메뉴 건너뛰기




Volumn 22, Issue 6, 2014, Pages 768-775

Novel myosin mutations for hereditary hearing loss revealed by targeted genomic capture and massively parallel sequencing

Author keywords

consanguinity; deafness; diagnosis; exome sequencing; next generation sequencing

Indexed keywords

MICRORNA; MOLECULAR MOTOR; MYOSIN; MYOSIN VI; MYOSIN VIIA; MYOSIN XVA; UNCLASSIFIED DRUG; MYO15A PROTEIN, HUMAN; MYOSIN HEAVY CHAIN;

EID: 84900986859     PISSN: 10184813     EISSN: 14765438     Source Type: Journal    
DOI: 10.1038/ejhg.2013.232     Document Type: Article
Times cited : (44)

References (46)
  • 2
    • 78650506429 scopus 로고    scopus 로고
    • Comprehensive genetic testing for hereditary hearing loss using massively parallel sequencing
    • Shearer AE, DeLuca AP, Hildebrand MS et al: Comprehensive genetic testing for hereditary hearing loss using massively parallel sequencing. Proc Natl Acad Sci USA 2010; 107: 21104-21109.
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 21104-21109
    • Shearer, A.E.1    Deluca, A.P.2    Hildebrand, M.S.3
  • 3
    • 80052869041 scopus 로고    scopus 로고
    • Targeted genomic capture and massively parallel sequencing to identify genes for hereditary hearing loss in Middle Eastern families
    • Brownstein Z, Friedman LM, Shahin H et al: Targeted genomic capture and massively parallel sequencing to identify genes for hereditary hearing loss in Middle Eastern families. Genome Biol 2011; 12: R89.
    • (2011) Genome Biol , vol.12
    • Brownstein, Z.1    Friedman, L.M.2    Shahin, H.3
  • 4
    • 37549069575 scopus 로고    scopus 로고
    • Drawing the tree of eukaryotic life based on the analysis of 2269 manually annotated myosins from 328 species
    • Odronitz F, Kollmar M: Drawing the tree of eukaryotic life based on the analysis of 2269 manually annotated myosins from 328 species. Genome Biol 2007; 8: R196.
    • (2007) Genome Biol , vol.8
    • Odronitz, F.1    Kollmar, M.2
  • 5
    • 84863104644 scopus 로고    scopus 로고
    • The myosin superfamily at a glance
    • Hartman MA, Spudich JA: The myosin superfamily at a glance. J Cell Sci 2012; 125: 1627-1632.
    • (2012) J Cell Sci , vol.125 , pp. 1627-1632
    • Hartman, M.A.1    Spudich, J.A.2
  • 6
    • 66749156456 scopus 로고    scopus 로고
    • Linking genes underlying deafness to hair-bundle development and function
    • Petit C, Richardson GP: Linking genes underlying deafness to hair-bundle development and function. Nat Neurosci 2009; 12: 703-710.
    • (2009) Nat Neurosci , vol.12 , pp. 703-710
    • Petit, C.1    Richardson, G.P.2
  • 7
    • 0037188476 scopus 로고    scopus 로고
    • From flies' eyes to our ears: Mutations in a human class III myosin cause progressive nonsyndromic hearing loss DFNB30
    • Walsh T, Walsh V, Vreugde S et al: From flies' eyes to our ears: mutations in a human class III myosin cause progressive nonsyndromic hearing loss DFNB30. Proc Natl Acad Sci USA 2002; 99: 7518-7523.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 7518-7523
    • Walsh, T.1    Walsh, V.2    Vreugde, S.3
  • 8
    • 0034887805 scopus 로고    scopus 로고
    • MYO6, the human homologue of the gene responsible for deafness in Snell's waltzer mice, is mutated in autosomal dominant nonsyndromic hearing loss
    • Melchionda S, Ahituv N, Bisceglia L et al: MYO6, the human homologue of the gene responsible for deafness in Snell's waltzer mice, is mutated in autosomal dominant nonsyndromic hearing loss. Am J Hum Genet 2001; 69: 635-640.
    • (2001) Am J Hum Genet , vol.69 , pp. 635-640
    • Melchionda, S.1    Ahituv, N.2    Bisceglia, L.3
  • 9
    • 0037730096 scopus 로고    scopus 로고
    • Mutations of MYO6 are associated with recessive deafness, DFNB37
    • Ahmed ZM, Morell RJ, Riazuddin S et al: Mutations of MYO6 are associated with recessive deafness, DFNB37. Am J Hum Genet 2003; 72: 1315-1322.
