Agaricus section Arvenses: Three new species inhighland subtropical Southwest China

Fungal Biology

Volumn 119, Issue 2-3, 2015, Pages 79-94

  Gui, Yang ^a,b,c   Zhu, Guo S ^b,c   Callac, Philippe ^e   Hyde, Kevin D ^f   Parra, Luis A ^g   Chen, Jie ^f   Yang, Tong J ^b   Huang, Wan B ^b   Gong, Guang L ^b   Liu, Zuo Y ^c,d  

^a HUAZHONG AGRICULTURAL UNIVERSITY   (China)

^b Guizhou Provincial Institute of Crop Germplasm Resources   (China)

^c Guizhou Key Laboratory of Agricultural Biotechnology   (China)

^d Jinlong Community   (China)

^e CEMAGREF   (France)

^f MAE FAH LUANG UNIVERSITY   (Thailand)

^g NONE   (Spain)

Author keywords

Edible mushrooms; ITS sequences; Medicinal mushrooms; Phylogeny; Taxonomy

Indexed keywords

EDIBLE SPECIES; GEOGRAPHICAL DISTRIBUTION; IDENTIFICATION KEY; MUSHROOM; NEW SPECIES; PHYLOGENETICS; SPECIES RICHNESS; SUBTROPICAL REGION;

CHINA;

AGARICUS; AGARICUS ABRUPTIBULBUS; AGARICUS SUBRUFESCENS; BASIDIOMYCOTA;

FUNGAL DNA; PIGMENT; RIBOSOMAL SPACER DNA;

AGARICUS; CHEMISTRY; CHINA; CLASSIFICATION; CLIMATE; CLUSTER ANALYSIS; CYTOLOGY; DNA SEQUENCE; FUNGUS SPORE; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR GENETICS; PHYLOGENY; PHYSIOLOGY;

AGARICUS; CHINA; CLIMATE; CLUSTER ANALYSIS; DNA, FUNGAL; DNA, RIBOSOMAL SPACER; MOLECULAR SEQUENCE DATA; PHYLOGENY; PIGMENTS, BIOLOGICAL; SEQUENCE ANALYSIS, DNA; SPORES, FUNGAL;

EID: 84924164751     PISSN: 18786146     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.funbio.2014.10.005     Document Type: Article

References (78)

