-
1
-
-
84937511219
-
Rapid and cost effective screening of breast and ovarian cancer genes using novel sequence capture method in clinical samples
-
Arvai K, Horvath P, Balla B, Tokes AM, Tobias B, Takacs I, Nagy Z, Lakatos P, Kosa JP. 2014. Rapid and cost effective screening of breast and ovarian cancer genes using novel sequence capture method in clinical samples. Fam Cancer 13:583-589.
-
(2014)
Fam Cancer
, vol.13
, pp. 583-589
-
-
Arvai, K.1
Horvath, P.2
Balla, B.3
Tokes, A.M.4
Tobias, B.5
Takacs, I.6
Nagy, Z.7
Lakatos, P.8
Kosa, J.P.9
-
2
-
-
84876064523
-
Targeted next-generation sequencing of advanced prostate cancer identifies potential therapeutic targets and disease heterogeneity
-
Beltran H, Yelensky R, Frampton GM, Park K, Downing SR, MacDonald TY, Jarosz M, Lipson D, Tagawa ST, Nanus DM, Stephens PJ, Mosquera JM, et al. 2013. Targeted next-generation sequencing of advanced prostate cancer identifies potential therapeutic targets and disease heterogeneity. Eur Urol 63:920-926.
-
(2013)
Eur Urol
, vol.63
, pp. 920-926
-
-
Beltran, H.1
Yelensky, R.2
Frampton, G.M.3
Park, K.4
Downing, S.R.5
MacDonald, T.Y.6
Jarosz, M.7
Lipson, D.8
Tagawa, S.T.9
Nanus, D.M.10
Stephens, P.J.11
Mosquera, J.M.12
-
3
-
-
84900986859
-
Novel myosin mutations for hereditary hearing loss revealed by targeted genomic capture and massively parallel sequencing
-
Brownstein Z, Abu-Rayyan A, Karfunkel-Doron D, Sirigu S, Davidov B, Shohat M, Frydman M, Houdusse A, Kanaan M, Avraham KB. 2014. Novel myosin mutations for hereditary hearing loss revealed by targeted genomic capture and massively parallel sequencing. Eur J Hum Genet 22:768-775.
-
(2014)
Eur J Hum Genet
, vol.22
, pp. 768-775
-
-
Brownstein, Z.1
Abu-Rayyan, A.2
Karfunkel-Doron, D.3
Sirigu, S.4
Davidov, B.5
Shohat, M.6
Frydman, M.7
Houdusse, A.8
Kanaan, M.9
Avraham, K.B.10
-
4
-
-
84906226271
-
Detection of mutations in myeloid malignancies through paired-sample analysis of microdroplet-PCR deep sequencing data
-
Cheng DT, Cheng J, Mitchell TN, Syed A, Zehir A, Mensah NY, Oultache A, Nafa K, Levine RL, Arcila ME, Berger MF, Hedvat CV. 2014. Detection of mutations in myeloid malignancies through paired-sample analysis of microdroplet-PCR deep sequencing data. J Mol Diagn 16:504-518.
-
(2014)
J Mol Diagn
, vol.16
, pp. 504-518
-
-
Cheng, D.T.1
Cheng, J.2
Mitchell, T.N.3
Syed, A.4
Zehir, A.5
Mensah, N.Y.6
Oultache, A.7
Nafa, K.8
Levine, R.L.9
Arcila, M.E.10
Berger, M.F.11
Hedvat, C.V.12
-
5
-
-
84867454120
-
Exome sequencing is an efficient tool for genetic screening of Charcot-Marie-Tooth disease
-
Choi BO, Koo SK, Park MH, Rhee H, Yang SJ, Choi KG, Jung SC, Kim HS, Hyun YS, Nakhro K, Lee HJ, Woo HM, et al. 2012. Exome sequencing is an efficient tool for genetic screening of Charcot-Marie-Tooth disease. Hum Mutat 33:1610-1615.
