacterial non-heme dioxygenases, biphenyl and naphthalene dioxygenase
    • PMID:21626021
    • Seo, J., Kang, S.I., Kim, M., Han, J., and Hur, H.G. 2011. Flavonoids biotransformation by bacterial non-heme dioxygenases, biphenyl and naphthalene dioxygenase. Appl.microbiol. Biotechnol. 91(2): 219-228.doi:10.1007/s00253-011-3334-z.PMID:21626021.
    • (2011) Appl.Microbiol. Biotechnol , vol.91 , Issue.2 , pp. 219-228
    • Seo, J.1    Kang, S.I.2    Kim, M.3    Han, J.4    Hur, H.G.5
  • 63
    • 33645801411 scopus 로고    scopus 로고
    • A proteomic approach towards the analysis of salt tolerance in Rhizobium etli and Sinorhizobium meliloti strains
    • PMID:16604415
    • Shamseldin, A., Nyalwidhe, J., and Werner, D. 2006. A proteomic approach towards the analysis of salt tolerance in Rhizobium etli and Sinorhizobium meliloti strains. Curr.microbiol. 52(5): 333-339.doi:10.1007/s00284-005-6472-7.PMID:16604415.
    • (2006) Curr.Microbiol , vol.52 , Issue.5 , pp. 333-339
    • Shamseldin, A.1    Nyalwidhe, J.2    Werner, D.3
  • 65
    • 0037201961 scopus 로고    scopus 로고
    • Naphthalene toxicity and antioxidant nutrients
    • PMID: 12324202
    • Stohs, S.J., Ohia, S., and Bagchi, D. 2002. Naphthalene toxicity and antioxidant nutrients. Toxicology, 180(1): 97-105.doi:10.1016/S0300-483X(02)00384-0.PMID:12324202.
    • (2002) Toxicology , vol.180 , Issue.1 , pp. 97-105
    • Stohs, S.J.1    Ohia, S.2    Bagchi, D.3
  • 66
    • 33751565299 scopus 로고    scopus 로고
    • GroES/GroEL and DnaK/DnaJ have distinct roles in stress responses and during cell cycle progression in Caulobacter crescentus
    • PMID:16980445
    • Susin, M.F., Baldini, R.L., Gueiros, F., and Gomes, S.L. 2006. GroES/GroEL and DnaK/DnaJ have distinct roles in stress responses and during cell cycle progression in Caulobacter crescentus. J. Bacteriol. 188(23): 8044-8053.doi:10.1128/JB.00824-06.PMID:16980445.
    • (2006) J. Bacteriol , vol.188 , Issue.23 , pp. 8044-8053
    • Susin, M.F.1    Baldini, R.L.2    Gueiros, F.3    Gomes, S.L.4
  • 67
    • 0035162592 scopus 로고    scopus 로고
    • The COG database: New developments in phylogenetic classification of proteins from complete genomes
    • PMID:11125040
    • Taftusov, R.L., Natale, D.A., Garkavtsev, I.V., Tatusova, T.A., Shankavaram, U.T., Rao, B.S., et al. 2001. The COG database: new developments in phylogenetic classification of proteins from complete genomes. Nucleic Acids Res. 29(1): 22-28.doi:10.1093/nar/29.1.22.PMID:11125040.
    • (2001) Nucleic Acids Res , vol.29 , Issue.1 , pp. 22-28
    • Taftusov, R.L.1    Natale, D.A.2    Garkavtsev, I.V.3    Tatusova, T.A.4    Shankavaram, U.T.5    Rao, B.S.6
  • 68
    • 0001225649 scopus 로고
    • Studies of growth and morphology of Frankia strains EAN1pec, EuI1c, CpI1, and ACN1ag
    • Tisa, L., Mcbride, M., and Ensign, J.C. 1983. Studies of growth and morphology of Frankia strains EAN1pec, EuI1c, CpI1, and ACN1ag. Can. J. Bot. 61(11): 2768-2773.doi:10.1139/b83-306.
    • (1983) Can. J. Bot , vol.61 , Issue.11 , pp. 2768-2773
    • Tisa, L.1    McBride, M.2    Ensign, J.C.3
  • 69
    • 0033495437 scopus 로고    scopus 로고
    • Antibiotic resistance patterns of Frankia strains
    • Tisa, L.S., Chval, M.S., Krumholz, G.D., and Richards, J. 1999. Antibiotic resistance patterns of Frankia strains. Can. J. Bot. 77(9): 1257-1260.doi:10.1139/b99-067.
