메뉴 건너뛰기




Volumn 9, Issue 3, 2015, Pages 592-602

Genetic indicators of iron limitation in wild populations of Thalassiosira oceanica from the northeast Pacific Ocean

Author keywords

[No Author keywords available]

Indexed keywords

DIATOM; GENE EXPRESSION; GENETIC VARIATION; GEOGRAPHICAL DISTRIBUTION; IDENTIFICATION KEY; NEW GENUS; NUTRITIONAL STATUS; WILD POPULATION;

EID: 84923545651     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2014.171     Document Type: Article
Times cited : (46)

References (38)
  • 1
    • 33644554134 scopus 로고    scopus 로고
    • Living diatom assemblages from North Pacific and Bering Sea surface waters during summer 1999
    • Aizawa C, Tanimoto M, Jordan R. (2005). Living diatom assemblages from North Pacific and Bering Sea surface waters during summer 1999. Deep Sea Res Part II 52: 2186-2205.
    • (2005) Deep Sea Res Part II , vol.52 , pp. 2186-2205
    • Aizawa, C.1    Tanimoto, M.2    Jordan, R.3
  • 4
    • 33846796262 scopus 로고    scopus 로고
    • Mesoscale iron enrichment experiments 1993-2005: Synthesis and future directions
    • Boyd PW, Jickells T, Law CS, Blain S, Boyle EA, Buesseler KO et al. (2007). Mesoscale iron enrichment experiments 1993-2005: synthesis and future directions. Science 315: 612-617.
    • (2007) Science , vol.315 , pp. 612-617
    • Boyd, P.W.1    Jickells, T.2    Law, C.S.3    Blain, S.4    Boyle, E.A.5    Buesseler, K.O.6
  • 5
    • 84885415529 scopus 로고    scopus 로고
    • Thalassioisra spp. Community composition shifts in response to chemical and physical forcing in the northeast Pacific Ocean
    • Chappell PD, Whitney LP, Haddock TL, Menden-Deuer S, Roy EG, Wells ML et al. (2013). Thalassioisra spp. community composition shifts in response to chemical and physical forcing in the northeast Pacific Ocean. Front Microbiol 4: 273.
    • (2013) Front Microbiol , vol.4 , Issue.273
    • Chappell, P.D.1    Whitney, L.P.2    Haddock, T.L.3    Menden-Deuer, S.4    Roy, E.G.5    Wells, M.L.6
  • 7
    • 0029839049 scopus 로고    scopus 로고
    • Quantitative analysis of iron-stress related proteins in Thalassiosira weissflogii: Measurement of flavodoxin and ferredoxin using HPLC
    • Doucette GJ, Erdner DL, Peleato ML, Hartman JJ, Anderson DM. (1996). Quantitative analysis of iron-stress related proteins in Thalassiosira weissflogii: measurement of flavodoxin and ferredoxin using HPLC. Mar Ecol Prog Ser 130: 269-276.
    • (1996) Mar Ecol Prog ser , vol.130 , pp. 269-276
    • Doucette, G.J.1    Erdner, D.L.2    Peleato, M.L.3    Hartman, J.J.4    Anderson, D.M.5
  • 9
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar RC. (2004). MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792-1797.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 10
    • 0032719562 scopus 로고    scopus 로고
    • Ferredoxin and flavodoxin as biochemical indicators of iron limitation during open-ocean iron enrichment
    • Erdner DL, Anderson DM. (1999). Ferredoxin and flavodoxin as biochemical indicators of iron limitation during open-ocean iron enrichment. Limnol Oceanogr 44: 1609-1615.
    • (1999) Limnol Oceanogr , vol.44 , pp. 1609-1615
    • Erdner, D.L.1    Anderson, D.M.2
  • 11
    • 0033612696 scopus 로고    scopus 로고
