메뉴 건너뛰기




Volumn 5, Issue , 2014, Pages

The microbiome of New World vultures

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL TOXIN;

EID: 84923370755     PISSN: None     EISSN: 20411723     Source Type: Journal    
DOI: 10.1038/ncomms6498     Document Type: Article
Times cited : (245)

References (43)
  • 1
    • 0041852244 scopus 로고    scopus 로고
    • Beyond the grave-understanding human decomposition
    • Vass, A. A. Beyond the grave-understanding human decomposition. Microbiol. Today 28, 190-193 (2001).
    • (2001) Microbiol. Today , vol.28 , pp. 190-193
    • Vass, A.A.1
  • 2
    • 0000419040 scopus 로고
    • The role of avian carcasses in botulism epizootics
    • Reed, T. M. & Rocke, T. E. The role of avian carcasses in botulism epizootics. Wildl. Soc. Bull. 20, 175-182 (1992).
    • (1992) Wildl. Soc. Bull. , vol.20 , pp. 175-182
    • Reed, T.M.1    Rocke, T.E.2
  • 3
    • 65349166342 scopus 로고    scopus 로고
    • Taphonomic effects of vulture scavenging
    • Reeves, N. M. Taphonomic effects of vulture scavenging. J Forensic Sci. 54, 523-528 (2009).
    • (2009) J Forensic Sci. , vol.54 , pp. 523-528
    • Reeves, N.M.1
  • 4
    • 84863229206 scopus 로고    scopus 로고
    • Botulinum neurotoxin is shielded by NTNHA in an interlocked complex
    • Gu, S. et al. Botulinum neurotoxin is shielded by NTNHA in an interlocked complex. Science 335, 977-981 (2002).
    • (2002) Science , vol.335 , pp. 977-981
    • Gu, S.1
  • 5
    • 0016530918 scopus 로고
    • The digestive tract of the whiteback griffon vulture and its role in disease transmission among wild ungulates
    • Houston, D. C. & Cooper, J. The digestive tract of the whiteback griffon vulture and its role in disease transmission among wild ungulates. J. Wildl. Dis. 11, 306-313 (1975).
    • (1975) J. Wildl. Dis. , vol.11 , pp. 306-313
    • Houston, D.C.1    Cooper, J.2
  • 6
    • 84859583189 scopus 로고    scopus 로고
    • Blocking human contaminant DNA during PCR allows amplification of rare mammal species from sedimentary ancient DNA
    • Boessenkool, S. et al. Blocking human contaminant DNA during PCR allows amplification of rare mammal species from sedimentary ancient DNA. Mol. Ecol. 21, 1806-1815 (2012).
    • (2012) Mol. Ecol. , vol.21 , pp. 1806-1815
    • Boessenkool, S.1
  • 7
    • 84873083988 scopus 로고    scopus 로고
    • Carrion fly-derived DNA as a tool for comprehensive and cost-effective assessment of mammalian biodiversity
    • Calvignac-Spencer, S. et al. Carrion fly-derived DNA as a tool for comprehensive and cost-effective assessment of mammalian biodiversity. Mol. Ecol. 22, 915-924 (2013).
    • (2013) Mol. Ecol. , vol.22 , pp. 915-924
    • Calvignac-Spencer, S.1
  • 8
    • 84890204190 scopus 로고    scopus 로고
    • Metabarcoding avian diets at airports: Implications for birdstrike hazard management planning
    • Coghlan, M. L. et al. Metabarcoding avian diets at airports: implications for birdstrike hazard management planning. Investig. Genet. 4, 27 (2013).
    • (2013) Investig. Genet. , vol.4 , pp. 27
    • Coghlan, M.L.1
  • 9
    • 84862276328 scopus 로고    scopus 로고
    • Structure, function and diversity of the healthy human microbiome
    • Human Microbiome Project, C.. Structure, function and diversity of the healthy human microbiome. Nature 486, 207-214 (2012).
