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Volumn 28, Issue , 2015, Pages 159-168

Metabolic transistor strategy for controlling electron transfer chain activity in Escherichia coli

Author keywords

Electron transfer chain; Escherichia coli; Lactate; Metabolic transistor; Oxygen; Quinone

Indexed keywords

BIOSYNTHESIS; CHAINS; ELECTRON TRANSITIONS; ELECTRONS; ESCHERICHIA COLI; OXYGEN; REACTION INTERMEDIATES; SYNTHESIS (CHEMICAL); TRANSISTORS;

EID: 84922250583     PISSN: 10967176     EISSN: 10967184     Source Type: Journal    
DOI: 10.1016/j.ymben.2015.01.002     Document Type: Article
Times cited : (21)

References (33)
  • 1
    • 22844452835 scopus 로고    scopus 로고
    • Construction of lycopene-overproducing E. coli strains by combining systematic and combinatorial gene knockout targets
    • Alper H., Miyaoku K., Stephanopoulos G. Construction of lycopene-overproducing E. coli strains by combining systematic and combinatorial gene knockout targets. Nat. Biotechnol. 2005, 23(5):612-616.
    • (2005) Nat. Biotechnol. , vol.23 , Issue.5 , pp. 612-616
    • Alper, H.1    Miyaoku, K.2    Stephanopoulos, G.3
  • 3
    • 84899694320 scopus 로고    scopus 로고
    • Principles of genetic circuit design
    • Brophy J.A., Voigt C.A. Principles of genetic circuit design. Nat. Methods 2014, 11(5):508-520.
    • (2014) Nat. Methods , vol.11 , Issue.5 , pp. 508-520
    • Brophy, J.A.1    Voigt, C.A.2
  • 4
    • 0017807890 scopus 로고
    • Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid
    • Chang A.C.Y., Cohen S.N. Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid. J. Bacteriol. 1978, 134:1141-1156.
    • (1978) J. Bacteriol. , vol.134 , pp. 1141-1156
    • Chang, A.C.Y.1    Cohen, S.N.2
  • 5
    • 0028485650 scopus 로고
    • Molecular structure and enzymatic function of lycopene cyclase from the cyanobacterium Synechococcus sp strain PCC7942
    • Cunningham F.X., Sun Z., Chamovitz D., Hirschberg J., Gantt E. Molecular structure and enzymatic function of lycopene cyclase from the cyanobacterium Synechococcus sp strain PCC7942. Plant Cell 1994, 6:1107-1121.
    • (1994) Plant Cell , vol.6 , pp. 1107-1121
    • Cunningham, F.X.1    Sun, Z.2    Chamovitz, D.3    Hirschberg, J.4    Gantt, E.5
  • 6
    • 0034612342 scopus 로고    scopus 로고
    • One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
    • Datsenko K.A., Wanner B.L. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl. Acad. Sci. USA 2000, 97(12):6640-6645.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , Issue.12 , pp. 6640-6645
    • Datsenko, K.A.1    Wanner, B.L.2
  • 7
    • 23344450789 scopus 로고    scopus 로고
    • Characterization of the acetate-producing pathways in Escherichia coli
    • Dittrich C.R., Bennett G.N., San K.Y. Characterization of the acetate-producing pathways in Escherichia coli. Biotechnol. Prog. 2005, 21:1062-1067.
    • (2005) Biotechnol. Prog. , vol.21 , pp. 1062-1067
    • Dittrich, C.R.1    Bennett, G.N.2    San, K.Y.3
  • 8
    • 0034024497 scopus 로고    scopus 로고
    • Improving lycopene production in Escherichia coli by engineering metabolic control
    • Farmer W.R., Liao J.C. Improving lycopene production in Escherichia coli by engineering metabolic control. Nat. Biotechnol. 2000, 18(5):533-537.
    • (2000) Nat. Biotechnol. , vol.18 , Issue.5 , pp. 533-537
    • Farmer, W.R.1    Liao, J.C.2
  • 9
    • 0000598585 scopus 로고    scopus 로고
    • Respiration
    • ASM PRESS, Washington, DC, F.C. Neidhardt, R. Curtiss, J.I. Ingraham, E.C.C. Lin, K.B. Low, B. Magasanik, W.S. Reznikiff, M. Riley, M. Schaechter, H.E. Umbarger (Eds.)
    • Gennis R.B., Stewart V. Respiration. Escherichia coli and Salmonella: Cellular and Molecular Biology, vol. 1, second ed. 1996, 217-253. ASM PRESS, Washington, DC. F.C. Neidhardt, R. Curtiss, J.I. Ingraham, E.C.C. Lin, K.B. Low, B. Magasanik, W.S. Reznikiff, M. Riley, M. Schaechter, H.E. Umbarger (Eds.).
