Delineating community outbreaks of Salmonella enterica serovar typhimurium by use of whole-genome sequencing: Insights into genomic variability within an outbreak

Journal of Clinical Microbiology

Volumn 53, Issue 4, 2015, Pages 1063-1071

  Octavia, Sophie ^a   Wang, Qinning ^b   Tanaka, Mark M ^a   Kaur, Sandeep ^a   Sintchenko, Vitali ^b,c   Lan, Ruiting ^a  

^a UNIVERSITY OF NEW SOUTH WALES   (Australia)

^b WESTMEAD HOSPITAL   (Australia)

^c University of Sydney   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATE; EPIDEMIC; GASTROENTERITIS; GENE IDENTIFICATION; GENETIC VARIABILITY; HUMAN; MOLECULAR EPIDEMIOLOGY; MOLECULAR EVOLUTION; MULTILOCUS SEQUENCE TYPING; MUTATION RATE; NEXT GENERATION SEQUENCING; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; RETROSPECTIVE STUDY; SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM; SALMONELLOSIS; SINGLE NUCLEOTIDE POLYMORPHISM; BACTERIAL GENOME; DNA SEQUENCE; GENETICS; HIGH THROUGHPUT SEQUENCING; MICROBIOLOGY; MOLECULAR TYPING; PROCEDURES; SALMONELLA ENTERICA SEROVAR TYPHIMURIUM; SALMONELLA INFECTIONS; STATISTICS AND NUMERICAL DATA;

SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM;

BACTERIAL DNA;

DISEASE OUTBREAKS; DNA, BACTERIAL; GENOME, BACTERIAL; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; MOLECULAR EPIDEMIOLOGY; MOLECULAR TYPING; POLYMORPHISM, SINGLE NUCLEOTIDE; RETROSPECTIVE STUDIES; SALMONELLA INFECTIONS; SALMONELLA TYPHIMURIUM; SEQUENCE ANALYSIS, DNA;

EID: 84925274597     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.03235-14     Document Type: Article

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