메뉴 건너뛰기




Volumn 6, Issue 1, 2015, Pages

Dynamic changes in the subgingival microbiome and their potential for diagnosis and prognosis of periodontitis

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; AGED; ARTICLE; CLINICAL ARTICLE; CLINICAL EXAMINATION; CLINICAL INDICATOR; CONTROLLED STUDY; DISEASE ASSOCIATION; FOLLOW UP; HUMAN; METAGENOMIC SHOTGUN SEQUENCING; METAGENOMICS; MICROBIOME; MOLECULAR DYNAMICS; PATHOGENESIS; PERIODONTITIS; PRIORITY JOURNAL; PROGNOSIS; RNA SEQUENCE; SEQUENCE ANALYSIS; SUBGINGIVAL MICROBIOME; TAXONOMY; BIOTA; DNA SEQUENCE; GINGIVA; LONGITUDINAL STUDY; MICROBIOLOGY; MIDDLE AGED; PREDICTIVE VALUE; TOOTH ROOT;

EID: 84924117525     PISSN: 21612129     EISSN: 21507511     Source Type: Journal    
DOI: 10.1128/mBio.01926-14     Document Type: Article
Times cited : (137)

References (49)
  • 1
    • 84858439578 scopus 로고    scopus 로고
    • The human microbiome: At the interface of health and disease
    • Cho I, Blaser MJ. 2012. The human microbiome: at the interface of health and disease. Nat Rev Genet 13: 260-270. http://dx. doi. org/10. 1038/nrg3182.
    • (2012) Nat Rev Genet , vol.13 , pp. 260-270
    • Cho, I.1    Blaser, M.J.2
  • 2
    • 84856901973 scopus 로고    scopus 로고
    • Human microbiome in health and disease
    • Pflughoeft KJ, Versalovic J. 2012. Human microbiome in health and disease. Annu Rev Pathol 7: 99-122. http://dx. doi. org/10. 1146/annurev-pathol-011811-132421.
    • (2012) Annu Rev Pathol , vol.7 , pp. 99-122
    • Pflughoeft, K.J.1    Versalovic, J.2
  • 6
    • 84866507629 scopus 로고    scopus 로고
    • Prevalence of periodontitis in adults in the United States: 2009 and 2010
    • Eke PI, Dye BA, Wei L, Thornton-Evans GO, Genco RJ. 2012. Prevalence of periodontitis in adults in the United States: 2009 and 2010. J Dent Res 91: 914-920. http://dx. doi. org/10. 1177/0022034512457373.
    • (2012) J Dent Res , vol.91 , pp. 914-920
    • Eke, P.I.1    Dye, B.A.2    Wei, L.3    Thornton-Evans, G.O.4    Genco, R.J.5
  • 8
    • 77953620116 scopus 로고    scopus 로고
    • Oral multispecies biofilm development and the key role of cell-cell distance
    • Kolenbrander PE, Palmer RJ, Jr, Periasamy S, Jakubovics NS. 2010. Oral multispecies biofilm development and the key role of cell-cell distance. Nat Rev Microbiol 8: 471-480. http://dx. doi. org/10. 1038/nrmicro2381.
    • (2010) Nat Rev Microbiol , vol.8 , pp. 471-480
    • Kolenbrander, P.E.1    Palmer, R.J.2    Periasamy, S.3    Jakubovics, N.S.4
  • 9
    • 84877021027 scopus 로고    scopus 로고
    • Periodontal systemic associations: Review of the evidence
    • Linden GJ, Lyons A, Scannapieco FA. 2013. Periodontal systemic associations: review of the evidence. J Clin Periodontol 40(Suppl 14): S8-S19. http://dx. doi. org/10. 1111/jcpe. 12064.