    • (2012) Nature , vol.486 , pp. 207-214
    • Human Microbiome Project, C..,1
  • 10
    • 84896963128 scopus 로고    scopus 로고
    • The living dead: Bacterial community structure of a cadaver at the onset and end of the bloat stage of decomposition
    • Hyde, E. R. et al. The living dead: Bacterial community structure of a cadaver at the onset and end of the bloat stage of decomposition. PLoS ONE 8, e77733 (2013).
    • (2013) PLoS ONE , vol.8 , pp. e77733
    • Hyde, E.R.1
  • 12
    • 84857117741 scopus 로고    scopus 로고
    • Co-habiting amphibian species harbor unique skin bacterial communities in wild populations
    • McKenzie, V. J. et al. Co-habiting amphibian species harbor unique skin bacterial communities in wild populations. ISME J. 6, 588-596 (2012).
    • (2012) ISME J. , vol.6 , pp. 588-596
    • McKenzie, V.J.1
  • 13
    • 80052851309 scopus 로고    scopus 로고
    • Diversity of the human skin microbiome early in life
    • Capone, K. A. et al. Diversity of the human skin microbiome early in life. J. Invest. Dermatol. 131, 2026-2032 (2011).
    • (2011) J. Invest. Dermatol. , vol.131 , pp. 2026-2032
    • Capone, K.A.1
  • 14
    • 46249085739 scopus 로고    scopus 로고
    • Evolution of mammals and their gut microbes
    • Ley, R. E. et al. Evolution of mammals and their gut microbes. Science 320, 1647-1651 (2008).
    • (2008) Science , vol.320 , pp. 1647-1651
    • Ley, R.E.1
  • 15
    • 84892828465 scopus 로고    scopus 로고
    • Diet rapidly and reproducibly alters the human gut microbiome
    • David, L. A. et al. Diet rapidly and reproducibly alters the human gut microbiome. Nature 505, 559-563 (2013).
    • (2013) Nature , vol.505 , pp. 559-563
    • David, L.A.1
  • 16
    • 84885357221 scopus 로고    scopus 로고
    • The alligator gut microbiome and implications for archosaur symbioses
    • Keenan, S. W., Engel, A. S. & Elsey, R. M. The alligator gut microbiome and implications for archosaur symbioses. Sci. Rep. 3, 2877 (2013).
    • (2013) Sci. Rep. , vol.3 , pp. 2877
    • Keenan, S.W.1    Engel, A.S.2    Elsey, R.M.3
  • 17
    • 84923322449 scopus 로고    scopus 로고
    • (ed Baron, S.) Medical Microbiology. 4, Ch. 18 (University of Texas Medical Branch at Galveston
    • Wells, C. L. & Clostridia, W. T. Sporeforming anaerobic Bacilli. (ed Baron, S.) Medical Microbiology. 4, Ch. 18 (University of Texas Medical Branch at Galveston, 1996).
    • (1996) Sporeforming Anaerobic Bacilli
    • Wells, C.L.1    Clostridia, W.T.2
  • 18
    • 84879095218 scopus 로고    scopus 로고
    • Epidemiology of foodborne disease outbreaks caused by Clostridium perfringens, United States, 1998-2010
    • Grass, J. E., Gould, L. H. & Mahon, B. E. Epidemiology of foodborne disease outbreaks caused by Clostridium perfringens, United States, 1998-2010. Foodborne Pathog. Dis. 10, 131-136 (2013).
    • (2013) Foodborne Pathog. Dis. , vol.10 , pp. 131-136
    • Grass, J.E.1    Gould, L.H.2    Mahon, B.E.3
  • 19
    • 11144347036 scopus 로고    scopus 로고
    • Clostridium perfringens in poultry: An emerging threat for animal and public health
    • Van Immerseel, F. et al. Clostridium perfringens in poultry: an emerging threat for animal and public health. Avian Pathol. 33, 537-549 (2004).