    • (2003) Am J Hum Genet , vol.72 , pp. 1315-1322
    • Ahmed, Z.M.1    Morell, R.J.2    Riazuddin, S.3
  • 10
    • 0031278277 scopus 로고    scopus 로고
    • Autosomal dominant non-syndromic deafness caused by a mutation in the myosin VIIA gene
    • Liu XZ, Walsh J, Tamagawa Y et al: Autosomal dominant non-syndromic deafness caused by a mutation in the myosin VIIA gene. Nat Genet 1997; 17: 268-269.
    • (1997) Nat Genet , vol.17 , pp. 268-269
    • Liu, X.Z.1    Walsh, J.2    Tamagawa, Y.3
  • 11
    • 0030951102 scopus 로고    scopus 로고
    • The autosomal recessive isolated deafness, DFNB2, and the Usher 1B syndrome are allelic defects of the myosin-VIIA gene
    • Weil D, Kussel P, Blanchard S et al: The autosomal recessive isolated deafness, DFNB2, and the Usher 1B syndrome are allelic defects of the myosin-VIIA gene. Nat Genet 1997; 16: 191-193.
    • (1997) Nat Genet , vol.16 , pp. 191-193
    • Weil, D.1    Kussel, P.2    Blanchard, S.3
  • 12
    • 0032577293 scopus 로고    scopus 로고
    • Association of unconventional myosin MYO15 mutations with human nonsyndromic deafness DFNB3
    • Wang A, Liang Y, Fridell RA et al: Association of unconventional myosin MYO15 mutations with human nonsyndromic deafness DFNB3. Science 1998; 280: 1447-1451.
    • (1998) Science , vol.280 , pp. 1447-1451
    • Wang, A.1    Liang, Y.2    Fridell, R.A.3
  • 14
    • 12144286156 scopus 로고    scopus 로고
    • Nonmuscle myosin heavy-chain gene MYH14 is expressed in cochlea and mutated in patients affected by autosomal dominant hearing impairment (DFNA4)
    • Donaudy F, Snoeckx R, Pfister M et al: Nonmuscle myosin heavy-chain gene MYH14 is expressed in cochlea and mutated in patients affected by autosomal dominant hearing impairment (DFNA4). Am J Hum Genet 2004; 74: 770-776.
    • (2004) Am J Hum Genet , vol.74 , pp. 770-776
    • Donaudy, F.1    Snoeckx, R.2    Pfister, M.3
  • 15
    • 0037677643 scopus 로고    scopus 로고
    • Multiple mutations of MYO1A, a cochlear-expressed gene, in sensorineural hearing loss
    • Donaudy F, Ferrara A, Esposito L et al: Multiple mutations of MYO1A, a cochlear-expressed gene, in sensorineural hearing loss. Am J Hum Genet 2003; 72: 1571-1577.
    • (2003) Am J Hum Genet , vol.72 , pp. 1571-1577
    • Donaudy, F.1    Ferrara, A.2    Esposito, L.3
  • 17
    • 0028815440 scopus 로고
    • Defective myosin VIIA gene responsible for Usher syndrome type 1B
    • Weil D, Blanchard S, Kaplan J et al: Defective myosin VIIA gene responsible for Usher syndrome type 1B. Nature 1995; 374: 60-61.
    • (1995) Nature , vol.374 , pp. 60-61
    • Weil, D.1    Blanchard, S.2    Kaplan, J.3
  • 18
    • 1942437588 scopus 로고    scopus 로고
    • Novel association of hypertrophic cardiomyopathy, sensorineural deafness, and a mutation in unconventional myosin VI (MYO6)
    • Mohiddin SA, Ahmed ZM, Griffith AJ et al: Novel association of hypertrophic cardiomyopathy, sensorineural deafness, and a mutation in unconventional myosin VI (MYO6). J Med Genet 2004; 41: 309-314.
    • (2004) J Med Genet , vol.41 , pp. 309-314
    • Mohiddin, S.A.1    Ahmed, Z.M.2    Griffith, A.J.3
  • 19
    • 0028860302 scopus 로고
    • A type VII myosin encoded by the mouse deafness gene shaker-1
    • Gibson F, Walsh J, Mburu P et al: A type VII myosin encoded by the mouse deafness gene shaker-1. Nature 1995; 374: 62-64.