    • (1996) Escherichia coli and Salmonella: Cellular and Molecular Biology, vol. 1, second ed. , pp. 217-253
    • Gennis, R.B.1    Stewart, V.2
  • 11
    • 0029018327 scopus 로고
    • Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter
    • Guzman L.M., Belin D., Carson M.J., Beckwith J. Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter. J. Bacteriol. 1995, 177:4121-4130.
    • (1995) J. Bacteriol. , vol.177 , pp. 4121-4130
    • Guzman, L.M.1    Belin, D.2    Carson, M.J.3    Beckwith, J.4
  • 12
    • 84866184240 scopus 로고    scopus 로고
    • Respiratory chain analysis of Zymomonas mobilis mutants producing high levels of ethanol
    • Hayashi T., Kato T., Furukawa K. Respiratory chain analysis of Zymomonas mobilis mutants producing high levels of ethanol. Appl. Environ. Microbiol. 2012, 78(16):5622-5629.
    • (2012) Appl. Environ. Microbiol. , vol.78 , Issue.16 , pp. 5622-5629
    • Hayashi, T.1    Kato, T.2    Furukawa, K.3
  • 13
    • 0025972739 scopus 로고
    • Pyruvate-formate-lyase-deactivase and acetyl-CoA reductase activities of Escherichia coli reside on a polymeric protein particle encoded by adhE
    • Kessler D., Leibrecht I., Knappe J. Pyruvate-formate-lyase-deactivase and acetyl-CoA reductase activities of Escherichia coli reside on a polymeric protein particle encoded by adhE. FEBS Lett. 1991, 281(1-2):59-63.
    • (1991) FEBS Lett. , vol.281 , Issue.1-2 , pp. 59-63
    • Kessler, D.1    Leibrecht, I.2    Knappe, J.3
  • 14
    • 84875957826 scopus 로고    scopus 로고
    • Conversion of Corynebacterium glutamicum from an aerobic respiring to an aerobic fermenting bacterium by inactivation of the respiratory chain
    • Koch-Koerfges A., Pfelzer N., Platzen L., Oldiges M., Bott M. Conversion of Corynebacterium glutamicum from an aerobic respiring to an aerobic fermenting bacterium by inactivation of the respiratory chain. Biochim. Biophys. Acta 2013, 1827(6):699-708.
    • (2013) Biochim. Biophys. Acta , vol.1827 , Issue.6 , pp. 699-708
    • Koch-Koerfges, A.1    Pfelzer, N.2    Platzen, L.3    Oldiges, M.4    Bott, M.5
  • 15
    • 55949095380 scopus 로고    scopus 로고
    • Biosynthesis of ubiquinone compounds with conjugated prenyl side chains
    • Lee P.C., Salomon C., Mijts B., Schmidt-Dannert C. Biosynthesis of ubiquinone compounds with conjugated prenyl side chains. Appl. Environ. Microbiol. 2008, 74(22):6908-6917.
    • (2008) Appl. Environ. Microbiol. , vol.74 , Issue.22 , pp. 6908-6917
    • Lee, P.C.1    Salomon, C.2    Mijts, B.3    Schmidt-Dannert, C.4
  • 16
    • 0017157812 scopus 로고
    • Membrane-associated reactions in ubiquinone biosynthesis in Escherichia coli. 3-Octaprenyl-4-hydroxybenzoate carboxy-lyase
    • Leppik R.A., Young I.G., Gibson F. Membrane-associated reactions in ubiquinone biosynthesis in Escherichia coli. 3-Octaprenyl-4-hydroxybenzoate carboxy-lyase. Biochim. Biophys. Acta 1976, 436(4):800-810.
    • (1976) Biochim. Biophys. Acta , vol.436 , Issue.4 , pp. 800-810
    • Leppik, R.A.1    Young, I.G.2    Gibson, F.3
  • 17
    • 15944366483 scopus 로고    scopus 로고
    • Effect of oxygen on the Escherichia coli ArcA and FNR regulation systems and metabolic responses
    • Levanon S.S., San K.Y., Bennett G.N. Effect of oxygen on the Escherichia coli ArcA and FNR regulation systems and metabolic responses. Biotechnol. Bioeng. 2005, 89(5):556-564.
    • (2005) Biotechnol. Bioeng. , vol.89 , Issue.5 , pp. 556-564
    • Levanon, S.S.1    San, K.Y.2    Bennett, G.N.3
  • 18
    • 12744254193 scopus 로고    scopus 로고
    • Genetic reconstruction of the aerobic central metabolism in Escherichia coli for the absolute aerobic production of succinate
