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Volumn 105, Issue 2, 2015, Pages 76-82

Genome-wide identification of RNA editing in hepatocellular carcinoma

Author keywords

Hepatocellular carcinoma; RNA editing; RNA Seq

Indexed keywords

ARTICLE; CANCER GROWTH; CLINICAL ARTICLE; CONTROLLED STUDY; DNA MODIFICATION; GENE EXPRESSION; GENE IDENTIFICATION; GENE LOCATION; GENE SEQUENCE; GENETIC ASSOCIATION; GENETIC CODE; GENETIC TRANSCRIPTION; GENETIC VARIABILITY; HUMAN; HUMAN CELL; HUMAN TISSUE; LIVER CELL CARCINOMA; RNA EDITING; SEQUENCE ALIGNMENT; BIOLOGY; GENETICS; GENOME; LIVER TUMOR; PROCEDURES; SEQUENCE ANALYSIS;

EID: 84922733768     PISSN: 08887543     EISSN: 10898646     Source Type: Journal    
DOI: 10.1016/j.ygeno.2014.11.005     Document Type: Article
Times cited : (27)

References (38)
  • 2
    • 77952293063 scopus 로고    scopus 로고
    • Functions and regulation of RNA editing by ADAR deaminases
    • Nishikura K. Functions and regulation of RNA editing by ADAR deaminases. Annu. Rev. Biochem. 2010, 79:321-349.
    • (2010) Annu. Rev. Biochem. , vol.79 , pp. 321-349
    • Nishikura, K.1
  • 3
    • 79952460585 scopus 로고    scopus 로고
    • Gene regulation through RNA editing
    • Maas S. Gene regulation through RNA editing. Discov. Med. 2010, 10:379-386.
    • (2010) Discov. Med. , vol.10 , pp. 379-386
    • Maas, S.1
  • 5
  • 6
    • 0037014475 scopus 로고    scopus 로고
    • A-to-I editing: new and old sites, functions and speculations
    • Seeburg P.H. A-to-I editing: new and old sites, functions and speculations. Neuron 2002, 35:17-20.
    • (2002) Neuron , vol.35 , pp. 17-20
    • Seeburg, P.H.1
  • 9
  • 11
  • 13
    • 79952936198 scopus 로고    scopus 로고
    • Computational detection and functional analysis of human tissue-specific A-to-I RNA editing
    • He T., Wang Q., Feng G., Hu Y., Wang L., Wang Y. Computational detection and functional analysis of human tissue-specific A-to-I RNA editing. PLoS One 2011, 6:18129.
    • (2011) PLoS One , vol.6 , pp. 18129
    • He, T.1    Wang, Q.2    Feng, G.3    Hu, Y.4    Wang, L.5    Wang, Y.6
  • 15
    • 10944271858 scopus 로고    scopus 로고
    • A survey of RNA editing in human brain
    • Blow M. A survey of RNA editing in human brain. Genome Res. 2004, 14:2379-2387.
    • (2004) Genome Res. , vol.14 , pp. 2379-2387
    • Blow, M.1
  • 18
    • 84861970552 scopus 로고    scopus 로고
    • Li JB: accurate identification of human Alu and non-Alu RNA editing sites
    • Ramaswami G., Lin W., Piskol R., Tan M.H., Davis C. Li JB: accurate identification of human Alu and non-Alu RNA editing sites. Nat. Methods 2012, 9:579-581.
    • (2012) Nat. Methods , vol.9 , pp. 579-581
    • Ramaswami, G.1    Lin, W.2    Piskol, R.3    Tan, M.H.4    Davis, C.5
  • 20
    • 11144280578 scopus 로고    scopus 로고
    • Identification and validation of commonly overexpressed genes in solid tumors by comparison of microarray data
    • Pilarsky C., Wenzig M., Specht T., Saeger H.D., Grutzmann R. Identification and validation of commonly overexpressed genes in solid tumors by comparison of microarray data. Neoplasia 2004, 6:744-750.
    • (2004) Neoplasia , vol.6 , pp. 744-750
    • Pilarsky, C.1    Wenzig, M.2    Specht, T.3    Saeger, H.D.4    Grutzmann, R.5
  • 21
    • 0036196462 scopus 로고    scopus 로고
    • Increased RNA editing and inhibition of hepatitis delta virus replication by high-level expression of ADAR1 and ADAR2
    • Jayan G.C., Casey J.L. Increased RNA editing and inhibition of hepatitis delta virus replication by high-level expression of ADAR1 and ADAR2. J. Virol. 2002, 76:3819-3827.