    • (1995) Nature , vol.374 , pp. 62-64
    • Gibson, F.1    Walsh, J.2    Mburu, P.3
  • 20
    • 0028803112 scopus 로고
    • The mouse Snell's waltzer deafness gene encodes an unconventional myosin required for structural integrity of inner ear hair cells
    • Avraham KB, Hasson T, Steel KP et al: The mouse Snell's waltzer deafness gene encodes an unconventional myosin required for structural integrity of inner ear hair cells. Nat Genet 1995; 11: 369-375.
    • (1995) Nat Genet , vol.11 , pp. 369-375
    • Avraham, K.B.1    Hasson, T.2    Steel, K.P.3
  • 21
    • 17644442703 scopus 로고    scopus 로고
    • Correction of deafness in shaker-2 mice by an unconventional myosin in a BAC transgene
    • Probst FJ, Fridell RA, Raphael Y et al: Correction of deafness in shaker-2 mice by an unconventional myosin in a BAC transgene. Science 1998; 280: 1444-1447.
    • (1998) Science , vol.280 , pp. 1444-1447
    • Probst, F.J.1    Fridell, R.A.2    Raphael, Y.3
  • 22
    • 77949655513 scopus 로고    scopus 로고
    • Five novel loci for inherited hearing loss mapped by SNP-based homozygosity profiles in Palestinian families
    • Shahin H, Walsh T, Rayyan AA et al: Five novel loci for inherited hearing loss mapped by SNP-based homozygosity profiles in Palestinian families. Eur J Hum Genet 2010; 18: 407-413.
    • (2010) Eur J Hum Genet , vol.18 , pp. 407-413
    • Shahin, H.1    Walsh, T.2    Rayyan, A.A.3
  • 23
    • 70349923565 scopus 로고    scopus 로고
    • Deafness genes in Israel: Implications for diagnostics in the clinic
    • Brownstein Z, Avraham KB: Deafness genes in Israel: implications for diagnostics in the clinic. Pediatr Res 2009; 66: 128-134.
    • (2009) Pediatr Res , vol.66 , pp. 128-134
    • Brownstein, Z.1    Avraham, K.B.2
  • 24
    • 77955079666 scopus 로고    scopus 로고
    • Genomic duplication and overexpression of TJP2/ZO-2 leads to altered expression of apoptosis genes in progressive nonsyndromic hearing loss DFNA51
    • Walsh T, Pierce SB, Lenz DR et al: Genomic duplication and overexpression of TJP2/ZO-2 leads to altered expression of apoptosis genes in progressive nonsyndromic hearing loss DFNA51. Am J Hum Genet 2010; 87: 101-109.
    • (2010) Am J Hum Genet , vol.87 , pp. 101-109
    • Walsh, T.1    Pierce, S.B.2    Lenz, D.R.3
  • 25
    • 79955038896 scopus 로고    scopus 로고
    • A deleterious mutation in the LOXHD1 gene causes autosomal recessive hearing loss in Ashkenazi Jews
    • Edvardson S, Jalas C, Shaag A et al: A deleterious mutation in the LOXHD1 gene causes autosomal recessive hearing loss in Ashkenazi Jews. Am J Med Genet A 2011; 155A: 1170-1172.
    • (2011) Am J Med Genet A , vol.155 A , pp. 1170-1172
    • Edvardson, S.1    Jalas, C.2    Shaag, A.3
  • 26
    • 77956099474 scopus 로고    scopus 로고
    • Nonsense mutation of the stereociliar membrane protein gene PTPRQ in human hearing loss DFNB84
    • Shahin H, Rahil M, Abu Rayan A et al: Nonsense mutation of the stereociliar membrane protein gene PTPRQ in human hearing loss DFNB84. J Med Genet 2010; 47: 643-645.
    • (2010) J Med Genet , vol.47 , pp. 643-645
    • Shahin, H.1    Rahil, M.2    Abu Rayan, A.3
  • 27
    • 77955084820 scopus 로고    scopus 로고
    • Whole exome sequencing and homozygosity mapping identify mutation in the cell polarity protein GPSM2 as the cause of nonsyndromic hearing loss DFNB82
    • Walsh T, Shahin H, Elkan-Miller T et al: Whole exome sequencing and homozygosity mapping identify mutation in the cell polarity protein GPSM2 as the cause of nonsyndromic hearing loss DFNB82. Am J Hum Genet 2010; 87: 90-94.