    • (2013) J Clin Periodontol , vol.40 , pp. S8-S19
    • Linden, G.J.1    Lyons, A.2    Scannapieco, F.A.3
  • 11
    • 0025984637 scopus 로고
    • Prognosis versus actual outcome: A long-term survey of 100 treated periodontal patients under maintenance care
    • McGuire MK. 1991. Prognosis versus actual outcome: a long-term survey of 100 treated periodontal patients under maintenance care. J Periodontol 62: 51-58. http://dx. doi. org/10. 1902/jop. 1991. 62. 1. 51.
    • (1991) J Periodontol , vol.62 , pp. 51-58
    • McGuire, M.K.1
  • 12
    • 0030184594 scopus 로고    scopus 로고
    • Prognosis versus actual outcome. II. The effectiveness of clinical parameters in developing an accurate prognosis
    • McGuire MK, Nunn ME. 1996. Prognosis versus actual outcome. II. The effectiveness of clinical parameters in developing an accurate prognosis. J Periodontol 67: 658-665. http://dx. doi. org/10. 1902/jop. 1996. 67. 7. 658.
    • (1996) J Periodontol , vol.67 , pp. 658-665
    • McGuire, M.K.1    Nunn, M.E.2
  • 14
    • 84861342868 scopus 로고    scopus 로고
    • Distinct and complex bacterial profiles in human periodontitis and health revealed by 16S pyrosequencing
    • Griffen AL, Beall CJ, Campbell JH, Firestone ND, Kumar PS, Yang ZK, Podar M, Leys EJ. 2012. Distinct and complex bacterial profiles in human periodontitis and health revealed by 16S pyrosequencing. ISME J 6: 1176-1185. http://dx. doi. org/10. 1038/ismej. 2011. 191.
    • (2012) ISME J , vol.6 , pp. 1176-1185
    • Griffen, A.L.1    Beall, C.J.2    Campbell, J.H.3    Firestone, N.D.4    Kumar, P.S.5    Yang, Z.K.6    Podar, M.7    Leys, E.J.8
  • 16
    • 84876842615 scopus 로고    scopus 로고
    • The subgingival microbiome in health and periodontitis and its relationship with community biomass and inflammation
    • Abusleme L, Dupuy AK, Dutzan N, Silva N, Burleson JA, Strausbaugh LD, Gamonal J, Diaz PI. 2013. The subgingival microbiome in health and periodontitis and its relationship with community biomass and inflammation. ISME J 7: 1016-1025. http://dx. doi. org/10. 1038/ismej. 2012. 174.
    • (2013) ISME J , vol.7 , pp. 1016-1025
    • Abusleme, L.1    Dupuy, A.K.2    Dutzan, N.3    Silva, N.4    Burleson, J.A.5    Strausbaugh, L.D.6    Gamonal, J.7    Diaz, P.I.8
  • 18
    • 84864754044 scopus 로고    scopus 로고
    • Bacterial community shift in treated periodontitis patients revealed by ion torrent 16S rRNA gene amplicon sequencing
    • Jünemann S, Prior K, Szczepanowski R, Harks I, Ehmke B, Goesmann A, Stoye J, Harmsen D. 2012. Bacterial community shift in treated periodontitis patients revealed by ion torrent 16S rRNA gene amplicon sequencing. PLoS One 7: e41606. http://dx. doi. org/10. 1371/journal. pone. 0041606.
    • (2012) PLoS One , vol.7
    • Jünemann, S.1    Prior, K.2    Szczepanowski, R.3    Harks, I.4    Ehmke, B.5    Goesmann, A.6    Stoye, J.7    Harmsen, D.8
  • 19
    • 84884195506 scopus 로고    scopus 로고
    • Metagenomic analysis of subgingival microbiota following non-surgical periodontal therapy: A pilot study
    • Laksmana T, Kittichotirat W, Huang Y, Chen W, Jorgensen M, Bumgarner R, Chen C. 2012. Metagenomic analysis of subgingival microbiota following non-surgical periodontal therapy: a pilot study. Open Dent J 6: 255-261.