    • Lin H., Bennett G.N., San K.Y. Genetic reconstruction of the aerobic central metabolism in Escherichia coli for the absolute aerobic production of succinate. Biotechnol. Bioeng. 2005, 89:148-156.
    • (2005) Biotechnol. Bioeng. , vol.89 , pp. 148-156
    • Lin, H.1    Bennett, G.N.2    San, K.Y.3
  • 20
    • 84890178034 scopus 로고    scopus 로고
    • Advances in genetic circuit design: novel biochemistries, deep part mining, and precision gene expression
    • Nielsen A.A., Segall-Shapiro T.H., Voigt C.A. Advances in genetic circuit design: novel biochemistries, deep part mining, and precision gene expression. Curr. Opin. Chem. Biol. 2013, 17(6):878-892.
    • (2013) Curr. Opin. Chem. Biol. , vol.17 , Issue.6 , pp. 878-892
    • Nielsen, A.A.1    Segall-Shapiro, T.H.2    Voigt, C.A.3
  • 21
    • 84878232870 scopus 로고    scopus 로고
    • Homogeneous purification and characterization of LePGT1-a membrane-bound aromatic substrate prenyltransferase involved in secondary metabolism of Lithospermum erythrorhizon
    • Ohara K., Mito K., Yazaki K. Homogeneous purification and characterization of LePGT1-a membrane-bound aromatic substrate prenyltransferase involved in secondary metabolism of Lithospermum erythrorhizon. FEBS J. 2013, 280(11):2572-2580.
    • (2013) FEBS J. , vol.280 , Issue.11 , pp. 2572-2580
    • Ohara, K.1    Mito, K.2    Yazaki, K.3
  • 22
    • 67650898865 scopus 로고    scopus 로고
    • Functional characterization of LePGT1, a membrane-bound prenyltransferase involved in the geranylation of p-hydroxybenzoic acid
    • Ohara K., Muroya A., Fukushima N., Yazaki.K. Functional characterization of LePGT1, a membrane-bound prenyltransferase involved in the geranylation of p-hydroxybenzoic acid. Biochem. J. 2009, 421(2):231-241.
    • (2009) Biochem. J. , vol.421 , Issue.2 , pp. 231-241
    • Ohara, K.1    Muroya, A.2    Fukushima, N.3    Yazaki, K.4
  • 23
    • 84897954571 scopus 로고    scopus 로고
    • Characterizing bacterial gene circuit dynamics with optically programmed gene expression signals
    • Olson E.J., Hartsough L.A., Landry B.P., Shroff R., Tabor J.J. Characterizing bacterial gene circuit dynamics with optically programmed gene expression signals. Nat. Methods 2014, 11(4):449-455.
    • (2014) Nat. Methods , vol.11 , Issue.4 , pp. 449-455
    • Olson, E.J.1    Hartsough, L.A.2    Landry, B.P.3    Shroff, R.4    Tabor, J.J.5
  • 24
    • 57449102586 scopus 로고    scopus 로고
    • Aerobic fermentation of d-glucose by an evolved cytochrome oxidase-deficient Escherichia coli strain
    • Portnoy V.A., Herrgård M.J., Palsson B.Ø. Aerobic fermentation of d-glucose by an evolved cytochrome oxidase-deficient Escherichia coli strain. Appl. Environ. Microbiol. 2008, 74(24):7561-7569.
    • (2008) Appl. Environ. Microbiol. , vol.74 , Issue.24 , pp. 7561-7569
    • Portnoy, V.A.1    Herrgård, M.J.2    Palsson, B.Ø.3
  • 25
    • 78049253925 scopus 로고    scopus 로고
    • Deletion of genes encoding cytochrome oxidases and quinol monooxygenase blocks the aerobic-anaerobic shift in Escherichia coli K-12 MG1655
    • Portnoy V.A., Scott D.A., Lewis N.E., Tarasova Y., Osterman A.L., Palsson B.Ø. Deletion of genes encoding cytochrome oxidases and quinol monooxygenase blocks the aerobic-anaerobic shift in Escherichia coli K-12 MG1655. Appl. Environ. Microbiol. 2010, 76(19):6529-6540.
    • (2010) Appl. Environ. Microbiol. , vol.76 , Issue.19 , pp. 6529-6540
    • Portnoy, V.A.1    Scott, D.A.2    Lewis, N.E.3    Tarasova, Y.4    Osterman, A.L.5    Palsson, B.Ø.6
  • 26
    • 26644446232 scopus 로고    scopus 로고
    • Enhanced lycopene productivity by manipulation of carbon flow to isopentenyl diphosphate in Escherichia coli
    • Vadali R.V., Fu Y., Bennett G.N., San K.Y. Enhanced lycopene productivity by manipulation of carbon flow to isopentenyl diphosphate in Escherichia coli. Biotechnol. Prog. 2005, 21(5):1558-1561.
    • (2005) Biotechnol. Prog. , vol.21 , Issue.5 , pp. 1558-1561