    • Characterization of ferredoxin and flavodoxin as markers of iron limitation in marine phytoplankton
    • Erdner DL, Price NM, Doucette GJ, Peleato ML, Anderson DM. (1999). Characterization of ferredoxin and flavodoxin as markers of iron limitation in marine phytoplankton. Mar Ecol Prog Ser 184: 43-53.
    • (1999) Mar Ecol Prog ser , vol.184 , pp. 43-53
    • Erdner, D.L.1    Price, N.M.2    Doucette, G.J.3    Peleato, M.L.4    Anderson, D.M.5
  • 12
    • 70350407811 scopus 로고    scopus 로고
    • Morphology and ecology of Thalassiosira Cleve (Bacillariophyta) species rarely recorded in Brazilian coastal waters
    • Garcia M, Odebrecht C. (2009). Morphology and ecology of Thalassiosira Cleve (Bacillariophyta) species rarely recorded in Brazilian coastal waters. Braz J Biol 69: 1059-1071.
    • (2009) Braz J Biol , vol.69 , pp. 1059-1071
    • Garcia, M.1    Odebrecht, C.2
  • 13
    • 0000968742 scopus 로고
    • Stichochrysis immobilis is a diatom, not a chyrsophyte
    • Guillard RRL, Hargraves PE. (1993). Stichochrysis immobilis is a diatom, not a chyrsophyte. Phycologia 32: 234-236.
    • (1993) Phycologia , vol.32 , pp. 234-236
    • Guillard, R.R.L.1    Hargraves, P.E.2
  • 14
    • 0029167977 scopus 로고
    • Thalassiosira species (Bacillariophyceae) from a Scotish sea-loch
    • Harris A, Medlin L, Lewis J, Jones K. (1995). Thalassiosira species (Bacillariophyceae) from a Scotish sea-loch. Eur J Phycol 30: 117-131.
    • (1995) Eur J Phycol , vol.30 , pp. 117-131
    • Harris, A.1    Medlin, L.2    Lewis, J.3    Jones, K.4
  • 15
    • 33645241687 scopus 로고    scopus 로고
    • Molecular phylogeny of selected members of the order Thalassiosirales (Bacillariophyta) and evolution of the fultoportula
    • Kaczmarska I, Beaton M, Benoit A, Medlin L. (2005). Molecular phylogeny of selected members of the order Thalassiosirales (Bacillariophyta) and evolution of the fultoportula. J Phycol 42: 121-138.
    • (2005) J Phycol , vol.42 , pp. 121-138
    • Kaczmarska, I.1    Beaton, M.2    Benoit, A.3    Medlin, L.4
  • 16
    • 84903286893 scopus 로고    scopus 로고
    • The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing
    • Keeling PJ, Burki F, Wilcox HM, Allam B, Allen EE, Amaral-Zettler LA et al. (2014). The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. PLoS Biol 12: e1001889.
    • (2014) PLoS Biol , vol.12 , pp. e1001889
    • Keeling, P.J.1    Burki, F.2    Wilcox, H.M.3    Allam, B.4    Allen, E.E.5    Amaral-Zettler, L.A.6
  • 17
    • 34547572323 scopus 로고    scopus 로고
    • Sequence analysis and transcriptional regulation of iron acquisition genes in two marine diatoms
    • Kustka AB, Allen AE, Morel FMM. (2007). Sequence analysis and transcriptional regulation of iron acquisition genes in two marine diatoms. J Phycol 43: 715-729.
    • (2007) J Phycol , vol.43 , pp. 715-729
    • Kustka, A.B.1    Allen, A.E.2    Morel, F.M.M.3
  • 18
    • 0001028792 scopus 로고
    • Flavodoxin expression as an indicator of iron limitation in marine diatoms
    • LaRoche J, Murray H, Orellana M, Newton J. (1995). Flavodoxin expression as an indicator of iron limitation in marine diatoms. J Phycol 31: 520-530.
    • (1995) J Phycol , vol.31 , pp. 520-530