    • (2010) Am J Hum Genet , vol.87 , pp. 90-94
    • Walsh, T.1    Shahin, H.2    Elkan-Miller, T.3
  • 28
    • 84873329892 scopus 로고    scopus 로고
    • The LINC complex is essential for hearing
    • Horn HF, Brownstein Z, Lenz DR et al: The LINC complex is essential for hearing. J Clin Invest 2013; 123: 740-750.
    • (2013) J Clin Invest , vol.123 , pp. 740-750
    • Horn, H.F.1    Brownstein, Z.2    Lenz, D.R.3
  • 29
    • 84880509410 scopus 로고    scopus 로고
    • Cytoplasmic mislocalization of POU3F4 due to novel mutations leads to deafness in humans and mice
    • Parzefall T, Shivatzki S, Lenz DR et al: Cytoplasmic mislocalization of POU3F4 due to novel mutations leads to deafness in humans and mice. Hum Mut 2013; 34: 1102-1110.
    • (2013) Hum Mut , vol.34 , pp. 1102-1110
    • Parzefall, T.1    Shivatzki, S.2    Lenz, D.R.3
  • 30
    • 77949587649 scopus 로고    scopus 로고
    • Fast and accurate long-read alignment with Burrows-Wheeler transform
    • Li H, Durbin R: Fast and accurate long-read alignment with Burrows-Wheeler transform. Bioinformatics 2010; 26: 589-595.
    • (2010) Bioinformatics , vol.26 , pp. 589-595
    • Li, H.1    Durbin, R.2
  • 32
    • 69549116107 scopus 로고    scopus 로고
    • BreakDancer: An algorithm for high-resolution mapping of genomic structural variation
    • Chen K, Wallis JW, McLellan MD et al: BreakDancer: an algorithm for high-resolution mapping of genomic structural variation. Nat Methods 2009; 6: 677-681.
    • (2009) Nat Methods , vol.6 , pp. 677-681
    • Chen, K.1    Wallis, J.W.2    McLellan, M.D.3
  • 33
    • 77951640946 scopus 로고    scopus 로고
    • A method and server for predicting damaging missense mutations
    • Adzhubei IA, Schmidt S, Peshkin L et al: A method and server for predicting damaging missense mutations. Nat Methods 2010; 7: 248-249.
    • (2010) Nat Methods , vol.7 , pp. 248-249
    • Adzhubei, I.A.1    Schmidt, S.2    Peshkin, L.3
  • 35
    • 77955151784 scopus 로고    scopus 로고
    • MutationTaster evaluates disease-causing potential of sequence alterations
    • Schwarz JM, Rodelsperger C, Schuelke M, Seelow D: MutationTaster evaluates disease-causing potential of sequence alterations. Nat Methods 2010; 7: 575-576.
    • (2010) Nat Methods , vol.7 , pp. 575-576
    • Schwarz, J.M.1    Rodelsperger, C.2    Schuelke, M.3    Seelow, D.4
  • 36
    • 77954257799 scopus 로고    scopus 로고
    • ConSurf 2010: Calculating evolutionary conservation in sequence and structure of proteins and nucleic acids
    • Ashkenazy H, Erez E, Martz E, Pupko T, Ben-Tal N: ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids. Nucleic Acids Res 2010; 38: W529-W533.
    • (2010) Nucleic Acids Res , vol.38
    • Ashkenazy, H.1    Erez, E.2    Martz, E.3    Pupko, T.4    Ben-Tal, N.5
  • 37
    • 0141732282 scopus 로고    scopus 로고
    • A structural state of the myosin v motor without bound nucleotide
    • Coureux PD, Wells AL, Menetrey J et al: A structural state of the myosin V motor without bound nucleotide. Nature 2003; 425: 419-423.
    • (2003) Nature , vol.425 , pp. 419-423
    • Coureux, P.D.1    Wells, A.L.2    Menetrey, J.3
  • 38
    • 10644225267 scopus 로고    scopus 로고
    • Three myosin v structures delineate essential features of chemo-mechanical transduction
    • Coureux PD, Sweeney HL, Houdusse A: Three myosin V structures delineate essential features of chemo-mechanical transduction. EMBO J 2004; 23: 4527-4537.
