Rapid identification and source-tracking of Listeria monocytogenes using MALDI-TOF mass spectrometry

International Journal of Food Microbiology

Volumn 202, Issue , 2015, Pages 1-9

  Jadhav, Snehal ^a   Gulati, Vandana ^a   Fox, Edward M ^b   Karpe, Avinash ^a,b   Beale, David J ^b   Sevior, Danielle ^c   Bhave, Mrinal ^a   Palombo, Enzo A ^a  

^a SWINBURNE UNIVERSITY OF TECHNOLOGY   (Australia)

^b CSIRO   (Australia)

^c BioMérieux Australia Pty Ltd   (Australia)

Author keywords

Chemometrics; Food safety; Mass spectrometry; PFGE; Source tracking

Indexed keywords

RESTRICTION ENDONUCLEASE;

AGAR MEDIUM; ARTICLE; AUSTRALIA; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATE; BACTERIUM ISOLATION; DAIRY PRODUCT; INCUBATION TIME; LISTERIA MONOCYTOGENES; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; NONHUMAN; PULSED FIELD GEL ELECTROPHORESIS; SPECIES DIFFERENTIATION; FOOD CONTROL; LISTERIOSIS; MASS SPECTROMETRY; MICROBIOLOGY; PHYSIOLOGY; PROCEDURES; SPECIES DIFFERENCE;

EQUIDAE; LISTERIA; LISTERIA MONOCYTOGENES;

AUSTRALIA; DAIRY PRODUCTS; ELECTROPHORESIS, GEL, PULSED-FIELD; FOOD MICROBIOLOGY; LISTERIA MONOCYTOGENES; LISTERIOSIS; SPECIES SPECIFICITY; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

EID: 84924214495     PISSN: 01681605     EISSN: 18793460     Source Type: Journal    
DOI: 10.1016/j.ijfoodmicro.2015.01.023     Document Type: Article

References (42)

