-
1
-
-
22844452835
-
Construction of lycopene-overproducing E. coli strains by combining systematic and combinatorial gene knockout targets
-
Alper H., Miyaoku K., Stephanopoulos G. Construction of lycopene-overproducing E. coli strains by combining systematic and combinatorial gene knockout targets. Nat. Biotechnol. 2005, 23(5):612-616.
-
(2005)
Nat. Biotechnol.
, vol.23
, Issue.5
, pp. 612-616
-
-
Alper, H.1
Miyaoku, K.2
Stephanopoulos, G.3
-
2
-
-
84901842133
-
Biosynthesis and physiology of coenzyme Q in bacteria
-
Aussel L., Pierrel F., Loiseau L., Lombard M., Fontecave M., Barras F. Biosynthesis and physiology of coenzyme Q in bacteria. Biochim. Biophys. Acta 2014, 1837(7):1004-1011.
-
(2014)
Biochim. Biophys. Acta
, vol.1837
, Issue.7
, pp. 1004-1011
-
-
Aussel, L.1
Pierrel, F.2
Loiseau, L.3
Lombard, M.4
Fontecave, M.5
Barras, F.6
-
3
-
-
84899694320
-
Principles of genetic circuit design
-
Brophy J.A., Voigt C.A. Principles of genetic circuit design. Nat. Methods 2014, 11(5):508-520.
-
(2014)
Nat. Methods
, vol.11
, Issue.5
, pp. 508-520
-
-
Brophy, J.A.1
Voigt, C.A.2
-
4
-
-
0017807890
-
Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid
-
Chang A.C.Y., Cohen S.N. Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid. J. Bacteriol. 1978, 134:1141-1156.
-
(1978)
J. Bacteriol.
, vol.134
, pp. 1141-1156
-
-
Chang, A.C.Y.1
Cohen, S.N.2
-
5
-
-
0028485650
-
Molecular structure and enzymatic function of lycopene cyclase from the cyanobacterium Synechococcus sp strain PCC7942
-
Cunningham F.X., Sun Z., Chamovitz D., Hirschberg J., Gantt E. Molecular structure and enzymatic function of lycopene cyclase from the cyanobacterium Synechococcus sp strain PCC7942. Plant Cell 1994, 6:1107-1121.
-
(1994)
Plant Cell
, vol.6
, pp. 1107-1121
-
-
Cunningham, F.X.1
Sun, Z.2
Chamovitz, D.3
Hirschberg, J.4
Gantt, E.5
-
6
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko K.A., Wanner B.L. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl. Acad. Sci. USA 2000, 97(12):6640-6645.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, Issue.12
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
7
-
-
23344450789
-
Characterization of the acetate-producing pathways in Escherichia coli
-
Dittrich C.R., Bennett G.N., San K.Y. Characterization of the acetate-producing pathways in Escherichia coli. Biotechnol. Prog. 2005, 21:1062-1067.
-
(2005)
Biotechnol. Prog.
, vol.21
, pp. 1062-1067
-
-
Dittrich, C.R.1
Bennett, G.N.2
San, K.Y.3
-
8
-
-
0034024497
-
Improving lycopene production in Escherichia coli by engineering metabolic control
-
Farmer W.R., Liao J.C. Improving lycopene production in Escherichia coli by engineering metabolic control. Nat. Biotechnol. 2000, 18(5):533-537.
-
(2000)
Nat. Biotechnol.
, vol.18
, Issue.5
, pp. 533-537
-
-
Farmer, W.R.1
Liao, J.C.2
-
9
-
-
0000598585
-
Respiration
-
ASM PRESS, Washington, DC, F.C. Neidhardt, R. Curtiss, J.I. Ingraham, E.C.C. Lin, K.B. Low, B. Magasanik, W.S. Reznikiff, M. Riley, M. Schaechter, H.E. Umbarger (Eds.)
-
Gennis R.B., Stewart V. Respiration. Escherichia coli and Salmonella: Cellular and Molecular Biology, vol. 1, second ed. 1996, 217-253. ASM PRESS, Washington, DC. F.C. Neidhardt, R. Curtiss, J.I. Ingraham, E.C.C. Lin, K.B. Low, B. Magasanik, W.S. Reznikiff, M. Riley, M. Schaechter, H.E. Umbarger (Eds.).