    • (1999) Can. J. Bot , vol.77 , Issue.9 , pp. 1257-1260
    • Tisa, L.S.1    Chval, M.S.2    Krumholz, G.D.3    Richards, J.4
  • 70
    • 84887242188 scopus 로고    scopus 로고
    • What stories can the Frankia genomes start to tell us?
    • PMID:24287651
    • Tisa, L.S., Beauchemin, N., Gtari, M., Sen, A., and Wall, L.G. 2013. What stories can the Frankia genomes start to tell us? J. Biosci. 38(4): 719-726.doi:10.1007/s12038-013-9364-1.PMID:24287651.
    • (2013) J. Biosci , vol.38 , Issue.4 , pp. 719-726
    • Tisa, L.S.1    Beauchemin, N.2    Gtari, M.3    Sen, A.4    Wall, L.G.5
  • 71
    • 4644354002 scopus 로고    scopus 로고
    • Interchangeability and distinct properties of bacterial Fe-S cluster assembly systems: Functional replacement of the isc and suf operons in Escherichia coli with the nifSU-like operon from Helicobacter pylori
    • PMID:15496591
    • Tokumoto, U., Kitamura, S., Fukuyama, K., and Takahashi, Y. 2004. Interchangeability and distinct properties of bacterial Fe-S cluster assembly systems: functional replacement of the isc and suf operons in Escherichia coli with the nifSU-like operon from Helicobacter pylori. J. Biochem. 136(2): 199-209.doi:10.1093/jb/mvh104.PMID:15496591.
    • (2004) J. Biochem , vol.136 , Issue.2 , pp. 199-209
    • Tokumoto, U.1    Kitamura, S.2    Fukuyama, K.3    Takahashi, Y.4
  • 72
    • 79958290073 scopus 로고    scopus 로고
    • Significant natural product biosynthetic potential of actinorhizal symbionts of the genus Frankia, as revealed by comparative genomic and proteomic analyses
    • PMID:21498757
    • Udwary, D.W., Gontang, E.A., Jones, A.C., Jones, C.S., Schultz, A.W., and Winter, J.M.al. 2011. Significant natural product biosynthetic potential of actinorhizal symbionts of the genus Frankia, as revealed by comparative genomic and proteomic analyses. Appl. Environ.microbiol. 77(11): 3617-3625.doi:10.1128/AEM.00038-11.PMID:21498757.
    • (2011) Appl. Environ.Microbiol , vol.77 , Issue.11 , pp. 3617-3625
    • Udwary, D.W.1    Gontang, E.A.2    Jones, A.C.3    Jones, C.S.4    Schultz, A.W.5    Winter, J.6
  • 73
    • 0000759749 scopus 로고
    • In vitro growth of 5 Frankia isolates in the presence of 4 phenolic acids and juglone
    • Vogel, C.S., and Dawson, J.O. 1986. In vitro growth of 5 Frankia isolates in the presence of 4 phenolic acids and juglone. Soil Biol. Biochem. 18(2): 227-231.doi:10.1016/0038-0717(86)90032-5.
    • (1986) Soil Biol. Biochem , vol.18 , Issue.2 , pp. 227-231
    • Vogel, C.S.1    Dawson, J.O.2
  • 74
    • 84997666942 scopus 로고    scopus 로고
    • Draft genome sequence of Frankia sp. Strain BCU110501, a nitrogenfixing actinobacterium isolated from nodules of Discaria trinevis
    • PMID:23846281
    • Wall, L.G., Beauchemin, N., Cantor, M.N., Chaia, E., Chen, A., Detter, J.C., et al. 2013. Draft genome sequence of Frankia sp. strain BCU110501, a nitrogenfixing actinobacterium isolated from nodules of Discaria trinevis. Genome Announc. 1(4): e00503-13.doi:10.1128/genomeA.00503-13.PMID:23846281.