    • (2004) Avian Pathol. , vol.33 , pp. 537-549
    • Van Immerseel, F.1
  • 20
    • 0021413695 scopus 로고
    • An outbreak of botulism in waterfowl and fly larvae in New York State
    • Shayegani, M., Stone, W. B. & Hannett, G. E. An outbreak of botulism in waterfowl and fly larvae in New York State. J. Wildl. Dis. 20, 86-89 (1984).
    • (1984) J. Wildl. Dis. , vol.20 , pp. 86-89
    • Shayegani, M.1    Stone, W.B.2    Hannett, G.E.3
  • 21
    • 0034962010 scopus 로고    scopus 로고
    • Disease emergence in birds: Challenges for the twenty-first century
    • Friend, M., McLean, R. G. & Dein, F. J. Disease emergence in birds: challenges for the twenty-first century. Auk 118, 290-303 (2001).
    • (2001) Auk , vol.118 , pp. 290-303
    • Friend, M.1    McLean, R.G.2    Dein, F.J.3
  • 22
    • 84882334105 scopus 로고    scopus 로고
    • Fusobacterium nucleatum promotes colorectal carcinogenesis by modulating E-Cadherin/b-Catenin signaling via its FadA adhesin
    • Rubinstein, M. R. et al. Fusobacterium nucleatum promotes colorectal carcinogenesis by modulating E-Cadherin/b-Catenin signaling via its FadA adhesin. Cell Host Microbe 14, 195-206 (2013).
    • (2013) Cell Host Microbe , vol.14 , pp. 195-206
    • Rubinstein, M.R.1
  • 23
    • 84882354326 scopus 로고    scopus 로고
    • Fusobacterium nucleatum potentiates intestinal tumorigenesis and modulates the tumor-immune microenvironment
    • Kostic, A. D. et al. Fusobacterium nucleatum potentiates intestinal tumorigenesis and modulates the tumor-immune microenvironment. Cell Host Microbe 14, 207-215 (2013).
    • (2013) Cell Host Microbe , vol.14 , pp. 207-215
    • Kostic, A.D.1
  • 24
    • 0018369552 scopus 로고
    • Antibodies to Clostridium botulinum toxins in free-living birds and mammals
    • Ohishi, I. et al. Antibodies to Clostridium botulinum toxins in free-living birds and mammals. J. Wildl. Dis. 15, 3-9 (1979).
    • (1979) J. Wildl. Dis. , vol.15 , pp. 3-9
    • Ohishi, I.1
  • 25
    • 84891585929 scopus 로고    scopus 로고
    • The gut microbiome modulates colon tumorigenesis
    • Zackular, J. P. et al. The gut microbiome modulates colon tumorigenesis. MBio 4, e00692-13 (2013).
    • (2013) MBio , vol.4 , pp. e00692-e00713
    • Zackular, J.P.1
  • 26
    • 0029687530 scopus 로고    scopus 로고
    • Reproducibility of ancient DNA sequences from extinct Pleistocene fauna
    • Taylor, P. G. Reproducibility of ancient DNA sequences from extinct Pleistocene fauna. Mol. Biol. Evol. 13, 283-285 (1996).
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 283-285
    • Taylor, P.G.1
  • 27
    • 49749128451 scopus 로고    scopus 로고
    • Blocking primers to enhance PCR amplification of rare sequences in mixed samples-A case study on prey DNA in Antarctic krill stomachs
    • Vestheim, H. & Jarman, S. N. Blocking primers to enhance PCR amplification of rare sequences in mixed samples-a case study on prey DNA in Antarctic krill stomachs. Front. Zool. 5, 12 (2008).
    • (2008) Front. Zool. , vol.5 , pp. 12
    • Vestheim, H.1    Jarman, S.N.2
  • 28
    • 84863101693 scopus 로고    scopus 로고
    • AdapterRemoval: Easy cleaning of next-generation sequencing reads
    • Lindgreen, S. AdapterRemoval: easy cleaning of next-generation sequencing reads. BMC Res. Notes 5, 337 (2012).