    • (2004) EMBO J , vol.23 , pp. 4527-4537
    • Coureux, P.D.1    Sweeney, H.L.2    Houdusse, A.3
  • 39
    • 79953169915 scopus 로고    scopus 로고
    • Role of insert-1 of myosin VI in modulating nucleotide affinity
    • Pylypenko O, Song L, Squires G et al: Role of insert-1 of myosin VI in modulating nucleotide affinity. J Biol Chem 2011; 286: 11716-11723.
    • (2011) J Biol Chem , vol.286 , pp. 11716-11723
    • Pylypenko, O.1    Song, L.2    Squires, G.3
  • 40
    • 68349146394 scopus 로고    scopus 로고
    • Myosin VI dimerization triggers an unfolding of a three-helix bundle in order to extend its reach
    • Mukherjea M, Llinas P, Kim H et al: Myosin VI dimerization triggers an unfolding of a three-helix bundle in order to extend its reach. Mol Cell 2009; 35: 305-315.
    • (2009) Mol Cell , vol.35 , pp. 305-315
    • Mukherjea, M.1    Llinas, P.2    Kim, H.3
  • 41
    • 84855992951 scopus 로고    scopus 로고
    • Comprehensive sequence analysis of nine Usher syndrome genes in the UK National Collaborative Usher Study
    • Le Quesne Stabej P, Saihan Z, Rangesh N et al: Comprehensive sequence analysis of nine Usher syndrome genes in the UK National Collaborative Usher Study. J Med Genet 2012; 49: 27-36.
    • (2012) J Med Genet , vol.49 , pp. 27-36
    • Le Quesne Stabej, P.1    Saihan, Z.2    Rangesh, N.3
  • 42
    • 33644537736 scopus 로고    scopus 로고
    • Physical and functional interaction between protocadherin 15 and myosin VIIa in mechanosensory hair cells
    • Senften M, Schwander M, Kazmierczak P et al: Physical and functional interaction between protocadherin 15 and myosin VIIa in mechanosensory hair cells. J Neurosci 2006; 26: 2060-2071.
    • (2006) J Neurosci , vol.26 , pp. 2060-2071
    • Senften, M.1    Schwander, M.2    Kazmierczak, P.3
  • 43
    • 84861175146 scopus 로고    scopus 로고
    • Digenic inheritance of deafness caused by 8J allele of myosin-VIIA and mutations in other Usher i genes
    • Zheng QY, Scarborough JD, Zheng Y, Yu H, Choi D, Gillespie PG: Digenic inheritance of deafness caused by 8J allele of myosin-VIIA and mutations in other Usher I genes. Hum Mol Genet 2012; 21: 2588-2598.
    • (2012) Hum Mol Genet , vol.21 , pp. 2588-2598
    • Zheng, Q.Y.1    Scarborough, J.D.2    Zheng, Y.3    Yu, H.4    Choi, D.5    Gillespie, P.G.6
  • 44
    • 0030869710 scopus 로고    scopus 로고
    • Mutation profile of all 49 exons of the human myosin VIIA gene, and haplotype analysis, in Usher 1B families from diverse origins
    • Adato A, Weil D, Kalinski H et al: Mutation profile of all 49 exons of the human myosin VIIA gene, and haplotype analysis, in Usher 1B families from diverse origins. Am J Hum Genet 1997; 61: 813-821.
    • (1997) Am J Hum Genet , vol.61 , pp. 813-821
    • Adato, A.1    Weil, D.2    Kalinski, H.3
  • 45
    • 84856162108 scopus 로고    scopus 로고
    • Novel mutations of MYO7A and USH1G in Israeli Arab families with Usher syndrome type 1
    • Rizel L, Safieh C, Shalev SA et al: Novel mutations of MYO7A and USH1G in Israeli Arab families with Usher syndrome type 1. Mol Vis 2011; 17: 3548-3555.
    • (2011) Mol Vis , vol.17 , pp. 3548-3555
    • Rizel, L.1    Safieh, C.2    Shalev, S.A.3
  • 46
    • 84876694090 scopus 로고    scopus 로고
    • Progressive hereditary hearing impairment caused by a MYO6 mutation resembles presbyacusis
    • Oonk AM, Leijendeckers JM, Lammers EM et al: Progressive hereditary hearing impairment caused by a MYO6 mutation resembles presbyacusis. Hear Res 2013; 299: 88-98.
    • (2013) Hear Res , vol.299 , pp. 88-98
    • Oonk, A.M.1    Leijendeckers, J.M.2    Lammers, E.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.