    • (2012) Open Dent J , vol.6 , pp. 255-261
    • Laksmana, T.1    Kittichotirat, W.2    Huang, Y.3    Chen, W.4    Jorgensen, M.5    Bumgarner, R.6    Chen, C.7
  • 20
    • 84984777627 scopus 로고    scopus 로고
    • Conclusive support for mechanical nonsurgical pocket therapy in the treatment of periodontal disease
    • Matthews D. 2005. Conclusive support for mechanical nonsurgical pocket therapy in the treatment of periodontal disease. How effective is mechanical nonsurgical pocket therapy? Evid Based Dent 6: 68-69. http://dx. doi. org/10. 1038/sj. ebd. 6400338.
    • (2005) How effective is mechanical nonsurgical pocket therapy? Evid Based Dent , vol.6 , pp. 68-69
    • Matthews, D.1
  • 22
    • 82555183004 scopus 로고    scopus 로고
    • The Human Oral Microbiome Database: A web accessible resource for investigating oral microbe taxonomic and genomic information
    • Chen T, Yu WH, Izard J, Baranova OV, Lakshmanan A, Dewhirst FE. 2010. The Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic information. Database (Oxford) 2010: baq013. http://dx. doi. org/10. 1093/database/baq013.
    • (2010) Database (Oxford) , vol.2010
    • Chen, T.1    Yu, W.H.2    Izard, J.3    Baranova, O.V.4    Lakshmanan, A.5    Dewhirst, F.E.6
  • 27
    • 0029939335 scopus 로고    scopus 로고
    • Antagonistic effect of oral bacteria towards Treponema denticola
    • Grenier D. 1996. Antagonistic effect of oral bacteria towards Treponema denticola. J Clin Microbiol 34: 1249-1252.
    • (1996) J Clin Microbiol , vol.34 , pp. 1249-1252
    • Grenier, D.1
  • 29
    • 80054921127 scopus 로고    scopus 로고
    • The relationship of the oral microbiota to periodontal health and disease
    • Curtis MA, Zenobia C, Darveau RP. 2011. The relationship of the oral microbiota to periodontal health and disease. Cell Host Microbe 10: 302-306. http://dx. doi. org/10. 1016/j. chom. 2011. 09. 008.
    • (2011) Cell Host Microbe , vol.10 , pp. 302-306
    • Curtis, M.A.1    Zenobia, C.2    Darveau, R.P.3
  • 30
    • 0036948288 scopus 로고    scopus 로고
    • Genetics of motility and chemotaxis of a fascinating group of bacteria: The spirochetes
    • Charon NW, Goldstein SF. 2002. Genetics of motility and chemotaxis of a fascinating group of bacteria: the spirochetes. Annu Rev Genet 36: 47-73. http://dx. doi. org/10. 1146/annurev. genet. 36. 041602. 134359.
    • (2002) Annu Rev Genet , vol.36 , pp. 47-73
    • Charon, N.W.1    Goldstein, S.F.2
  • 31
    • 79952733471 scopus 로고    scopus 로고
    • Virulence factors of the oral spirochete Treponema denticola
    • Dashper SG, Seers CA, Tan KH, Reynolds EC. 2011. Virulence factors of the oral spirochete Treponema denticola. J Dent Res 90: 691-703. http://dx. doi. org/10. 1177/0022034510385242.
    • (2011) J Dent Res , vol.90 , pp. 691-703
    • Dashper, S.G.1    Seers, C.A.2    Tan, K.H.3    Reynolds, E.C.4
  • 32
    • 4143101682 scopus 로고    scopus 로고
    • Chemotaxis-guided movements in bacteria
    • Lux R, Shi W. 2004. Chemotaxis-guided movements in bacteria. Crit Rev Oral B i o l Med 1 5: 207-220. h t t p://d x. d o i. o r g/1 0. 1 1 7 7/154411130401500404.