    • (2013) Genome Announc , vol.1 , Issue.4 , pp. 503-513
    • Wall, L.G.1    Beauchemin, N.2    Cantor, M.N.3    Chaia, E.4    Chen, A.5    Detter, J.C.6
  • 75
    • 0001854053 scopus 로고
    • Current and potential uses of actinorhizal plants in Europe
    • Edited by C.R. Schwintzer and J.D. Tjepkema. Academic Press, San Diego, Calif., USA
    • Wheeler, C.T., and Miller, I.M. 1990. Current and potential uses of actinorhizal plants in Europe. In The biology of Frankia and actinorhizal plants. Edited by C.R. Schwintzer and J.D. Tjepkema. Academic Press, San Diego, Calif., USA. pp. 365-389.
    • (1990) The Biology of Frankia and Actinorhizal Plants , pp. 365-389
    • Wheeler, C.T.1    Miller, I.M.2
  • 76
    • 0027338087 scopus 로고
    • Bioremediation of soil contaminated with polynuclear aromatic-hydrocarbons (PAHs)—a review
    • PMID:15091809
    • Wilson, S.C., and Jones, K.C. 1993. Bioremediation of soil contaminated with polynuclear aromatic-hydrocarbons (PAHs)—a review. Environ. Pollut. 81(3): 229-249.doi:10.1016/0269-7491(93)90206-4.PMID:15091809.
    • (1993) Environ. Pollut , vol.81 , Issue.3 , pp. 229-249
    • Wilson, S.C.1    Jones, K.C.2
  • 77
    • 0020092111 scopus 로고
    • Plasmid gene organization: Naphthalene/salicylate oxidation
    • PMID:6278499
    • Yen, K.M., and Gunsalus, I.C. 1982. Plasmid gene organization: naphthalene/salicylate oxidation. Proc. Natl. Acad. Sci. U.S.A. 79(3): 874-878.doi:10.1073/pnas.79.3.874.PMID:6278499.
    • (1982) Proc. Natl. Acad. Sci. U.S.A. , vol.79 , Issue.3 , pp. 874-878
    • Yen, K.M.1    Gunsalus, I.C.2
  • 78
    • 44649135188 scopus 로고    scopus 로고
    • Naphthalene metabolism in Nocardia otitidiscaviarum strain TSH1, a moderately thermophilic microorganism
    • PMID:18471862
    • Zeinali, M., Vossoughi, M., and Ardestani, S.K. 2008. Naphthalene metabolism in Nocardia otitidiscaviarum strain TSH1, a moderately thermophilic microorganism. Chemosphere, 72(6): 905-909.doi:10.1016/j.chemosphere.2008.03.038.PMID:18471862.
    • (2008) Chemosphere , vol.72 , Issue.6 , pp. 905-909
    • Zeinali, M.1    Vossoughi, M.2    Ardestani, S.K.3
  • 79
    • 0034932337 scopus 로고    scopus 로고
    • DNA microarray-mediated transcriptional profiling of the Escherichia coli response to hydrogen peroxide
    • PMID:11443091
    • Zheng, M., Wang, X., Templeton, L.J., Smulski, D.R., LaRossa, R.A., and Storz, G. 2001. DNA microarray-mediated transcriptional profiling of the Escherichia coli response to hydrogen peroxide. J. Bacteriol. 183(15): 4562-4570.doi:10.1128/JB.183.15.4562-4570.2001.PMID:11443091.
    • (2001) J. Bacteriol , vol.183 , Issue.15 , pp. 4562-4570
    • Zheng, M.1    Wang, X.2    Templeton, L.J.3    Smulski, D.R.4    Larossa, R.A.5    Storz, G.6
  • 80
    • 0037267668 scopus 로고    scopus 로고
    • Importance of Gram-positive naphthalene-degrading bacteria in oil-contaminated tropical marine sediments
    • PMID:12641721
    • Zhuang, W.Q., Tay, J.H., Maszenan, A.M., Krumholz, L.R., and Tay, S.T.L. 2003. Importance of Gram-positive naphthalene-degrading bacteria in oil-contaminated tropical marine sediments. Lett. Appl.microbiol. 36(4): 251-257.doi:10.1046/j.1472-765X.2003.01297.x.PMID:12641721.
    • (2003) Lett. Appl.Microbiol , vol.36 , Issue.4 , pp. 251-257
    • Zhuang, W.Q.1    Tay, J.H.2    Maszenan, A.M.3    Krumholz, L.R.4    Tay, S.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.