Transcriptome profiling shows gene regulation patterns in a flavonoid pathway in response to exogenous phenylalanine in Boesenbergia rotunda cell culture

BMC Genomics

Volumn 15, Issue 1, 2014, Pages

  Md Mustafa, Noor Diyana ^a,b   Khalid, Norzulaani ^a,b   Gao, Huan ^d   Peng, Zhiyu ^c,d   Alimin, Mohd Firdaus ^a   Bujang, Noraini ^a   Ming, Wong Sher ^a,b   Mohd Yusuf, Yusmin ^a   Harikrishna, Jennifer A ^a,b   Othman, Rofina Yasmin ^a,b  

^a UNIVERSITY OF MALAYA   (Malaysia)

^b UNIVERSITY OF MALAYA   (Malaysia)

^c BGI Guangzhou   (China)

^d BGI SHENZHEN   (China)

Author keywords

Anti dengue; Boesenbergia rotunda; Differentially expressed genes (DEGs) analysis; Panduratin A; Phenylpropanoid pathway; RNA seq

Indexed keywords

4 COUMAROYL COENZYME A LIGASE; ABC TRANSPORTER; BETA GLUCOSIDASE; BOESENBERGIA ROTUNDA EXTRACT; CHALCONE SYNTHASE; FLAVONOID; HISTONE DEMETHYLASE; LONG CHAIN FATTY ACID COENZYME A LIGASE; PANDURATIN A; PHENYLALANINE; PHENYLALANINE AMMONIA LYASE; PLANT EXTRACT; SHIKIMIC ACID; TRANSCRIPTION FACTOR; TRANSCRIPTOME; TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED FACTOR; UNCLASSIFIED DRUG; 4-HYDROXYPANDURATIN A; CHALCONE DERIVATIVE;

AMINO ACID METABOLISM; ANTIVIRAL ACTIVITY; ARTICLE; BOESENBERGIA ROTUNDA; CALLUS (PLANT); CARBOHYDRATE METABOLISM; CELL CULTURE; CELL SUSPENSION; CONTIG MAPPING; CONTROLLED STUDY; CULTIVAR; DIGITAL GENE EXPRESSION; DOWN REGULATION; DRUG ISOLATION; ENDOCYTOSIS; ENDOPLASMIC RETICULUM; ENERGY METABOLISM; GENE CONTROL; GENE EXPRESSION; GENE ONTOLOGY; GLUCONEOGENESIS; MEMBRANE TRANSPORT; NEXT GENERATION SEQUENCING; NITROGEN METABOLISM; NONHUMAN; PROTEIN DEGRADATION; PROTEIN FOLDING; PROTEIN FUNCTION; PROTEIN MODIFICATION; PROTEIN MOTIF; PROTEIN TARGETING; RNA PROCESSING; RNA SEQUENCE; SIGNAL TRANSDUCTION; TRANSCRIPTION REGULATION; UPREGULATION; ZINGIBERACEAE; BIOSYNTHESIS; CHEMISTRY; DENGUE; GENE EXPRESSION REGULATION; GENETICS; HIGH THROUGHPUT SEQUENCING; HUMAN; IN VITRO STUDY; METABOLISM; MOLECULAR GENETICS; PLANT GENOME;

BOESENBERGIA ROTUNDA; ZINGIBERACEAE;

CHALCONES; DENGUE; FLAVONOIDS; GENE EXPRESSION REGULATION, PLANT; GENOME, PLANT; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; IN VITRO TECHNIQUES; METABOLIC NETWORKS AND PATHWAYS; MOLECULAR SEQUENCE ANNOTATION; TRANSCRIPTOME; ZINGIBERACEAE;

EID: 84924085728     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-15-984     Document Type: Article

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