Automated structural comparisons clarify the phylogeny of the right-hand-shaped polymerases

Molecular Biology and Evolution

Volumn 31, Issue 10, 2014, Pages 2741-2752

  Mönttinen, Heli A M ^a   Ravantti, Janne J ^a,b   Stuart, David I ^c,d   Poranen, Minna M ^a  

^a UNIVERSITY OF HELSINKI   (Finland)

^b UNIVERSITY OF HELSINKI   (Finland)

^c UNIVERSITY OF OXFORD   (United Kingdom)

^d DIAMOND LIGHT SOURCE LTD   (United Kingdom)

Author keywords

nucleic acid polymerase; protein evolution; structural alignment; structural classification

Indexed keywords

AMINO ACID; DNA DIRECTED DNA POLYMERASE BETA; DNA POLYMERASE; RNA POLYMERASE; ASPARTIC ACID; BACTERIAL PROTEIN; DNA DIRECTED DNA POLYMERASE; VIRUS PROTEIN;

ARCHAEON; ARTICLE; AUTOMATION; CATALYSIS; COMPARATIVE STUDY; ESCHERICHIA COLI; EUKARYOTE; HORIZONTAL GENE TRANSFER; NONHUMAN; PHYLOGENY; POLYMERIZATION; REVERSE TRANSCRIPTION; RNA STRUCTURE; STRUCTURAL GENE; SULFOLOBUS SOLFATARICUS; AMINO ACID SEQUENCE; BACTERIUM; BIOLOGY; CHEMICAL STRUCTURE; CHEMISTRY; ENZYME ACTIVE SITE; ENZYMOLOGY; GENETICS; LABORATORY AUTOMATION; METABOLISM; MOLECULAR EVOLUTION; NUCLEOTIDE SEQUENCE; PROCEDURES; VIRUS;

ESCHERICHIA COLI; EUKARYOTA; SULFOLOBUS SOLFATARICUS;

AMINO ACID SEQUENCE; ASPARTIC ACID; AUTOMATION, LABORATORY; BACTERIA; BACTERIAL PROTEINS; CATALYTIC DOMAIN; COMPUTATIONAL BIOLOGY; CONSERVED SEQUENCE; DNA-DIRECTED DNA POLYMERASE; EVOLUTION, MOLECULAR; GENE TRANSFER, HORIZONTAL; MODELS, MOLECULAR; PHYLOGENY; VIRAL PROTEINS; VIRUSES;

EID: 84923073842     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msu219     Document Type: Article

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