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Volumn 7, Issue 12, 2012, Pages

Genotyping of Fanconi Anemia Patients by Whole Exome Sequencing: Advantages and Challenges

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA;

EID: 84871455595     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0052648     Document Type: Article
Times cited : (32)

References (26)
  • 1
    • 82255186379 scopus 로고    scopus 로고
    • Further evidence for the contribution of the RAD51C gene in hereditary breast and ovarian cancer susceptibility
    • Vuorela M, Pylkas K, Hartikainen JM, Sundfeldt K, Lindblom A, et al. (2011) Further evidence for the contribution of the RAD51C gene in hereditary breast and ovarian cancer susceptibility. Breast Cancer Res Treat 130: 1003-1010.
    • (2011) Breast Cancer Res Treat , vol.130 , pp. 1003-1010
    • Vuorela, M.1    Pylkas, K.2    Hartikainen, J.M.3    Sundfeldt, K.4    Lindblom, A.5
  • 2
    • 80053894780 scopus 로고
    • Pagon RA, Bird TD, Dolan CR, Stephens K, editors. GeneReviews. Seattle (WA)
    • Alter BP, Kupfer G (1993) Fanconi Anemia. In: Pagon RA, Bird TD, Dolan CR, Stephens K, editors. GeneReviews. Seattle (WA).
    • (1993) Fanconi Anemia
    • Alter, B.P.1    Kupfer, G.2
  • 3
    • 67650451108 scopus 로고    scopus 로고
    • Fanconi anemia and its diagnosis
    • Auerbach AD, (2009) Fanconi anemia and its diagnosis. Mutat Res 668: 4-10.
    • (2009) Mutat Res , vol.668 , pp. 4-10
    • Auerbach, A.D.1
  • 4
    • 80051590706 scopus 로고    scopus 로고
    • Pediatric leukemia predisposition syndromes: clues to understanding leukemogenesis
    • Seif AE, (2011) Pediatric leukemia predisposition syndromes: clues to understanding leukemogenesis. Cancer Genet 204: 227-244.
    • (2011) Cancer Genet , vol.204 , pp. 227-244
    • Seif, A.E.1
  • 5
    • 0037306904 scopus 로고    scopus 로고
    • Cancer incidence in persons with Fanconi anemia
    • Rosenberg PS, Greene MH, Alter BP, (2003) Cancer incidence in persons with Fanconi anemia. Blood 101: 822-826.
    • (2003) Blood , vol.101 , pp. 822-826
    • Rosenberg, P.S.1    Greene, M.H.2    Alter, B.P.3
  • 6
    • 79959635260 scopus 로고    scopus 로고
    • DNA interstrand crosslink repair and cancer
    • Deans AJ, West SC, (2011) DNA interstrand crosslink repair and cancer. Nat Rev Cancer 11: 467-480.
    • (2011) Nat Rev Cancer , vol.11 , pp. 467-480
    • Deans, A.J.1    West, S.C.2
  • 7
    • 0027861014 scopus 로고
    • Fanconi anemia diagnosis and the diepoxybutane (DEB) test
    • Auerbach AD, (1993) Fanconi anemia diagnosis and the diepoxybutane (DEB) test. Exp Hematol 21: 731-733.
    • (1993) Exp Hematol , vol.21 , pp. 731-733
    • Auerbach, A.D.1
  • 8
    • 0019378276 scopus 로고
    • Mitomycin C test for diagnostic differentiation of idiopathic aplastic anemia and Fanconi anemia
    • Cervenka J, Arthur D, Yasis C, (1981) Mitomycin C test for diagnostic differentiation of idiopathic aplastic anemia and Fanconi anemia. Pediatrics 67: 119-127.
    • (1981) Pediatrics , vol.67 , pp. 119-127
    • Cervenka, J.1    Arthur, D.2    Yasis, C.3
  • 9
    • 0013772684 scopus 로고
    • [Spontaneous chromosome aberrations in familial panmyelopathy]
    • Schroeder TM, Anschutz F, Knopp A, (1964) [Spontaneous chromosome aberrations in familial panmyelopathy]. Humangenetik 1: 194-196.
    • (1964) Humangenetik , vol.1 , pp. 194-196
    • Schroeder, T.M.1    Anschutz, F.2    Knopp, A.3
  • 10
    • 0023204590 scopus 로고
    • Confirmation of Fanconi's anemia and detection of a chromosomal aberration (1Q12-32 triplication) via BrdU/Hoechst flow cytometry
    • Schindler D, Kubbies M, Hoehn H, Schinzel A, Rabinovitch PS, (1987) Confirmation of Fanconi's anemia and detection of a chromosomal aberration (1Q12-32 triplication) via BrdU/Hoechst flow cytometry. Am J Pediatr Hematol Oncol 9: 172-177.
    • (1987) Am J Pediatr Hematol Oncol , vol.9 , pp. 172-177
    • Schindler, D.1    Kubbies, M.2    Hoehn, H.3    Schinzel, A.4    Rabinovitch, P.S.5
  • 11
    • 0028950319 scopus 로고
    • Comparative evaluation of diepoxybutane sensitivity and cell cycle blockage in the diagnosis of Fanconi anemia
    • Seyschab H, Friedl R, Sun Y, Schindler D, Hoehn H, et al. (1995) Comparative evaluation of diepoxybutane sensitivity and cell cycle blockage in the diagnosis of Fanconi anemia. Blood 85: 2233-2237.
    • (1995) Blood , vol.85 , pp. 2233-2237
    • Seyschab, H.1    Friedl, R.2    Sun, Y.3    Schindler, D.4    Hoehn, H.5
  • 12
    • 11144353924 scopus 로고    scopus 로고