-
(2012)
Hum Mutat
, vol.33
, pp. 1610-1615
-
-
Choi, B.O.1
Koo, S.K.2
Park, M.H.3
Rhee, H.4
Yang, S.J.5
Choi, K.G.6
Jung, S.C.7
Kim, H.S.8
Hyun, Y.S.9
Nakhro, K.10
Lee, H.J.11
Woo, H.M.12
-
6
-
-
80054757012
-
Performance comparison of exome DNA sequencing technologies
-
Clark MJ, Chen R, Lam HY, Karczewski KJ, Chen R, Euskirchen G, Butte AJ, Snyder M. 2011. Performance comparison of exome DNA sequencing technologies. Nat Biotechnol 29:908-914.
-
(2011)
Nat Biotechnol
, vol.29
, pp. 908-914
-
-
Clark, M.J.1
Chen, R.2
Lam, H.Y.3
Karczewski, K.J.4
Chen, R.5
Euskirchen, G.6
Butte, A.J.7
Snyder, M.8
-
7
-
-
84879042357
-
Exome sequencing of index patients with retinal dystrophies as a tool for molecular diagnosis
-
Corton M, Nishiguchi KM, Avila-Fernandez A, Nikopoulos K, Riveiro-Alvarez R, Tatu SD, Ayuso C, Rivolta C. 2013. Exome sequencing of index patients with retinal dystrophies as a tool for molecular diagnosis. PLoS One 8:e65574.
-
(2013)
PLoS One
, vol.8
, pp. e65574
-
-
Corton, M.1
Nishiguchi, K.M.2
Avila-Fernandez, A.3
Nikopoulos, K.4
Riveiro-Alvarez, R.5
Tatu, S.D.6
Ayuso, C.7
Rivolta, C.8
-
8
-
-
80053590678
-
Practical tools to implement massive parallel pyrosequencing of PCR products in next generation molecular diagnostics
-
De Leeneer K, De Schrijver J, Clement L, Baetens M, Lefever S, De Keulenaer S, Van Criekinge W, Deforce D, Van Nieuwerburgh F, Bekaert S, Pattyn F, De Wilde B et al. 2011. Practical tools to implement massive parallel pyrosequencing of PCR products in next generation molecular diagnostics. PLoS One 6:e25531.
-
(2011)
PLoS One
, vol.6
, pp. e25531
-
-
Leeneer De, K.1
Schrijver De, J.2
Clement, L.3
Baetens, M.4
Lefever, S.5
Keulenaer De, S.6
Van Criekinge, W.7
Deforce, D.8
Nieuwerburgh Van, F.9
Bekaert, S.10
Pattyn, F.11
De Wilde, B.12
-
9
-
-
84901978636
-
Target enrichment using parallel nanoliter quantitative PCR amplification
-
De Wilde B, Lefever S, Dong W, Dunne J, Husain S, Derveaux S, Hellemans J, Vandesompele J. 2014. Target enrichment using parallel nanoliter quantitative PCR amplification. BMC Genomics 15:184.
-
(2014)
BMC Genomics
, vol.15
, pp. 184
-
-
Wilde De, B.1
Lefever, S.2
Dong, W.3
Dunne, J.4
Husain, S.5
Derveaux, S.6
Hellemans, J.7
Vandesompele, J.8
-
10
-
-
84938513618
-
The impact of reporting incidental findings from exome and whole-genome sequencing: predicted frequencies based on modeling
-
Ding LE, Burnett L, Chesher D. 2014. The impact of reporting incidental findings from exome and whole-genome sequencing: predicted frequencies based on modeling. Genet Med. (doi: 10.1038/gim.2014.94)
-
(2014)
Genet Med
-
-
Ding, L.E.1
Burnett, L.2
Chesher, D.3
-
11
-
-
84904465224
-
Genome sequencing identifies major causes of severe intellectual disability
-
Gilissen C, Hehir-Kwa JY, Thung DT, van de Vorst M, van Bon BW, Willemsen MH, Kwint M, Janssen IM, Hoischen A, Schenck A, Leach R, Klein R, et al. 2014. Genome sequencing identifies major causes of severe intellectual disability. Nature 511:344-347.