    • Laroche, J.1    Murray, H.2    Orellana, M.3    Newton, J.4
  • 19
    • 0029756642 scopus 로고    scopus 로고
    • Flavodoxin as an in situ marker for iron stress in phytoplankton
    • LaRoche J, Boyd PW, McKay RML, Geider RJ. (1996). Flavodoxin as an in situ marker for iron stress in phytoplankton. Nature 382: 802-805.
    • (1996) Nature , vol.382 , pp. 802-805
    • Laroche, J.1    Boyd, P.W.2    McKay, R.M.L.3    Geider, R.J.4
  • 20
    • 84864139509 scopus 로고    scopus 로고
    • Genome and low-iron response of an oceanic diatom adapted to chronic iron limitation
    • Lommer M, Specht M, Roy AS, Kraemer L, Andreson R, Gutowska MA et al. (2012). Genome and low-iron response of an oceanic diatom adapted to chronic iron limitation. Genome Biol 13: R66.
    • (2012) Genome Biol , vol.13 , pp. R66
    • Lommer, M.1    Specht, M.2    Roy, A.S.3    Kraemer, L.4    Andreson, R.5    Gutowska, M.A.6
  • 21
    • 0035166645 scopus 로고    scopus 로고
    • Iron uptake and physiological response of phytoplankton during a mesoscale Southern Ocean iron enrichment
    • Maldonado MT, Boyd PW, LaRoche J, Strzepek R,Waite A, Bowie AR et al. (2001). Iron uptake and physiological response of phytoplankton during a mesoscale Southern Ocean iron enrichment. Limnol Oceanogr 46: 1802-1808.
    • (2001) Limnol Oceanogr , vol.46 , pp. 1802-1808
    • Maldonado, M.T.1    Boyd, P.W.2    Laroche, J.3    Strzepek, R.4    Waite, A.5    Bowie, A.R.6
  • 23
    • 84857134530 scopus 로고    scopus 로고
    • Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability
    • Marchetti A, Schruth DM, Durkin CA, ParkerMS, Kodner RB, Berthiaume CT et al. (2012). Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability. Proc Natl Acad Sci USA 109: E317-E325.
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. E317-E325
    • Marchetti, A.1    Schruth, D.M.2    Durkin, C.A.3    Parker, M.S.4    Kodner, R.B.5    Berthiaume, C.T.6
  • 24
    • 18144415055 scopus 로고
    • Iron-deficiency limits phytoplankton growth in the northeast Pacific subarctic
    • Martin JH, Fitzwater SE. (1988). Iron-deficiency limits phytoplankton growth in the northeast Pacific subarctic. Nature 331: 341-343.
    • (1988) Nature , vol.331 , pp. 341-343
    • Martin, J.H.1    Fitzwater, S.E.2
  • 25
    • 0031403563 scopus 로고    scopus 로고
    • Physiological and biochemical response of the photosynthetic apparatus of two marine diatoms to Fe stress
    • McKay RML, Geider RJ, LaRoche J. (1997). Physiological and biochemical response of the photosynthetic apparatus of two marine diatoms to Fe stress. Plant Physiol 114: 615-622.
    • (1997) Plant Physiol , vol.114 , pp. 615-622
    • McKay, R.M.L.1    Geider, R.J.2    Laroche, J.3
  • 26
    • 0033035180 scopus 로고    scopus 로고
    • Accumulation of ferredoxin and flavodoxin in a marine diatom in response to Fe
    • McKay RML, La Roche J, Yakunin AF, Durnford DG, Geider RJ. (1999). Accumulation of ferredoxin and flavodoxin in a marine diatom in response to Fe. J Phycol 35: 510-519.
    • (1999) J Phycol , vol.35 , pp. 510-519
    • McKay, R.M.L.1    La Roche, J.2    Yakunin, A.F.3    Durnford, D.G.4    Geider, R.J.5
  • 27
    • 15944385225 scopus 로고    scopus 로고