1. Alessandria V., Rantsiou K., Dolci P., Cocolin L. Molecular methods to assess Listeria monocytogenes route of contamination in a dairy processing plant. Int. J. Food Microbiol. 2010, 14:S156-S162.
2. Anderson N.W., Buchan B.W., Riebe K.M., Parsons L.N., Gnacinski S., Ledeboer N.A. Effects of solid-medium type on routine identification of bacterial isolates by use of matrix-assisted laser desorption ionization-time of flight mass spectrometry. J. Clin. Microbiol. 2012, 50:1008-1013.
3. Azizan K.A., Baharum S.N., Ressom H.W., Noor N.M. GC-MS analysis and PLS-DA validation of the trimethyl silyl-derivatization techniques. Am. J. Appl. Sci. 2012, 9:1124-1136.
4. Balážová T., Makovcová J., Šedo O., Slaný M., Faldyna M., Zdráhal Z. The influence of culture conditions on the identification of Mycobacterium species by MALDI-TOF MS profiling. FEMS Microbiol. Lett. 2014, 353:77-84.
5. Barbuddhe S.B., Maier T., Schwarz G., Kostrzewa M., Hof H., Domann E., Chakraborty T., Hain T. Rapid identification and typing of Listeria species by matrix-assisted laser desorption ionization-time of flight mass spectrometry. Appl. Environ. Microbiol. 2008, 74:5402-5407.
6. Böhme K., Fernández-No I.C., Barros-Velázquez J., Gallardo J.M., Calo-Mata P., Cañas B. Species differentiation of seafood spoilage and pathogenic gram-negative bacteria by MALDI-TOF mass fingerprinting. J. Proteome Res. 2010, 9:3169-3183.
7. Böhme K., Morandi S., Cremonesi P., Fernández No I.C., Barros-Velázquez J., Castiglioni B., Brasca M., Canasa B., Calo-Mata P. Characterization of Staphylococcus aureus strains isolated from Italian dairy products by MALDI-TOF mass fingerprinting. Electrophoresis 2012, 33:2355-2364.
8. Croxatto A., Prod'hom G., Greub G. Applications of MALDI-TOF mass spectrometry in clinical diagnostic microbiology. FEMS Microbiol. Rev. 2012, 36:380-407.
9. Doumith M., Buchrieser C., Glaser P., Jacquet C., Martin P. Differentiation of the major Listeria monocytogenes serovars by multiplex PCR. J. Clin. Microbiol. 2004, 42:3819-3822.
10. Fox E., Hunt K., O'Brien M., Jordan K. Listeria monocytogenes in Irish farmhouse cheese processing environments. Int. J. Food Microbiol. 2011, 145:S39-S45.
11. Fox E.M., Leonard N., Jordan K. Molecular diversity of Listeria monocytogenes isolated from Irish dairy farms. Foodborne Pathog. Dis. 2011, 8:635-641.
12. Gasanov U., Hughes D., Hansbro P.M. Methods for the isolation and identification of Listeria spp. and Listeria monocytogenes: a review. FEMS Microbiol. Rev. 2005, 29:851-875.
13. Goldstein J.E., Zhang L., Borror C.M., Rago J.V., Sandrin T.R. Culture conditions and sample preparation methods affect spectrum quality and reproducibility during profiling of Staphylococcus aureus with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Lett. Appl. Microbiol. 2013, 57:144-150.
14. Griffin P.M., Price G.R., Schooneveldt J.M., Schlebusch S., Tilse M.H., Urbanski T., Hamilton B., Venter D. Use of matrix-assisted laser desorption ionization-time of flight mass spectrometry to identify vancomycin-resistant Enterococci and investigate the epidemiology of an outbreak. J. Clin. Microbiol. 2012, 50:2918-2931.
15. Hsueh P.-R., Lee T.-F., Du S.-H., Teng S.H., Liao C.H., Sheng W.H., Teng L.J. Bruker biotyper matrix-assisted laser desorption ionization-time of flight mass spectrometry system for identification of Nocardia, Rhodococcus, Kocuria, Gordonia, Tsukamurella, and Listeria Species. J. Clin. Microbiol. 2014, 52:2371-2379.
16. Hunter P.R., Gaston M.A. Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity. J. Clin. Microbiol. 1988, 26:2465-2466.
17. Jadhav S., Bhave M., Palombo E.A. Methods used for the detection and subtyping of Listeria monocytogenes. J. Microbiol. Methods 2012, 88:327-341.
18. Jadhav S., Sevior D., Bhave M., Palombo E.A. Detection of Listeria monocytogenes from selective enrichment broth using MALDI-TOF mass spectrometry. J. Proteomics 2014, 97:100-106.
19. Kern C.C., Vogel R.F., Behr J. Differentiation of Lactobacillus brevis strains using matrix-assisted-laser-desorption-ionization-time-of-flight mass spectrometry with respect to their beer spoilage potential. Food Microbiol. 2014, 40:18-24.
20. Lartigue M.-F., Héry-Arnaud G., Haguenoer E., Domelier A.-S., Schmit P.-O., van der Mee-Marquet N., Lanotte P., Mereghetti L., Kostrzewa M., Quentin R. Identification of Streptococcus agalactiae isolates from various phylogenetic lineages by matrix-assisted laser desorption ionization-time of flight mass spectrometry. J. Clin. Microbiol. 2009, 47:2284-2287.
21. Lu Y., Chen Y., Lu X.A., Lv J., Man C.X., Chai Y.L., Jiang Y.J. Comparison of methods for the microbiological identification and typing of Cronobacter species in infant formula. J. Dairy Sci. 2014, 97:632-641.