    • Vadali, R.V.1    Fu, Y.2    Bennett, G.N.3    San, K.Y.4
  • 27
    • 0034741279 scopus 로고    scopus 로고
    • YfiD of Escherichia coli and Y061 of bacteriophage T4 as autonomous glycyl radical cofactors reconstituting the catalytic center of oxygen-fragmented pyruvate formate-lyase
    • Wagner A.F.V., Schulz S., Bomke J., Pils T., Lehmann W.D., Knappe J. YfiD of Escherichia coli and Y061 of bacteriophage T4 as autonomous glycyl radical cofactors reconstituting the catalytic center of oxygen-fragmented pyruvate formate-lyase. Biochem. Biophys. Res. Commun. 2001, 285:456-462.
    • (2001) Biochem. Biophys. Res. Commun. , vol.285 , pp. 456-462
    • Wagner, A.F.V.1    Schulz, S.2    Bomke, J.3    Pils, T.4    Lehmann, W.D.5    Knappe, J.6
  • 28
    • 0036231445 scopus 로고    scopus 로고
    • Expression of the Escherichia coli yfiD gene responds to intracellular pH and reduces the accumulation of acidic metabolic end products
    • Wyborn N.R., Messenger S.L., Henderson R.A., Sawers G., Roberts R.E., Attwood M.M., Green J. Expression of the Escherichia coli yfiD gene responds to intracellular pH and reduces the accumulation of acidic metabolic end products. Microbiology 2002, 148:1015-1026.
    • (2002) Microbiology , vol.148 , pp. 1015-1026
    • Wyborn, N.R.1    Messenger, S.L.2    Henderson, R.A.3    Sawers, G.4    Roberts, R.E.5    Attwood, M.M.6    Green, J.7
  • 29
    • 0037155212 scopus 로고    scopus 로고
    • Geranyl diphosphate:4-hydroxybenzoate geranyltransferase from Lithospermum erythrorhizon. Cloning and characterization of a ket enzyme in shikonin biosynthesis
    • Yazaki K., Kunihisa M., Fujisaki T., Sato F. Geranyl diphosphate:4-hydroxybenzoate geranyltransferase from Lithospermum erythrorhizon. Cloning and characterization of a ket enzyme in shikonin biosynthesis. J. Biol. Chem. 2002, 277(8):6240-6246.
    • (2002) J. Biol. Chem. , vol.277 , Issue.8 , pp. 6240-6246
    • Yazaki, K.1    Kunihisa, M.2    Fujisaki, T.3    Sato, F.4
  • 30
    • 0033759208 scopus 로고    scopus 로고
    • Identification of the ubiD gene on the Escherichia coli chromosome
    • Zhang H.T., Javor G.T. Identification of the ubiD gene on the Escherichia coli chromosome. J. Bacteriol. 2000, 182(21):6243-6246.
    • (2000) J. Bacteriol. , vol.182 , Issue.21 , pp. 6243-6246
    • Zhang, H.T.1    Javor, G.T.2
  • 31
    • 80555122766 scopus 로고    scopus 로고
    • Manipulating respiratory levels in Escherichia coli for aerobic formation of reduced chemical products
    • Zhu J., Sánchez A., Bennett G.N., San K.Y. Manipulating respiratory levels in Escherichia coli for aerobic formation of reduced chemical products. Metab. Eng. 2011, 13(6):704-712.
    • (2011) Metab. Eng. , vol.13 , Issue.6 , pp. 704-712
    • Zhu, J.1    Sánchez, A.2    Bennett, G.N.3    San, K.Y.4
  • 32
    • 34247522694 scopus 로고    scopus 로고
    • The YfiD protein contributes to the pyruvate formate-lyase flux in an Escherichia coli arcA mutant strain
    • Zhu J., Shalel-Levanon S., Bennett G., San K.Y. The YfiD protein contributes to the pyruvate formate-lyase flux in an Escherichia coli arcA mutant strain. Biotechnol. Bioeng. 2007, 97(1):138-143.
    • (2007) Biotechnol. Bioeng. , vol.97 , Issue.1 , pp. 138-143
    • Zhu, J.1    Shalel-Levanon, S.2    Bennett, G.3    San, K.Y.4
  • 33
    • 2442545374 scopus 로고    scopus 로고
    • The effect of pfl gene knockout on the metabolism for optically pure d-lactate production by Escherichia coli
    • Zhu J., Shimizu K. The effect of pfl gene knockout on the metabolism for optically pure d-lactate production by Escherichia coli. Appl. Microbiol. Biotechnol. 2004, 64(3):367-375.
    • (2004) Appl. Microbiol. Biotechnol. , vol.64 , Issue.3 , pp. 367-375
    • Zhu, J.1    Shimizu, K.2


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