    • Upper ocean ecosystem dynamics and iron cycling in a global threedimensional model
    • Moore JK, Doney SC, Lindsay K. (2004). Upper ocean ecosystem dynamics and iron cycling in a global threedimensional model. Global Biogeochem Cy 18: 21.
    • (2004) Global Biogeochem Cy , vol.18 , Issue.21
    • Moore, J.K.1    Doney, S.C.2    Lindsay, K.3
  • 30
    • 38749120912 scopus 로고    scopus 로고
    • Persistence of iron(II) in surface waters of the western subarctic Pacific
    • Roy EG, Wells ML, King DW. (2008). Persistence of iron(II) in surface waters of the western subarctic Pacific. Limnol Oceanogr 53: 89-98.
    • (2008) Limnol Oceanogr , vol.53 , pp. 89-98
    • Roy, E.G.1    Wells, M.L.2    King, D.W.3
  • 32
    • 0029529293 scopus 로고
    • Iron uptake and growth limitation in oceanic and coastal phytoplankton
    • Sunda WG, Huntsman SA. (1995). Iron uptake and growth limitation in oceanic and coastal phytoplankton. Mar Chem 50: 189-206.
    • (1995) Mar Chem , vol.50 , pp. 189-206
    • Sunda, W.G.1    Huntsman, S.A.2
  • 33
    • 70749084306 scopus 로고    scopus 로고
    • Community structure and photosynthetic physiology of phytoplankton in the northwest subarctic Pacific during an in situ iron fertilization experiment (SEEDS-II)
    • Suzuki K, Saito H, Isada T, Hattori-Saito A, Kiyosawa H, Nishioka J et al. (2009). Community structure and photosynthetic physiology of phytoplankton in the northwest subarctic Pacific during an in situ iron fertilization experiment (SEEDS-II). Deep Sea Res Part II 56: 2733-2744.
    • (2009) Deep Sea Res Part II , vol.56 , pp. 2733-2744
    • Suzuki, K.1    Saito, H.2    Isada, T.3    Hattori-Saito, A.4    Kiyosawa, H.5    Nishioka, J.6
  • 34
    • 80455122815 scopus 로고    scopus 로고
    • Whole-genome expression analysis reveals a role for death-related genes in stress acclimation of the diatom Thalassiosira pseudonana
    • Thamatrakoln K, Korenovska O, Niheu AK, Bidle KD. (2012). Whole-genome expression analysis reveals a role for death-related genes in stress acclimation of the diatom Thalassiosira pseudonana. Environ Microbiol 14: 67-81.
    • (2012) Environ Microbiol , vol.14 , pp. 67-81
    • Thamatrakoln, K.1    Korenovska, O.2    Niheu, A.K.3    Bidle, K.D.4
  • 36
    • 0036821716 scopus 로고    scopus 로고
    • Structure of Haida Eddies and their transport of nutrient from coastal margins into the NE Pacific Ocean
    • Whitney F, Robert M. (2002). Structure of Haida Eddies and their transport of nutrient from coastal margins into the NE Pacific Ocean. J Oceanogr 58: 715-723.
    • (2002) J Oceanogr , vol.58 , pp. 715-723
    • Whitney, F.1    Robert, M.2
  • 37
    • 84864944295 scopus 로고    scopus 로고
    • Characterization of putative iron responsive genes as species-specific indicators of iron stress in Thalassiosiroid diatoms
    • Whitney LP, Lins JJ, Hughes MP, Wells ML, Chappell PD, Jenkins BD. (2011). Characterization of putative iron responsive genes as species-specific indicators of iron stress in Thalassiosiroid diatoms. Front Microbiol 2: 234.
    • (2011) Front Microbiol , vol.2 , pp. 234
    • Whitney, L.P.1    Lins, J.J.2    Hughes, M.P.3    Wells, M.L.4    Chappell, P.D.5    Jenkins, B.D.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.