    • (2004) Crit Rev Oral B i o l Med 1 , vol.5 , pp. 207-220
    • Lux, R.1    Shi, W.2
  • 33
    • 0034819849 scopus 로고    scopus 로고
    • Motility and chemotaxis in tissue penetration of oral epithelial cell layers by Treponema denticola
    • Lux R, Miller JN, Park NH, Shi W. 2001. Motility and chemotaxis in tissue penetration of oral epithelial cell layers by Treponema denticola. Infect Immun 69: 6276-6283. http://dx. doi. org/10. 1128/IAI. 69. 10. 6276-6283. 2001.
    • (2001) Infect Immun , vol.69 , pp. 6276-6283
    • Lux, R.1    Miller, J.N.2    Park, N.H.3    Shi, W.4
  • 36
    • 84862276328 scopus 로고    scopus 로고
    • Structure, function and diversity of the healthy human microbiome
    • The Human Microbiome Project Consortium. 2012. Structure, function and diversity of the healthy human microbiome. Nature 486: 207-214. http://dx. doi. org/10. 1038/nature11234.
    • (2012) Nature , vol.486 , pp. 207-214
  • 37
    • 0017194929 scopus 로고
    • Antony van Leeuwenhoek: Tercentenary of his discovery of bacteria
    • Porter JR. 1976. Antony van Leeuwenhoek: tercentenary of his discovery of bacteria. Bacteriol Rev 40: 260-269.
    • (1976) Bacteriol Rev , vol.40 , pp. 260-269
    • Porter, J.R.1
  • 38
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead B, Trapnell C, Pop M, Salzberg SL. 2009. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10: R25. http://dx. doi. org/10. 1186/gb-2009-10-3-r25.
    • (2009) Genome Biol , vol.10
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 41
    • 0027804103 scopus 로고
    • Non-parametric multivariate analyses of changes in community structure
    • Clarke KR. 1993. Non-parametric multivariate analyses of changes in community structure. Aust J Ecol 18: 117-143. http://dx. doi. org/10. 1111/j. 1442-9993. 1993. tb00438. x.
    • (1993) Aust J Ecol , vol.18 , pp. 117-143
    • Clarke, K.R.1
  • 43
    • 3142756502 scopus 로고    scopus 로고
    • Open source clustering software
    • De Hoon MJ, Imoto S, Nolan J, Miyano S. 2004. Open source clustering software. Bioinformatics 20: 1453-1454. http://dx. doi. org/10. 1093/bioinformatics/bth078.
    • (2004) Bioinformatics , vol.20 , pp. 1453-1454
    • De Hoon, M.J.1    Imoto, S.2    Nolan, J.3    Miyano, S.4
  • 44
    • 9444225935 scopus 로고    scopus 로고
    • Java Treeview-extensible visualization of microarray data
    • Saldanha AJ. 2004. Java Treeview-extensible visualization of microarray data. Bioinformatics 20: 3246-3248. http://dx. doi. org/10. 1093/bioinformatics/bth349.
    • (2004) Bioinformatics , vol.20 , pp. 3246-3248
    • Saldanha, A.J.1
  • 45
    • 79551587720 scopus 로고    scopus 로고
    • Cytoscape 2. 8: New features for data integration and network visualization
    • Smoot ME, Ono K, Ruscheinski J, Wang PL, Ideker T. 2011. Cytoscape 2. 8: new features for data integration and network visualization. Bioinformatics 27: 431-432. http://dx. doi. org/10. 1093/bioinformatics/btq675.
    • (2011) Bioinformatics , vol.27 , pp. 431-432
    • Smoot, M.E.1    Ono, K.2    Ruscheinski, J.3    Wang, P.L.4    Ideker, T.5
  • 48
    • 77957244650 scopus 로고    scopus 로고
    • Search and clustering orders of magnitude faster than BLAST
    • Edgar RC. 2010. Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26: 2460-2461. http://dx. doi. org/10. 1093/bioinformatics/btq461.
    • (2010) Bioinformatics , vol.26 , pp. 2460-2461
    • Edgar, R.C.1
  • 49
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y. 1995. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Stat Soc B Stat Methodol 57: 289-300.
    • (1995) J R Stat Soc B Stat Methodol , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.