1. Anonymous The Online Auction Color Chart Company 2004, USA.
2. Barros L., Baptista P., Correia D.M., Casalb S., Oliveira B., Ferreira I.C.F.R. Fatty acid and sugar compositions and nutritional value of five wild edible mushrooms from Northeast Portugal. Food Chemistry 2007, 105:140-145.
3. Bi Z.S., Li T.H., Zhang W.M. A Preliminary Agaric Flora of Hainan Province 1997, Guangdong Higher Education Press, China.
4. Bi Z.S., Zheng G.Y., Li T.H., Zhang W.M. A Preliminary Agaric Flora of Hainan Province 1997, Guangdong Higher Education Press, China.
5. Bohus G., Vasas G., Locsmándi C. Two new fungus species from Hungary (Basidiomycetes, Agaricales). Annales Historico-Naturales Musei Nationalis Hungarici 1999, 91:37-44.
6. Callac P., Guinberteau J. Morphological and molecular characterization of two novel species of Agaricus section Xanthodermatei. Mycologia 2005, 97:416-424.
7. Cappelli A. Agaricus L.: Fr. (Psalliota Fr.). Fungi Europaei, Vol.1 1984, Libreria editrice Biella Giovanna, Italy, Saronno, p.42-47.
8. Challen M.P., Kerrigan R.W., Callac P. A phylogenetic reconstruction and emendation of Agaricus section Duploannulatae. Mycologia 2003, 95:61-73.
9. Chen J., Zhao R.L., Karunarathna S.C., Callac P., Raspé O., Bahkali A.H., Hyde K.D. Agaricus megalosporus: a new species in section Minores. Cryptogamie Mycologie 2012, 33:145-155.
10. Chevenet F., Croce O., Hebrard M., Christen R., Berry V. ScripTree: scripting phylogenetic graphics. Bioinformatics 2010, 26:1125-1126.
11. Dabbour I.R., Takruri H.R. Protein quality of four types of edible mushrooms found in Jordan. Plant Foods for Human Nutrition 2002, 57:1-11.
12. De Silva D.D., Rapior S., Fons F., Bahkali A.H., Hyde K.D. Medicinal mushrooms in supportive cancer therapies: an approach to anti-cancer effects and putative mechanisms of action. Fungal Diversity 2012, 55:1-35.
13. De Silva D.D., Rapior S., Hyde K.D., Bahkali A.H. Medicinal mushrooms in prevention and control of diabetes mellitus. Fungal Diversity 2012, 56:1-29.
14. De Silva D.D., Rapior S., Sudarman E., Stadler M., Xu J., Alias S.A., Hyde K.D. Bioactive metabolites from macrofungi: ethnopharmacology, biological activities and chemistry. Fungal Diversity 2013, 62:1-40.
15. Elliott T.J. Sexuality in the genus Agaricus. Mushroom Science 1978, 10:41-50.
16. Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 1985, 39:783-791.
17. Fermor T.R. Agaricus macrosporus: an edible fungus with commercial potential. Scientific Horticulture 1982, 16:273-282.
18. Fritsche G. Tests on breeding with Agaricus arvensis. Mushroom Science 1978, 10:91-102.
19. Gardes M., Bruns T.D. ITS primers with enhanced specificity for Basidiomycetes: application to identification of mycorrhizae and rusts. Molecular Ecology 1993, 2:113-118.
20. García M.A., Alonso J., Melgar M.J. Agaricus macrosporus as a potential bioremediation agent for substrates contaminated with heavy metals. Journal of Chemical Technology and Biotechnology 2005, 80:325-330.
21. Geml J., Rimóczi I. Attempts at cultivating wild strains of various Agaricus species. Fungal Genetics Newsletter 1999, 46:38.
22. Geml J., Royse D.J. Molecular phylogeny and cultivation of Agaricus species. Proceedings of the IV International Conference on Mushroom Biology and Mushroom 2002.
23. Geml J., Geiser D.M., Royse D.J. Molecular evolution of Agaricus species based on ITS and LSU rDNA sequences. Mycological Progress 2004, 3:157-176.
24. Geml J., Laursen G.A., Nusbaum H.C., Taylor D.L. Two new species of Agaricus from the Subantarctic. Mycotaxon 2007, 100:193-208.
25. Gui J.H., Wei S.L., Wang S.R. The Diversity of Agaricus in Qilian Mountains of Gansu Province 2011, http://www.paper.edu.cn.
26. Guindon S., Dufayard J.F., Lefort V., Anisimova M., Hordijk W., Gascuel O. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Systematic Biology 2010, 59:307-321.
27. Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium 1999, 41:95-98.
28. Heinemann P. Champignons recoltés au Congo Belge par Madame M. Goossens-Fontana II. Agaricus Fries s.s. Bulletin du Jardin Botanique de l'État a Bruxelles 1956, 26:1-127.
29. Heinemann P. Essai d'une clé de détermination des genres Agaricus et Micropsalliota. Sydowia 1977, 30:6-37.
