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Volumn 4, Issue 3, 2015, Pages 342-349

Software-supported user cloning strategies for site-directed mutagenesis and DNA assembly

Author keywords

DNA assembly; point mutation; primer design; site directed mutagenesis; USER cloning; Web server

Indexed keywords

DNA; GREEN FLUORESCENT PROTEIN; YELLOW FLUORESCENT PROTEIN; PRIMER DNA;

EID: 84925639491     PISSN: None     EISSN: 21615063     Source Type: Journal    
DOI: 10.1021/sb500194z     Document Type: Article
Times cited : (33)

References (22)
  • 1
    • 33750975084 scopus 로고    scopus 로고
    • Advancing uracil-excision based cloning towards an ideal technique for cloning PCR fragments
    • Nour-Eldin, H. H., Hansen, B. G., Nørholm, M. H. H., Jensen, J. K., and Halkier, B. A. (2006) Advancing uracil-excision based cloning towards an ideal technique for cloning PCR fragments Nucleic Acids Res. 34, e122
    • (2006) Nucleic Acids Res. , vol.34 , pp. 122
    • Nour-Eldin, H.H.1    Hansen, B.G.2    Nørholm, M.H.H.3    Jensen, J.K.4    Halkier, B.A.5
  • 2
    • 34249854159 scopus 로고    scopus 로고
    • USER fusion: A rapid and efficient method for simultaneous fusion and cloning of multiple PCR products
    • Geu-Flores, F., Nour-Eldin, H. H., Nielsen, M. T., and Halkier, B. A. (2007) USER fusion: A rapid and efficient method for simultaneous fusion and cloning of multiple PCR products Nucleic Acids Res. 35, e55-e55
    • (2007) Nucleic Acids Res. , vol.35 , pp. 55-e55
    • Geu-Flores, F.1    Nour-Eldin, H.H.2    Nielsen, M.T.3    Halkier, B.A.4
  • 4
    • 64249142678 scopus 로고    scopus 로고
    • DNA cloning and engineering by uracil excision
    • Chapter 3, Unit 3.21
    • Bitinaite, J. and Nichols, N. M. (2009) DNA cloning and engineering by uracil excision. Curr. Protoc. Mol. Biol. Chapter 3, Unit 3.21.
    • (2009) Curr. Protoc. Mol. Biol.
    • Bitinaite, J.1    Nichols, N.M.2
  • 5
    • 84882966238 scopus 로고    scopus 로고
    • Heterologous reconstitution of the intact geodin gene cluster in Aspergillus nidulans through a simple and versatile PCR based approach
    • Nielsen, M. T., Nielsen, J. B., Anyaogu, D. C., Holm, D. K., Nielsen, K. F., Larsen, T. O., and Mortensen, U. H. (2013) Heterologous reconstitution of the intact geodin gene cluster in Aspergillus nidulans through a simple and versatile PCR based approach PLoS One 8, e72871
    • (2013) PLoS One , vol.8 , pp. 72871
    • Nielsen, M.T.1    Nielsen, J.B.2    Anyaogu, D.C.3    Holm, D.K.4    Nielsen, K.F.5    Larsen, T.O.6    Mortensen, U.H.7
  • 11
    • 0032539693 scopus 로고    scopus 로고
    • A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
    • SantaLucia, J. (1998) A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics Proc. Natl. Acad. Sci. U. S. A. 95, 1460-5
    • (1998) Proc. Natl. Acad. Sci. U. S. A. , vol.95 , pp. 1460-1465
    • Santalucia, J.1
  • 12
    • 0029973636 scopus 로고    scopus 로고
    • FACS-optimized mutants of the green fluorescent protein (GFP)
    • Cormack, B. P., Valdivia, R. H., and Falkow, S. (1996) FACS-optimized mutants of the green fluorescent protein (GFP) Gene 173, 33-8
    • (1996) Gene , vol.173 , pp. 33-38
    • Cormack, B.P.1    Valdivia, R.H.2    Falkow, S.3
  • 13
    • 30944467113 scopus 로고    scopus 로고
    • A guide to choosing fluorescent proteins
    • Shaner, N. C., Steinbach, P. A., and Tsien, R. Y. (2005) A guide to choosing fluorescent proteins Nat. Methods 2, 905-9