-
(2014)
Nature
, vol.511
, pp. 344-347
-
-
Gilissen, C.1
Hehir-Kwa, J.Y.2
Thung, D.T.3
van de Vorst, M.4
van Bon, B.W.5
Willemsen, M.H.6
Kwint, M.7
Janssen, I.M.8
Hoischen, A.9
Schenck, A.10
Leach, R.11
Klein, R.12
-
12
-
-
84899642355
-
Detecting genetic variations in hereditary retinal dystrophies with next-generation sequencing technology
-
Jin X, Qu LH, Meng XH, Xu HW, Yin ZQ. 2014. Detecting genetic variations in hereditary retinal dystrophies with next-generation sequencing technology. Mol Vis 20:553-560.
-
(2014)
Mol Vis
, vol.20
, pp. 553-560
-
-
Jin, X.1
Qu, L.H.2
Meng, X.H.3
Xu, H.W.4
Yin, Z.Q.5
-
13
-
-
79959353421
-
Detection and quantification of rare mutations with massively parallel sequencing
-
Kinde I, Wu J, Papadopoulos N, Kinzler KW, Vogelstein B. 2011. Detection and quantification of rare mutations with massively parallel sequencing. Proc Natl Acad Sci USA 108:9530-9535.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 9530-9535
-
-
Kinde, I.1
Wu, J.2
Papadopoulos, N.3
Kinzler, K.W.4
Vogelstein, B.5
-
14
-
-
84871455595
-
Genotyping of fanconi anemia patients by whole exome sequencing: advantages and challenges
-
Knies K, Schuster B, Ameziane N, Rooimans M, Bettecken T, de Winter J, Schindler D. 2012. Genotyping of fanconi anemia patients by whole exome sequencing: advantages and challenges. PLoS One 7:e52648.
-
(2012)
PLoS One
, vol.7
, pp. e52648
-
-
Knies, K.1
Schuster, B.2
Ameziane, N.3
Rooimans, M.4
Bettecken, T.5
de Winter, J.6
Schindler, D.7
-
15
-
-
67649580757
-
MoDIL: detecting small indels from clone-end sequencing with mixtures of distributions
-
Lee S, Hormozdiari F, Alkan C, Brudno M. 2009. MoDIL: detecting small indels from clone-end sequencing with mixtures of distributions. Nat Methods 6:473-474.
-
(2009)
Nat Methods
, vol.6
, pp. 473-474
-
-
Lee, S.1
Hormozdiari, F.2
Alkan, C.3
Brudno, M.4
-
16
-
-
84862777457
-
Applications of targeted gene capture and next-generation sequencing technologies in studies of human deafness and other genetic disabilities
-
Lin X, Tang W, Ahmad S, Lu J, Colby CC, Zhu J, Yu Q. 2012. Applications of targeted gene capture and next-generation sequencing technologies in studies of human deafness and other genetic disabilities. Hear Res 288:67-76.
-
(2012)
Hear Res
, vol.288
, pp. 67-76
-
-
Lin, X.1
Tang, W.2
Ahmad, S.3
Lu, J.4
Colby, C.C.5
Zhu, J.6
Yu, Q.7
-
17
-
-
84885738492
-
Exome sequencing resolves apparent incidental findings and reveals further complexity of SH3TC2 variant alleles causing Charcot-Marie-Tooth neuropathy
-
Lupski JR, Gonzaga-Jauregui C, Yang Y, Bainbridge MN, Jhangiani S, Buhay CJ, Kovar CL, Wang M, Hawes AC, Reid JG, Eng C, Muzny DM, et al. 2013. Exome sequencing resolves apparent incidental findings and reveals further complexity of SH3TC2 variant alleles causing Charcot-Marie-Tooth neuropathy. Genome Med 5:57.