30. Heinemann P. Les genres Agaricus et Micropsalliota en Malaisie et en Indonesie. Bulletin du Jardin Botanique National de Belgique 1980, 50:3-68.
31. Heinemann P. Quelques Psalliotes de Nouvelle Guinée (Papua New Guinea). Bulletin du Jardin Botanique National de Belgique 1982, 52:405-413.
32. Heinemann P. Agaricus austroamericani VI. Aperçu sur les Agaricus de Patagonie et de la terre de Feu. Bulletin du Jardin Botanique National de Belgique 1986, 56:417-446.
33. Imai S. Studies on the Agaricaceae of Hokkaido. Journal of the College of Agriculture, Hokkaido Imperial University 1938, 43:179-378.
34. Karunarathna S.C., Guinberteau J., Chen J., Vellinga E.C., Zhao R.L., Chukeatirote E., Yan J., Hyde K.D., Callac P. Two potentially edible species in Agaricus tropical clade I. Chiang Mai Journal of Science 2014, 41:771-780.
35. Kerrigan R.W. Agaricus subrufescens, a cultivated edible and medicinal mushroom, and its synonyms. Mycologia 2005, 97:12-24.
36. Kerrigan R.W., Callac P., Guinberteau J., Challen M.P., Parra L.A. Agaricus section Xanthodermatei: a phylogenetic reconstruction with commentary on taxa. Mycologia 2005, 97:1292-1315.
37. Kerrigan R.W., Callac P., Parra L.A. New and rare taxa in Agaricus section Bivelares (Duploannulati). Mycologia 2008, 100:876-892.
38. Klomklung N., Karunarathna S.C., Chukeatirote E., Hyde K.D. Domestication of wild strain of Pleurotus giganteus. Sydowia 2012, 64:39-53.
39. Lebel T., Syme A. Sequestrate species of Agaricus and Macrolepiota from Australia: new species and combinations and their position in a calibrated phylogeny. Mycologia 2012, 104:496-520.
40. Lebel T. Two new species of sequestrate Agaricus (section Minores) from Australia. Mycological Progress 2013, 12:699-707.
41. Li J.Z., Hu X.W., Peng Y.B. Macrofungus Flora of Hunan 1993, Human Normal University Press, China.
42. Li Y. New species and records of the genus Agaricus from China. Acta Botanica Yunnanica 1990, 12:54-160.
43. Llarena-Hernández R.C., Largeteau M.L., Farnet A.M., Foulongne-Oriol M., Ferrer N., Regnault-Roger C., Savoie J.M. Potential of European wild strains of Agaricus subrufescens for productivity and quality on wheat straw based compost. World Journal of Microbiology & Biotechnology 2013, 29:1243-1253.
44. Mao X.L. The Macrofungi in China 2000, Henan Science and Technology Press, China.
45. Marekov I., Momchilova S., Grung B., Damyanova B.N. Fatty acid composition of wild mushroom species of order Agaricales-examination by gas chromatography-mass spectrometry and chemometrics. Journal of Chromatography B 2012, 910:54-60.
46. Mendoza J.M., Palo S.L. A revision of the genus Psalliota in the Philippines. The Philippine Journal of Science 1940, 72:337-345.
47. Mitchell A.D., Walter M. Species of Agaricus occurring in New Zealand. New Zealand Journal of Botany 1999, 37:715-725.
48. Miyagawa M., Hirono Y., Kawazoe A., Shigeyoshi E., Nose M., Sakura M., Pinkerton K.E., Takeuchi M. Effect of Hot Water Extract from Agaricus Blazei Murill on Chemotaxis of Neutrophils. Journal of Cosmetics, Dermatological Sciences and Applications 2013, 3:12-17.
49. Nauta M.M. Flora Agaricina Neerlandica 2001, vol. 5:23-61. AA Balkema Publishers, Lisse.
50. Notredame C., Higgins D.G., Heringa J. T-Coffee: a novel method for fast and accurate multiple sequence alignment. Journal of Molecular Biology 2000, 302:205-217.
51. Orsine J.V.C., Novaes M.R.C.G., Asquieri E.R. Nutritional value of Agaricus sylvaticus: mushroom grown in Brazil. Nutricion Hospitalaria 2012, 27:449-455.
52. Öztürk M., Duru M.E., Kivrak S., Mercan-Doğan N., Türkoglu A., Özler M.A. Invitro antioxidant, anticholinesterase and antimicrobial activity studies on three Agaricus species with fatty acid compositions and iron contents: a comparative study on the three most edible mushrooms. Food and Chemical Toxicology 2011, 49:1353-1360.
53. Parra L.A., Agaricus L. Allopsalliota Nauta & Bas. Part I 2008, EdizioniCandusso, Italy, Alassio.
54. Parra L.A., Agaricus L. Allopsalliota Nauta & Bas. Part II 2013, Candusso Edizioni s.a.s., Italy, Alassio.
55. Parra L.A., Mua A., Cappelli A., Callac P. Agaricus biannulatus sp. nov., a new species of the section Xanthodermatei collected in Sardinia and Sicily. Micologia e vegetazione Mediterranea 2011, 26:3-20.