    • (2002) J. Virol. , vol.76 , pp. 3819-3827
    • Jayan, G.C.1    Casey, J.L.2
  • 22
    • 84855320189 scopus 로고    scopus 로고
    • Accurate identification of A-to-I RNA editing in human by transcriptome sequencing
    • Bahn J.H., Lee J.H., Li G., Greer C., Peng G., Xiao X. Accurate identification of A-to-I RNA editing in human by transcriptome sequencing. Genome Res. 2012, 22:142-150.
    • (2012) Genome Res. , vol.22 , pp. 142-150
    • Bahn, J.H.1    Lee, J.H.2    Li, G.3    Greer, C.4    Peng, G.5    Xiao, X.6
  • 23
  • 24
    • 84872186385 scopus 로고    scopus 로고
    • Lack of evidence for existence of noncanonical RNA editing
    • Piskol R., Peng Z., Wang J., Li J.B. Lack of evidence for existence of noncanonical RNA editing. Nat. Biotechnol. 2013, 31:19-20.
    • (2013) Nat. Biotechnol. , vol.31 , pp. 19-20
    • Piskol, R.1    Peng, Z.2    Wang, J.3    Li, J.B.4
  • 26
    • 0031884265 scopus 로고    scopus 로고
    • Cathepsin B and human tumor progression
    • Yan S., Sameni M., Sloane B.F. Cathepsin B and human tumor progression. Biol. Chem. 1998, 379:113-123.
    • (1998) Biol. Chem. , vol.379 , pp. 113-123
    • Yan, S.1    Sameni, M.2    Sloane, B.F.3
  • 27
    • 0031882595 scopus 로고    scopus 로고
    • Cathepsin B expression and its correlation with tumor-associated laminin and tumor progression in gastric cancer
    • Khan A., Krishna M., Baker S.P., Malhothra R., Banner B.F. Cathepsin B expression and its correlation with tumor-associated laminin and tumor progression in gastric cancer. Arch. Pathol. Lab. Med. 1998, 122:172-177.
    • (1998) Arch. Pathol. Lab. Med. , vol.122 , pp. 172-177
    • Khan, A.1    Krishna, M.2    Baker, S.P.3    Malhothra, R.4    Banner, B.F.5
  • 29
    • 1542495341 scopus 로고    scopus 로고
    • Cathepsin B and its role(s) in cancer progression
    • Podgorski I., Sloane B.F. Cathepsin B and its role(s) in cancer progression. Biochem. Soc. Symp. 2003, 263-276.
    • (2003) Biochem. Soc. Symp.
    • Podgorski, I.1    Sloane, B.F.2
  • 30
    • 77954505224 scopus 로고    scopus 로고
    • DARNED: a DAtabase of RNa EDiting in humans
    • Kiran A., Baranov P.V. DARNED: a DAtabase of RNa EDiting in humans. Bioinformatics 2010, 26:1772-1776.
    • (2010) Bioinformatics , vol.26 , pp. 1772-1776
    • Kiran, A.1    Baranov, P.V.2
  • 31
    • 0035158285 scopus 로고    scopus 로고
    • Urinary excretion of trypsinogen activation peptide (TAP) in taurocholate-induced pancreatitis in rats
    • Wang Y., Naruse S., Kitagawa M., Ishiguro H., Nakae Y., Hayakawa T. Urinary excretion of trypsinogen activation peptide (TAP) in taurocholate-induced pancreatitis in rats. Pancreas 2001, 22:24-27.
    • (2001) Pancreas , vol.22 , pp. 24-27
    • Wang, Y.1    Naruse, S.2    Kitagawa, M.3    Ishiguro, H.4    Nakae, Y.5    Hayakawa, T.6
  • 33
    • 0033558107 scopus 로고    scopus 로고
    • Expression of the IL-12 receptor beta 1 and beta 2 subunits in human tuberculosis
    • Zhang M., Gong J., Presky D.H., Xue W., Barnes P.F. Expression of the IL-12 receptor beta 1 and beta 2 subunits in human tuberculosis. J. Immunol. 1999, 162:2441-2447.
    • (1999) J. Immunol. , vol.162 , pp. 2441-2447
    • Zhang, M.1    Gong, J.2    Presky, D.H.3    Xue, W.4    Barnes, P.F.5
  • 34
    • 68149165614 scopus 로고    scopus 로고
    • Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm
    • Kumar P., Henikoff S., Ng P.C. Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm. Nat. Protoc. 2009, 4:1073-1081.
    • (2009) Nat. Protoc. , vol.4 , pp. 1073-1081
    • Kumar, P.1    Henikoff, S.2    Ng, P.C.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.