Naphthalene metabolism and growth inhibition by naphthalene in Polaromonas naphthalenivorans strain CJ2

Microbiology

Volumn 153, Issue 11, 2007, Pages 3730-3738

  Pumphrey, Graham M ^a   Madsen, Eugene L ^a  

^a Department of Obstetrics Gynecology   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

1,2 NAPHTHOQUINONE; CATECHOL; GENTISIC ACID; NAPHTHALENE;

ARTICLE; AUTOOXIDATION; BACTERIAL GROWTH; BACTERIAL METABOLISM; BACTERIAL STRAIN; BACTERIUM CULTURE; BACTERIUM MUTANT; CARBON SOURCE; CELL FREE SYSTEM; CELL VIABILITY; CONCENTRATION RESPONSE; CONTROLLED STUDY; CULTURE MEDIUM; ENERGY RESOURCE; ENZYME ASSAY; GAS CHROMATOGRAPHY; GRAM NEGATIVE BACTERIUM; GROWTH INHIBITION; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; METABOLITE; NONHUMAN; POLAROMONAS NAPHTHALENIVORANS; PRIORITY JOURNAL; PSEUDOMONAS PUTIDA; RALSTONIA; RESPIROMETRY; SEQUENCE HOMOLOGY; SPECIES COMPARISON;

CHROMATOGRAPHY, HIGH PRESSURE LIQUID; COMAMONADACEAE; CULTURE MEDIA; DIOXYGENASES; GAS CHROMATOGRAPHY-MASS SPECTROMETRY; GENTISATES; MUTATION; NAPHTHALENES; NAPHTHOQUINONES; OXYGEN CONSUMPTION;

POLAROMONAS NAPHTHALENIVORANS; PSEUDOMONAS PUTIDA; RALSTONIA SP.;

EID: 35448975374     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/mic.0.2007/010728-0     Document Type: Article

References (29)

