Impact of three Illumina library construction methods on GC bias and HLA genotype calling

Human Immunology

Volumn 76, Issue 2-3, 2015, Pages 166-175

  Lan, James H ^a,b   Yin, Yuxin ^a   Reed, Elaine F ^a   Moua, Kevin ^a   Thomas, Kimberly ^a   Zhang, Qiuheng ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF BRITISH COLUMBIA   (Canada)

Author keywords

GC bias; HLA genotyping; Illumina Nextera; NGS; Transposase

Indexed keywords

HLA A ANTIGEN; HLA B ANTIGEN; HLA C ANTIGEN; HLA DQB1 ANTIGEN; HLA DRB1 ANTIGEN; TRANSPOSASE; HLA ANTIGEN;

ALLELE; ARTICLE; DNA BASE COMPOSITION; GENE INSERTION; GENE LIBRARY; GENOTYPE; HLA SYSTEM; HUMAN; NORMAL HUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SEQUENCE ALIGNMENT; COMPARATIVE STUDY; COST BENEFIT ANALYSIS; ECONOMICS; GENETICS; HIGH THROUGHPUT SEQUENCING; HISTOCOMPATIBILITY TEST; METABOLISM; PROCEDURES; REPRODUCIBILITY;

ALLELES; COST-BENEFIT ANALYSIS; GENE LIBRARY; GENOTYPE; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HISTOCOMPATIBILITY TESTING; HLA ANTIGENS; HUMANS; REPRODUCIBILITY OF RESULTS; TRANSPOSASES;

EID: 84924085837     PISSN: 01988859     EISSN: 18791166     Source Type: Journal    
DOI: 10.1016/j.humimm.2014.12.016     Document Type: Article

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