    • (2005) Nat. Methods , vol.2 , pp. 905-909
    • Shaner, N.C.1    Steinbach, P.A.2    Tsien, R.Y.3
  • 14
    • 0030861452 scopus 로고    scopus 로고
    • Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements
    • Lutz, R. and Bujard, H. (1997) Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements Pharmacia 25, 1203-1210
    • (1997) Pharmacia , vol.25 , pp. 1203-1210
    • Lutz, R.1    Bujard, H.2
  • 15
    • 0031746834 scopus 로고    scopus 로고
    • New unstable variants of green fluorescent protein for studies of transient gene expression in bacteria
    • Andersen, J. B., Sternberg, C., Poulsen, L. K., Bjorn, S. P., Givskov, M., and Molin, S. (1998) New unstable variants of green fluorescent protein for studies of transient gene expression in bacteria Appl. Environ. Microbiol. 64, 2240-6
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 2240-2246
    • Andersen, J.B.1    Sternberg, C.2    Poulsen, L.K.3    Bjorn, S.P.4    Givskov, M.5    Molin, S.6
  • 16
    • 77950603940 scopus 로고    scopus 로고
    • A mutant Pfu DNA polymerase designed for advanced uracil-excision DNA engineering
    • Nørholm, M. H. H. (2010) A mutant Pfu DNA polymerase designed for advanced uracil-excision DNA engineering BMC Biotechnol. 10, 21
    • (2010) BMC Biotechnol. , vol.10 , pp. 21
    • Nørholm, M.H.H.1
  • 18
    • 79955587715 scopus 로고    scopus 로고
    • Versatile enzyme expression and characterization system for Aspergillus nidulans, with the Penicillium brevicompactum polyketide synthase gene from the mycophenolic acid gene cluster as a test case
    • Hansen, B. G., Salomonsen, B., Nielsen, M. T., Nielsen, J. B., Hansen, N. B., Nielsen, K. F., Regueira, T. B., Nielsen, J., Patil, K. R., and Mortensen, U. H. (2011) Versatile enzyme expression and characterization system for Aspergillus nidulans, with the Penicillium brevicompactum polyketide synthase gene from the mycophenolic acid gene cluster as a test case Appl. Environ. Microbiol. 77, 3044-51
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 3044-3051
    • Hansen, B.G.1    Salomonsen, B.2    Nielsen, M.T.3    Nielsen, J.B.4    Hansen, N.B.5    Nielsen, K.F.6    Regueira, T.B.7    Nielsen, J.8    Patil, K.R.9    Mortensen, U.H.10
  • 19
    • 79551667941 scopus 로고    scopus 로고
    • Circular polymerase extension cloning for high-throughput cloning of complex and combinatorial DNA libraries
    • Quan, J. and Tian, J. (2011) Circular polymerase extension cloning for high-throughput cloning of complex and combinatorial DNA libraries Nat. Protoc. 6, 242-51
    • (2011) Nat. Protoc. , vol.6 , pp. 242-251
    • Quan, J.1    Tian, J.2
  • 20
    • 33847608289 scopus 로고    scopus 로고
    • Harnessing homologous recombination in vitro to generate recombinant DNA via SLIC
    • Li, M. Z. and Elledge, S. J. (2007) Harnessing homologous recombination in vitro to generate recombinant DNA via SLIC Nat. Methods 4, 251-6
    • (2007) Nat. Methods , vol.4 , pp. 251-256
    • Li, M.Z.1    Elledge, S.J.2
  • 22
    • 79951501719 scopus 로고    scopus 로고
    • DNA assembly for synthetic biology: From parts to pathways and beyond
    • Ellis, T., Adie, T., and Baldwin, G. S. (2011) DNA assembly for synthetic biology: From parts to pathways and beyond Integr. Biol. (Camb). 3, 109-18
    • (2011) Integr. Biol. (Camb). , vol.3 , pp. 109-118
    • Ellis, T.1    Adie, T.2    Baldwin, G.S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.