-
(2013)
Genome Med
, vol.5
, pp. 57
-
-
Lupski, J.R.1
Gonzaga-Jauregui, C.2
Yang, Y.3
Bainbridge, M.N.4
Jhangiani, S.5
Buhay, C.J.6
Kovar, C.L.7
Wang, M.8
Hawes, A.C.9
Reid, J.G.10
Eng, C.11
Muzny, D.M.12
-
18
-
-
77449121614
-
Target-enrichment strategies for next-generation sequencing
-
Mamanova L, Coffey AJ, Scott CE, Kozarewa I, Turner EH, Kumar A, Howard E, Shendure J, Turner DJ. 2010. Target-enrichment strategies for next-generation sequencing. Nat Methods 7:111-118.
-
(2010)
Nat Methods
, vol.7
, pp. 111-118
-
-
Mamanova, L.1
Coffey, A.J.2
Scott, C.E.3
Kozarewa, I.4
Turner, E.H.5
Kumar, A.6
Howard, E.7
Shendure, J.8
Turner, D.J.9
-
19
-
-
77952388289
-
The next generation becomes the now generation
-
Martinez DA, Nelson MA. 2010. The next generation becomes the now generation. PLoS Genet 6:e1000906.
-
(2010)
PLoS Genet
, vol.6
, pp. e1000906
-
-
Martinez, D.A.1
Nelson, M.A.2
-
20
-
-
84555187724
-
Targeted enrichment of genomic DNA regions for next-generation sequencing
-
Mertes F, Elsharawy A, Sauer S, van Helvoort JM, van der Zaag PJ, Franke A, Nilsson M, Lehrach H, Brookes AJ. 2011. Targeted enrichment of genomic DNA regions for next-generation sequencing. Brief Funct Genomics 10:374-386.
-
(2011)
Brief Funct Genomics
, vol.10
, pp. 374-386
-
-
Mertes, F.1
Elsharawy, A.2
Sauer, S.3
van Helvoort, J.M.4
van der Zaag, P.J.5
Franke, A.6
Nilsson, M.7
Lehrach, H.8
Brookes, A.J.9
-
21
-
-
80455126001
-
Evaluation of genomic high-throughput sequencing data generated on Illumina HiSeq and genome analyzer systems
-
Minoche AE, Dohm JC, Himmelbauer H. 2011. Evaluation of genomic high-throughput sequencing data generated on Illumina HiSeq and genome analyzer systems. Genome Biol 12:R112.
-
(2011)
Genome Biol
, vol.12
, pp. R112
-
-
Minoche, A.E.1
Dohm, J.C.2
Himmelbauer, H.3
-
22
-
-
84883190490
-
Targeted sequence capture and GS-FLX Titanium sequencing of 23 hypertrophic and dilated cardiomyopathy genes: implementation into diagnostics
-
Mook OR, Haagmans MA, Soucy JF, van de Meerakker JB, Baas F, Jakobs ME, Hofman N, Christiaans I, Lekanne Deprez RH, Mannens MM. 2013. Targeted sequence capture and GS-FLX Titanium sequencing of 23 hypertrophic and dilated cardiomyopathy genes: implementation into diagnostics. J Med Genet 50:614-626.
-
(2013)
J Med Genet
, vol.50
, pp. 614-626
-
-
Mook, O.R.1
Haagmans, M.A.2
Soucy, J.F.3
van de Meerakker, J.B.4
Baas, F.5
Jakobs, M.E.6
Hofman, N.7
Christiaans, I.8
Lekanne Deprez, R.H.9
Mannens, M.M.10
-
23
-
-
84887472968
-
Targeted next-generation sequencing panel (ThyroSeq) for detection of mutations in thyroid cancer
-
Nikiforova MN, Wald AI, Roy S, Durso MB, Nikiforov YE. 2013. Targeted next-generation sequencing panel (ThyroSeq) for detection of mutations in thyroid cancer. J Clin Endocrinol Metab 98:E1852-E1860.