    • (2012) BMC Res. Notes , vol.5 , pp. 337
    • Lindgreen, S.1
  • 29
    • 77957244650 scopus 로고    scopus 로고
    • Search and clustering orders of magnitude faster than BLAST
    • Edgar, R. C. Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26, 2460-2461 (2010).
    • (2010) Bioinformatics , vol.26 , pp. 2460-2461
    • Edgar, R.C.1
  • 30
    • 84866386969 scopus 로고    scopus 로고
    • Early life treatment with vancomycin propagates Akkermansia muciniphila and reduces diabetes incidence in the NOD mouse
    • Hansen, C. H. F. et al. Early life treatment with vancomycin propagates Akkermansia muciniphila and reduces diabetes incidence in the NOD mouse. Diabetologia 55, 2285-2294 (2012).
    • (2012) Diabetologia , vol.55 , pp. 2285-2294
    • Hansen, C.H.F.1
  • 31
    • 77952243141 scopus 로고    scopus 로고
    • Qime allows analysis of high-throughput community sequencing data
    • Caporaso, J. G. et al. Qime allows analysis of high-throughput community sequencing data. Nat. Methods 7, 335-336 (2010).
    • (2010) Nat. Methods , vol.7 , pp. 335-336
    • Caporaso, J.G.1
  • 32
    • 79961181125 scopus 로고    scopus 로고
    • Uchime improves sensitivity and speed of chimera detection
    • Edgar, R. C. et al. Uchime improves sensitivity and speed of chimera detection. Bioinformatics 27, 2194-2200 (2011).
    • (2011) Bioinformatics , vol.27 , pp. 2194-2200
    • Edgar, R.C.1
  • 34
    • 34548293679 scopus 로고    scopus 로고
    • Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
    • Wang, Q. et al. Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl. Environ. Microbiol. 73, 5261-5267 (2007).
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 5261-5267
    • Wang, Q.1
  • 35
    • 33746061683 scopus 로고    scopus 로고
    • Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
    • DeSantis, T. Z. et al. Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl. Environ. Microbiol. 72, 5069-5072 (2006).
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 5069-5072
    • Desantis, T.Z.1
  • 37
    • 84855949949 scopus 로고    scopus 로고
    • Using network analysis to explore co-occurrence patterns in soil microbial communities
    • Barberan, A. et al. Using network analysis to explore co-occurrence patterns in soil microbial communities. ISME J. 6, 343-351 (2012).
    • (2012) ISME J. , vol.6 , pp. 343-351
    • Barberan, A.1
  • 38
    • 84864579031 scopus 로고    scopus 로고
    • Microbial co-occurrence relationships in the human microbiome
    • Faust, K. et al. Microbial co-occurrence relationships in the human microbiome. PLoS Comput. Biol. 8, e1002606 (2012).
    • (2012) PLoS Comput. Biol. , vol.8 , pp. e1002606
    • Faust, K.1
  • 39
    • 84869054051 scopus 로고    scopus 로고
    • A travel guide to Cytoscape plugins
    • Saito, R. et al. A travel guide to Cytoscape plugins. Nat. Methods 9, 1069-1076 (2012).
    • (2012) Nat. Methods , vol.9 , pp. 1069-1076
    • Saito, R.1
  • 40
    • 80255127234 scopus 로고    scopus 로고
    • Cutadapt removes adapter sequences from high-throughput sequencing reads
    • Martin, M. Cutadapt removes adapter sequences from high-throughput sequencing reads. EMBnet J. 17, 10-12 (2011).
    • (2011) EMBnet J. , vol.17 , pp. 10-12
    • Martin, M.1
  • 41
    • 84987886949 scopus 로고    scopus 로고
    • The avian phylogenomic project data
    • in press.
    • Zhang, G. et al. The avian phylogenomic project data. GigaScience Database. in press.
    • GigaScience Database
    • Zhang, G.1
  • 42
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li, H. & Durbin, R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25, 1754-1760 (2009).
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.