    • Germline mutations in BRCA2: shared genetic susceptibility to breast cancer, early onset leukemia, and Fanconi anemia
    • Wagner JE, Tolar J, Levran O, Scholl T, Deffenbaugh A, et al. (2004) Germline mutations in BRCA2: shared genetic susceptibility to breast cancer, early onset leukemia, and Fanconi anemia. Blood 103: 3226-3229.
    • (2004) Blood , vol.103 , pp. 3226-3229
    • Wagner, J.E.1    Tolar, J.2    Levran, O.3    Scholl, T.4    Deffenbaugh, A.5
  • 13
    • 1642315917 scopus 로고    scopus 로고
    • Association of biallelic BRCA2/FANCD1 mutations with spontaneous chromosomal instability and solid tumors of childhood
    • Hirsch B, Shimamura A, Moreau L, Baldinger S, Hag-alshiekh M, et al. (2004) Association of biallelic BRCA2/FANCD1 mutations with spontaneous chromosomal instability and solid tumors of childhood. Blood 103: 2554-2559.
    • (2004) Blood , vol.103 , pp. 2554-2559
    • Hirsch, B.1    Shimamura, A.2    Moreau, L.3    Baldinger, S.4    Hag-alshiekh, M.5
  • 14
    • 77951747926 scopus 로고    scopus 로고
    • Mutation of the RAD51C gene in a Fanconi anemia-like disorder
    • Vaz F, Hanenberg H, Schuster B, Barker K, Wiek C, et al. (2010) Mutation of the RAD51C gene in a Fanconi anemia-like disorder. Nat Genet 42: 406-409.
    • (2010) Nat Genet , vol.42 , pp. 406-409
    • Vaz, F.1    Hanenberg, H.2    Schuster, B.3    Barker, K.4    Wiek, C.5
  • 15
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li H, Durbin R, (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25: 1754-1760.
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 17
    • 69949122158 scopus 로고    scopus 로고
    • VarScan: variant detection in massively parallel sequencing of individual and pooled samples
    • Koboldt DC, Chen K, Wylie T, Larson DE, McLellan MD, et al. (2009) VarScan: variant detection in massively parallel sequencing of individual and pooled samples. Bioinformatics 25: 2283-2285.
    • (2009) Bioinformatics , vol.25 , pp. 2283-2285
    • Koboldt, D.C.1    Chen, K.2    Wylie, T.3    Larson, D.E.4    McLellan, M.D.5
  • 18
    • 77956534324 scopus 로고    scopus 로고
    • ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
    • Wang K, Li M, Hakonarson H, (2010) ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Res 38: e164.
    • (2010) Nucleic Acids Res , vol.38
    • Wang, K.1    Li, M.2    Hakonarson, H.3
  • 19
    • 33749016803 scopus 로고    scopus 로고
    • Interactive visual analysis of SNP data for rapid autozygosity mapping in consanguineous families
    • Carr IM, Flintoff KJ, Taylor GR, Markham AF, Bonthron DT, (2006) Interactive visual analysis of SNP data for rapid autozygosity mapping in consanguineous families. Hum Mutat 27: 1041-1046.
    • (2006) Hum Mutat , vol.27 , pp. 1041-1046
    • Carr, I.M.1    Flintoff, K.J.2    Taylor, G.R.3    Markham, A.F.4    Bonthron, D.T.5
  • 21
    • 84871404073 scopus 로고    scopus 로고
    • Diagnosis of fanconi anemia: mutation analysis by next-generation sequencing
    • Ameziane N, Sie D, Dentro S, Ariyurek Y, Kerkhoven L, et al. (2012) Diagnosis of fanconi anemia: mutation analysis by next-generation sequencing. Anemia 2012: 132856.
    • (2012) Anemia , vol.2012 , pp. 132856
    • Ameziane, N.1    Sie, D.2    Dentro, S.3    Ariyurek, Y.4    Kerkhoven, L.5
  • 22
    • 34247576595 scopus 로고    scopus 로고
    • Hypomorphic mutations in the gene encoding a key Fanconi anemia protein, FANCD2, sustain a significant group of FA-D2 patients with severe phenotype
    • Kalb R, Neveling K, Hoehn H, Schneider H, Linka Y, et al. (2007) Hypomorphic mutations in the gene encoding a key Fanconi anemia protein, FANCD2, sustain a significant group of FA-D2 patients with severe phenotype. Am J Hum Genet 80: 895-910.
    • (2007) Am J Hum Genet , vol.80 , pp. 895-910
    • Kalb, R.1    Neveling, K.2    Hoehn, H.3    Schneider, H.4    Linka, Y.5
  • 23
  • 25
    • 53649106195 scopus 로고    scopus 로고
    • Next-generation DNA sequencing
    • Shendure J, Ji H, (2008) Next-generation DNA sequencing. Nat Biotechnol 26: 1135-1145.
    • (2008) Nat Biotechnol , vol.26 , pp. 1135-1145
    • Shendure, J.1    Ji, H.2
  • 26
    • 39649117755 scopus 로고    scopus 로고
    • The impact of next-generation sequencing technology on genetics
    • Mardis ER, (2008) The impact of next-generation sequencing technology on genetics. Trends Genet 24: 133-141.
    • (2008) Trends Genet , vol.24 , pp. 133-141
    • Mardis, E.R.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.