-
(2013)
J Clin Endocrinol Metab
, vol.98
, pp. E1852-E1860
-
-
Nikiforova, M.N.1
Wald, A.I.2
Roy, S.3
Durso, M.B.4
Nikiforov, Y.E.5
-
24
-
-
84885055513
-
Whole genome sequencing in patients with retinitis pigmentosa reveals pathogenic DNA structural changes and NEK2 as a new disease gene
-
Nishiguchi KM, Tearle RG, Liu YP, Oh EC, Miyake N, Benaglio P, Harper S, Koskiniemi-Kuendig H, Venturini G, Sharon D, Koenekoop RK, Nakamura M, et al. 2013. Whole genome sequencing in patients with retinitis pigmentosa reveals pathogenic DNA structural changes and NEK2 as a new disease gene. Proc Natl Acad Sci USA 110:16139-16144.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 16139-16144
-
-
Nishiguchi, K.M.1
Tearle, R.G.2
Liu, Y.P.3
Oh, E.C.4
Miyake, N.5
Benaglio, P.6
Harper, S.7
Koskiniemi-Kuendig, H.8
Venturini, G.9
Sharon, D.10
Koenekoop, R.K.11
Nakamura, M.12
-
25
-
-
84901449140
-
The landscape of genetic variation in dilated cardiomyopathy as surveyed by clinical DNA sequencing
-
Pugh TJ, Kelly MA, Gowrisankar S, Hynes E, Seidman MA, Baxter SM, Bowser M, Harrison B, Aaron D, Mahanta LM, Lakdawala NK, McDermott G, et al. 2014. The landscape of genetic variation in dilated cardiomyopathy as surveyed by clinical DNA sequencing. Genet Med 16:601-608.
-
(2014)
Genet Med
, vol.16
, pp. 601-608
-
-
Pugh, T.J.1
Kelly, M.A.2
Gowrisankar, S.3
Hynes, E.4
Seidman, M.A.5
Baxter, S.M.6
Bowser, M.7
Harrison, B.8
Aaron, D.9
Mahanta, L.M.10
Lakdawala, N.K.11
McDermott, G.12
-
27
-
-
79951809636
-
Molecular diagnosis for heterogeneous genetic diseases with targeted high-throughput DNA sequencing applied to retinitis pigmentosa
-
Simpson DA, Clark GR, Alexander S, Silvestri G, Willoughby CE. 2011. Molecular diagnosis for heterogeneous genetic diseases with targeted high-throughput DNA sequencing applied to retinitis pigmentosa. J Med Genet 48:145-151.
-
(2011)
J Med Genet
, vol.48
, pp. 145-151
-
-
Simpson, D.A.1
Clark, G.R.2
Alexander, S.3
Silvestri, G.4
Willoughby, C.E.5
-
28
-
-
84880454318
-
Performance evaluation of the next-generation sequencing approach for molecular diagnosis of hereditary hearing loss
-
Sivakumaran TA, Husami A, Kissell D, Zhang W, Keddache M, Black AP, Tinkle BT, Greinwald JH, Jr., Zhang K. 2013. Performance evaluation of the next-generation sequencing approach for molecular diagnosis of hereditary hearing loss. Otolaryngol Head Neck Surg 148:1007-1016.
-
(2013)
Otolaryngol Head Neck Surg
, vol.148
, pp. 1007-1016
-
-
Sivakumaran, T.A.1
Husami, A.2
Kissell, D.3
Zhang, W.4
Keddache, M.5
Black, A.P.6
Tinkle, B.T.7
Greinwald, J.H.8
Zhang, K.9
-
29
-
-
84905912748
-
Pathogenic variants for Mendelian and complex traits in exomes of 6,517 European and African Americans: Implications for the return of incidental results
-
NHLBI Exome Sequencing Project
-
Tabor HK, Auer PL, Jamal SM, Chong JX, Yu JH, Gordon AS, Graubert TA, O'Donnell CJ, Rich SS, Nickerson DA, NHLBI Exome Sequencing Project, Bamshad MJ. 2014. Pathogenic variants for Mendelian and complex traits in exomes of 6, 517 European and African Americans: Implications for the return of incidental results. Am J Hum Genet 95:183-193.