1. Ahn, I. S., Ghiorse, W. C., Lion, L. W. & Shuler, M. L. (1998). Growth kinetics of Pseudomonas putida G7 on naphthalene and occurrence of naphthalene toxicity during nutrient deprivation. Biotechnol Bioeng 59, 587-594.
2. Auger, R. L., Jacobson, A. M. & Domach, M. M. (1995). Effect of nonionic surfactant addition on bacterial metabolism of naphthalene: assessment of toxicity and overflow metabolism potential. J Hazard Mater 43, 263-272.
3. Cerdan, P., Wasserfallen, A., Rekik, M., Timmis, K. N. & Harayama, S. (1994). Substrate specificity of catechol 2,3-dioxygenase encoded by TOL plasmid pWWO of Pseudomonas putida and its relationship to cell growth. J Bacteriol 176, 6074-6081.
4. Crawford, R. L., Hutton, S. W. & Chapman, P. J. (1975). Purification and properties of gentisate 1,2-dioxygenase from Moraxella osloensis. J Bacteriol 121, 794-799.
5. Davies, J. I. & Evans, W. C. (1964). Oxidative metabolism of naphthalene by soil pseudomonads. The ring-fission mechanism. Biochem J 91, 251-261.
6. Dennis, J. J. & Zylstra, G. J. (2004). Complete sequence and genetic organization of pDTG1, the 83-kilobase naphthalene degradation plasmid from Pseudomonas putida NCIB 9816-4. J Mol Biol 341, 753-768.
7. Dorn, E. & Knackmuss, H.-J. (1978). Chemical structure and biodegradability of halogenated aromatic compounds. Biochem J 174, 85-94.
8. Fuenmayor, S. L., Wild, M., Boyes, A. L. & Williams, P. A. (1998). A gene cluster encoding steps in conversion of naphthalene to gentisate in Pseudomonas sp. Strain U2. J Bacteriol 180, 2522-2530.
9. Jeon, C. O., Park, W., Padmanabhan, P., DeRito, C., Snape, J. R. & Madsen, E. L. (2003). Discovery of a bacterium, with distinctive dioxygenase, that is responsible for in situ biodegradation in contaminated sediment. Proc Natl Acad Sci U S A 100, 13591-13596.
10. Jeon, C. O., Park, M., Ro, H. S., Park, W. & Madsen, E. L. (2006). The naphthalene catabolic (nag) genes of Polaromonas naphthalenivorans CJ2: evolutionary implications for two gene clusters and novel regulatory control. Appl Environ Microbiol 72, 1086-1095.
11. Krooneman, J., Sliekers, A. O., Pedro Gomes, T. M, Forney, L. J. & Gottshal, J. C. (2000). Characterization of 3-chlorobenzoate degrading aerobic bacteria isolated under various environmental conditions. FEMS Microbiol Ecol 32, 53-59.
12. Lee, H. J., Villaume, J., Cullen, D. C., Kim, B. C. & Gu, M. B. (2003). Monitoring and classification of PAH toxicity using an immobilized bioluminescent bacteria. Biosens Bioelectron 18, 571-577.
13. Morasch, B., Annweiler, E., Warthmann, R. J. & Meckenstock, R. U. (2001). The use of a solid adsorber resin for enrichment of bacteria with toxic substrates and to identify metabolites: degradation of naphthalene, o-, and m-xylene by sulfate-reducing bacteria. J Microbiol Methods 44, 183-191.
14. Murphy, J. F. & Stone, R. W. (1955). The bacterial dissimilation of naphthalene. Can J Microbiol 1, 579-588.
15. Park W., Jeon, C. O., Cadillo, H., DeRito, C. & Madsen, E. L. (2004). Survival of naphthalene-degrading Pseudomonas putida NCIB 9816-4 in naphthalene-amended soils: toxicity of naphthalene and its metabolites. Appl Microbiol Biotechnol 64, 429-435.
16. Penning, T. M., Burczynski, M. E., Hung, C. F., McCoull, K. D., Palackal, N. T. & Tsuruda, L. S. (1999). Dihydrodiol dehydrogenases and polycyclic aromatic hydrocarbon activation: generation of reactive and redox active o-quinones. Chem Res Toxicol 12, 1-18.
17. Peters, C. A., Knightes, C. D. & Brown, D. G. (1999). Long-term composition dynamics of PAH-containing NAPLs and implications for risk assessment. Environ Sci Technol 33, 4499-4507.
18. Ramos, J. L., Duque, E., Gallegos, M. T., Godoy, P., Ramos-Gonzalez, M. I., Rojas, A., Teran, W. & Segura, A. (2002). Mechanisms of solvent tolerance in Gram-negative bacteria. Annu Rev Microbiol 56, 743-768.
19. Samanta, S. K., Singh, O. V. & Jain, R. K. (2002). Polycyclic aromatic hydrocarbons: environmental pollution and bioremediation. Trends Biotechnol 20, 243-248.
20. Schweigert, N., Zehnder, A. J. & Eggen, R. I. (2001). Chemical properties of catechols and their molecular modes of toxic action in cells, from microorganisms to mammals. Environ Microbiol 3, 81-91.
21. Sikkema, J., de Bont, J. A. & Poolman, B. (1994). Interactions of cyclic hydrocarbons with biological membranes. J Biol Chem 269, 8022-8028.
22. Sikkema, J., de Bont, J. A. & Poolman, B. (1995). Mechanisms of membrane toxicity of hydrocarbons. Microbiol Rev 59, 201-222.
23. Sota, M., Yano, H., Ono, A., Miyazaki, R., Ishii, H., Genka, H., Top, E. M. & Tsuda, M. (2006). Genomic and functional analysis of the IncP-9 naphthalene-catabolic plasmid NAH7 and its transposon Tn4655 suggests catabolic gene spread by a tyrosine recombinase. J Bacteriol 188, 4057-4067.
24. Stanier, R. Y., Palleroni, N. J. & Doudoroff, M. (1966). The aerobic pseudomonads: a taxonomic study. J Gen Microbiol 43, 159-271.
25. Xu, Y., Yan, D. Z. & Zhou, N. Y. (2006). Heterologous expression and localization of gentisate transporter Ncg12922 from Corynebacterium glutamicum ATCC 13032. Biochem Biophys Res Commun 346, 555-561.
26. Xue, W. & Warshawsky, D. (2005). Metabolic activation of polycyclic and heterocyclic aromatic hydrocarbons and DNA damage: a review. Toxicol Appl Pharmacol 206, 73-93.
27. Yen, K. M. & Gunsalus, I. C. (1982). Plasmid gene organization: naphthalene/salicylate oxidation. Proc Natl Acad Sci U S A 79, 874-878.
28. Yen, K M. & Serdar, C. M. (1988). Genetics of naphthalene catabolism in pseudomonads. Crit Rev Microbiol 15, 247-268.
29. Zhou, N. Y., Al-Dulayymi, J., Baird, M. S. & Williams, P. A. (2002). Salicylate 5-hydroxylase from Ralstonia sp. strain U2: a monooxygenase with close relationships to and shared electron transport proteins with naphthalene dioxygenase. J Bacteriol 184, 1547-1555.