22. Martiny D., Busson L., Wybo I., El Haj R.A., Dediste A., Vandenberg O. Comparison of the Microflex LT and Vitek MS systems for routine identification of bacteria by matrix-assisted laser desorption ionization-time of flight mass spectrometry. J. Clin. Microbiol. 2012, 50:1313-1325.
23. Pavlovic M., Huber I., Konrad R., Busch U. Application of MALDI-TOF MS for the identification of food borne bacteria. Open Microbiol. J. 2013, 7:135-141.
24. PulseNet USA Standard operating procedure for PulseNet PFGE of Listeria monocytogenes Available at, (last accessed May 21, 2014). http://www.cdc.gov/pulsenet/PDF/listeria-pfge-protocol-508c.pdf.
25. Quintela-Qunitela-Baluja M., Böhme K., Fernández-No I.C., Morandi S., Alnakip M.E., Caamaño-Antelo S., Velázquez J.B., Calo-Mata P. Characterization of different food-isolated Enterococcus strains by MALDI-TOF mass fingerprinting. Electrophoresis 2013, 34:2240-2250.
26. Reich M., Bosshard P.P., Stark M., Beyser K., Borgmann S. Species identification of bacteria and fungi from solid and liquid culture media by MALDI-TOF mass spectrometry. Bacteriol. Parasitol. 2014, S5:1-8.
27. Sandrin T.R., Goldstein J.E., Schumaker S. MALDI TOF MS profiling of bacteria at the strain level: a review. Mass Spectrom. Rev. 2013, 32:188-217.
28. Šedo O., Sedláček I., Zdráhal Z. Sample preparation methods for MALDI-MS profiling of bacteria. Mass Spectrom. Rev. 2011, 30:417-434.
29. Siegrist T.J., Anderson P.D., Huen W.H., Kleinheinz G.T., McDermott C.M., Sandrin T.R. Discrimination and characterization of environmental strains of Escherichia coli by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS). J. Microbiol. Methods 2007, 68:554-562.
30. Sogawa K., Watanabe M., Sato K., Segawa S., Ishii C., Miyabe A., Murata S., Saito T., Nomura F. Use of the MALDI BioTyper system with MALDI-TOF mass spectrometry for rapid identification of microorganisms. Anal. Bioanal. Chem. 2011, 400:1905-1911.
31. Stephan R., Cernela N., Ziegler D., Pflüger V., Tonolla M., Ravasi D., Fredriksson-Ahomaa M., Hächler H. Rapid species specific identification and subtyping of Yersinia enterocolitica by MALDI-TOF mass spectrometry. J. Microbiol. Methods 2011, 87:150-153.
32. Valentine N., Wunschel S., Wunschel D., Petersen C., Wahl K. Effect of culture conditions on microorganism identification by matrix-assisted laser desorption ionization mass spectrometry. Appl. Environ. Microbiol. 2005, 71:58-64.
33. Verroken A., Bauraing C., Deplano A., Bogaerts P., Huang D., Wauters G., Glupczynski Y. Epidemiological investigation of a nosocomial outbreak of multidrug-resistant Corynebacterium striatum at one Belgian university hospital. Clin. Microbiol. Infect. 2014, 20:44-50.
34. Walker J., Fox A.J., Edwards-Jones V., Gordon D.B. Intact cell mass spectrometry (ICMS) used to type methicillin-resistant Staphylococcus aureus: media effects and inter-laboratory reproducibility. J. Microbiol. Methods 2002, 48:117-126.
35. Wang Y.R., Chen Q., Cui S.H., Li F.Q. Characterization of Staphylococcus aureus isolated from clinical specimens by matrix assisted laser desorption/ionization time-of-flight mass spectrometry. Biomed. Environ. Sci. 2013, 26:430-436.
36. Ward T.J., Ducey F.T., Usgaard T., Dunn K.A., Bielawski J.P. Multilocus genotyping assays for single nucleotide polymorphism-based subtyping of Listeria monocytogenes isolates. Appl. Environ. Microbiol. 2008, 74:7629-7642.
37. Waters V., Zlosnik J.E.A., Yau Y.C.W., Speert D.P., Aaron S.D., Guttman D.S. Comparison of three typing methods for Pseudomonas aeruginosa isolates from patients with cystic fibrosis. Eur. J. Clin. Microbiol. Infect. Dis. 2012, 31:3341-3350.
38. Wieser A., Schneider L., Jung J., Schubert S. MALDI-TOF MS in microbiological diagnostics-identification of microorganisms and beyond (mini review). Appl. Microbiol. Biotechnol. 2012, 93:965-974.
39. Williamson Y.M., Moura H., Woolfitt A.R., Pirkle J.L., Barr J.R., Carvalho M.D.G., Ades E.D., Carlone G.M., Sampson J.S. Differentiation of Streptococcus pneumoniae conjunctivitis outbreak isolates by matrix-assisted laser desorption ionization-time of flight mass spectrometry. Appl. Environ. Microbiol. 2008, 74:5891-5897.
40. Wolterss M., Rohde H., Maier T., Belmar-Campos C., Franke G., Scherpe S., Aepfelbacher M., Christner M. MALDI-TOF MS fingerprinting allows for discrimination of major methicillin-resistant Staphylococcus aureus lineages. Int. J. Med. Microbiol. 2011, 301:64-68.
41. Xia J., Mandal R., Sinelnikov I.V., Broadhurst D., Wishart D.S. MetaboAnalyst 2.0-a comprehensive server for metabolomic data analysis. Nucleic Acids Res. 2012, 37:W652-W660.
42. Zhang D., Zhang H., Yang L., Guo J., Li X., Feng Y. Simultaneous detection of Listeria monocytogenes, Staphylococcus aureus, Salmonella enterica and Escherichia coli O157:H7 in food samples using multiplex PCR method. J. Food Saf. 2009, 29:348-363.