-
(2014)
Am J Hum Genet
, vol.95
, pp. 183-193
-
-
Tabor, H.K.1
Auer, P.L.2
Jamal, S.M.3
Chong, J.X.4
Yu, J.H.5
Gordon, A.S.6
Graubert, T.A.7
O'Donnell, C.J.8
Rich, S.S.9
Nickerson, D.A.10
Bamshad, M.J.11
-
30
-
-
84863002929
-
A low-cost exon capture method suitable for large-scale screening of genetic deafness by the massively-parallel sequencing approach
-
Tang W, Qian D, Ahmad S, Mattox D, Todd NW, Han H, Huang S, Li Y, Wang Y, Li H, Lin X. 2012. A low-cost exon capture method suitable for large-scale screening of genetic deafness by the massively-parallel sequencing approach. Genet Test Mol Biomarkers 16:536-542.
-
(2012)
Genet Test Mol Biomarkers
, vol.16
, pp. 536-542
-
-
Tang, W.1
Qian, D.2
Ahmad, S.3
Mattox, D.4
Todd, N.W.5
Han, H.6
Huang, S.7
Li, Y.8
Wang, Y.9
Li, H.10
Lin, X.11
-
31
-
-
84890219186
-
Comprehensive molecular diagnosis of 179 Leber congenital amaurosis and juvenile retinitis pigmentosa patients by targeted next generation sequencing
-
Wang X, Wang H, Sun V, Tuan HF, Keser V, Wang K, Ren H, Lopez I, Zaneveld JE, Siddiqui S, Bowles S, Khan A, et al. 2013. Comprehensive molecular diagnosis of 179 Leber congenital amaurosis and juvenile retinitis pigmentosa patients by targeted next generation sequencing. J Med Genet 50:674-688.
-
(2013)
J Med Genet
, vol.50
, pp. 674-688
-
-
Wang, X.1
Wang, H.2
Sun, V.3
Tuan, H.F.4
Keser, V.5
Wang, K.6
Ren, H.7
Lopez, I.8
Zaneveld, J.E.9
Siddiqui, S.10
Bowles, S.11
Khan, A.12
-
32
-
-
84885785987
-
Clinical whole-exome sequencing for the diagnosis of mendelian disorders
-
Yang Y, Muzny DM, Reid JG, Bainbridge MN, Willis A, Ward PA, Braxton A, Beuten J, Xia F, Niu Z, Hardison M, Person R, et al. 2013. Clinical whole-exome sequencing for the diagnosis of mendelian disorders. N Engl J Med 369:1502-1511.
-
(2013)
N Engl J Med
, vol.369
, pp. 1502-1511
-
-
Yang, Y.1
Muzny, D.M.2
Reid, J.G.3
Bainbridge, M.N.4
Willis, A.5
Ward, P.A.6
Braxton, A.7
Beuten, J.8
Xia, F.9
Niu, Z.10
Hardison, M.11
Person, R.12
-
33
-
-
84884534843
-
Molecular defects identified by whole exome sequencing in a child with Fanconi anemia
-
Zheng Z, Geng J, Yao RE, Li C, Ying D, Shen Y, Ying L, Yu Y, Fu Q. 2013. Molecular defects identified by whole exome sequencing in a child with Fanconi anemia. Gene 530:295-300.
-
(2013)
Gene
, vol.530
, pp. 295-300
-
-
Zheng, Z.1
Geng, J.2
Yao, R.E.3
Li, C.4
Ying, D.5
Shen, Y.6
Ying, L.7
Yu, Y.8
Fu, Q.9
|