56. Phoenix G.K., Hicks K.W., Cinderby S., Kuylenstierna J.C.I., Stock W.D., Dentener F.J., Giller K.E., Austin A.T., Lefroy R.D.B., Gimeno B.S., et al. Atmospheric nitrogen deposition in world biodiversity hotspots: the need for a greater global perspective in assessing N deposition impacts. Global Change Biology 2006, 12:470-476.
57. Posada D., Crandall K.A. Modeltest: testing the model of DNA substitution. Bioinformatics 1998, 14:817-818.
58. Posada D. Using Modeltest and PAUP* to select a model of nucleotide substitution. Current Protocols in Bioinformatics 2003, 6.5.1-6.5.14. John Wiley & Sons, New York. A.D. Baxevanis, D.B. Davison, R.D.M. Page, G.A. Petsko, L.D. Stein, G.D. Stormo (Eds.).
59. Qian H., Ricklefs R.E. Large-scale processes and the Asian bias in species diversity of temperate plants. Nature 2000, 407:180-182.
60. Rapior S., Breheret S., Talou T., Pélissier Y., Bessière J.M. The anise-like Odour of Clitocybe Odoura, Lentinellus cochleatus and Agaricus essettei. Mycologia 2002, 94:373-376.
61. Singer R., Smith A.H. Studies on secotiaceous fungi: Endoptychum depressum. Brittonia 1958, 10:216-221.
62. Singer R. The Agaricales in Modern Taxonomy 1986, 485-487. Koeltz Scientific Books, Germany. 4th edn.
63. Stadler M., Hellwig V., Mayer-Bartschmid A., Denzer D., Wiese B., Burkhardt N. Novel analgesic triglycerides from cultures of Agaricus macrosporus and other basidiomycetes as selective inhibitors of neurolysin. Journal of Antibiotics 2005, 58:775-786.
64. Swofford D.L. PAUP*Phylogenetic Analysis Using Parsimony (and other methods), 4.0b4a 2002, Sinauer Associates, Sunderland, MA.
65. Thawthong A., Karunarathna S.C., Thongklang N., Chukeatirote E., Kakumyan P., Chamyuang S., Maya R.L., Mortimer P.E., Xu J.C., Callac P., et al. Discovering and domesticating wild tropical cultivatable mushrooms. Chiang Mai Journal of Science 2014, 41:731-764.
66. Wang H., Fu Z.M., Han C.C. The Medicinal Values of Culinary-Medicinal Royal Sun Mushroom (Agaricus blazei Murrill). Evidence-Based Complementary and Alternative Medicine 2013, 1-6. Available from:. http://dx.doi.org/10.1155/2013/842619.
67. White T.J., Bruns T.L., Lee S., Taylor J.W. Application and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: a guide to methods and applications 1990, 315-322. Academic Press, New York, Chapter 38. M.A. Innis, D.H. Gefand, J.J. Sninsky, J.T. White (Eds.).
68. Wisitrassameewong K., Karunarathna S.C., Thongklang N., Zhao R.L., Callac P., Chukeatirote E., Bahkali A.H., Hyde K.D. Agaricus subrufescens: new to Thailand. Chiang Mai Journal of Science 2012, 39:281-291.
69. Wisitrassameewong K., Karunarathna S.C., Thongklang N., Zhao R.L., Callac P., Moukha S., Férandon C., Chukeatirote E., Hyde K.D. Agaricus subrufescens: a review. Saudi Journal of Biological Sciences 2012, 19:31-146.
70. Wu M.F., Hsu Y.M., Tang M.C., Chen H.C., Chung J.G., Lu H.F., Lin J.P., Tang N.Y., Yeh C., Yeh M. Agaricus blazei Murill Extract Abrogates CCl4-induced Liver Injury in Rats. invivo 2011, 25:35-40.
71. Wu X.L. Macrofungus Flora of Guizhou 1989, Guizhou People's Publishing House.
72. Xu J., Yoell H.J., Anderson J.B. An efficient protocol forisolatingDNA from higher fungi. Trends in genetics 1994, 10:26-27.
73. Yu Q.H., Zhou J.L., Zhao R.L. Agaricus flocculosipes - a species of Agaricus newly recorded in China. Acta Edulis Fungi 2014, 21:64-68.
74. Zeller S.M. New or noteworthy Agaricus from the pacific coast states. Mycologia 1938, 30:468-469.
75. Zhang X.Y. Illustrations of Edible Fungi and Poisonous Fungi in Guizhou 1991, Guizhou Science and Technology Press.
76. Zhao R.L., Karunarathna S.C., Raspé O., Parra L.A., Guinberteau J., Moinard M., Kesel A.D., Barroso R., Courtecuisse R., Hyde K.D., et al. Major clades in tropical Agaricus. Fungal Diversity 2011, 51:279-296.
77. Zhao R.L., Hyde K.D., Desjardin D.E., Raspe O., Soytong K., Guinberteau J., Karunarathna S.C., Callac P. Agaricus flocculosipes sp. nov., a new potentially cultivatable species from the palaeotropics. Mycoscience 2012, 53:300-311.
78. Zhao R.L., Desjardin D.E., Callac P., Parra L.A., Guinberteau J., Soytong K., Karunarathna S., Zhang Y., Hyde K.D. Two species of Agaricus section Xanthodermatei from Thailand. Mycotaxon 2013, 122:187-195.