-
(1996)
Escherichia coli and Salmonella: Cellular and Molecular Biology, vol. 1, second ed.
, pp. 217-253
-
-
Gennis, R.B.1
Stewart, V.2
-
10
-
-
35748939100
-
The role of UbiX in Escherichia coli coenzyme Q biosynthesis
-
Gulmezian M., Hyman K.R., Marbois B.N., Clarke C.F., Javor G.T. The role of UbiX in Escherichia coli coenzyme Q biosynthesis. Arch. Biochem. Biophys. 2007, 467(2):144-153.
-
(2007)
Arch. Biochem. Biophys.
, vol.467
, Issue.2
, pp. 144-153
-
-
Gulmezian, M.1
Hyman, K.R.2
Marbois, B.N.3
Clarke, C.F.4
Javor, G.T.5
-
11
-
-
0029018327
-
Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter
-
Guzman L.M., Belin D., Carson M.J., Beckwith J. Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter. J. Bacteriol. 1995, 177:4121-4130.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 4121-4130
-
-
Guzman, L.M.1
Belin, D.2
Carson, M.J.3
Beckwith, J.4
-
12
-
-
84866184240
-
Respiratory chain analysis of Zymomonas mobilis mutants producing high levels of ethanol
-
Hayashi T., Kato T., Furukawa K. Respiratory chain analysis of Zymomonas mobilis mutants producing high levels of ethanol. Appl. Environ. Microbiol. 2012, 78(16):5622-5629.
-
(2012)
Appl. Environ. Microbiol.
, vol.78
, Issue.16
, pp. 5622-5629
-
-
Hayashi, T.1
Kato, T.2
Furukawa, K.3
-
13
-
-
0025972739
-
Pyruvate-formate-lyase-deactivase and acetyl-CoA reductase activities of Escherichia coli reside on a polymeric protein particle encoded by adhE
-
Kessler D., Leibrecht I., Knappe J. Pyruvate-formate-lyase-deactivase and acetyl-CoA reductase activities of Escherichia coli reside on a polymeric protein particle encoded by adhE. FEBS Lett. 1991, 281(1-2):59-63.
-
(1991)
FEBS Lett.
, vol.281
, Issue.1-2
, pp. 59-63
-
-
Kessler, D.1
Leibrecht, I.2
Knappe, J.3
-
14
-
-
84875957826
-
Conversion of Corynebacterium glutamicum from an aerobic respiring to an aerobic fermenting bacterium by inactivation of the respiratory chain
-
Koch-Koerfges A., Pfelzer N., Platzen L., Oldiges M., Bott M. Conversion of Corynebacterium glutamicum from an aerobic respiring to an aerobic fermenting bacterium by inactivation of the respiratory chain. Biochim. Biophys. Acta 2013, 1827(6):699-708.
-
(2013)
Biochim. Biophys. Acta
, vol.1827
, Issue.6
, pp. 699-708
-
-
Koch-Koerfges, A.1
Pfelzer, N.2
Platzen, L.3
Oldiges, M.4
Bott, M.5
-
15
-
-
55949095380
-
Biosynthesis of ubiquinone compounds with conjugated prenyl side chains
-
Lee P.C., Salomon C., Mijts B., Schmidt-Dannert C. Biosynthesis of ubiquinone compounds with conjugated prenyl side chains. Appl. Environ. Microbiol. 2008, 74(22):6908-6917.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, Issue.22
, pp. 6908-6917
-
-
Lee, P.C.1
Salomon, C.2
Mijts, B.3
Schmidt-Dannert, C.4
-
16
-
-
0017157812
-
Membrane-associated reactions in ubiquinone biosynthesis in Escherichia coli. 3-Octaprenyl-4-hydroxybenzoate carboxy-lyase
-
Leppik R.A., Young I.G., Gibson F. Membrane-associated reactions in ubiquinone biosynthesis in Escherichia coli. 3-Octaprenyl-4-hydroxybenzoate carboxy-lyase. Biochim. Biophys. Acta 1976, 436(4):800-810.
-
(1976)
Biochim. Biophys. Acta
, vol.436
, Issue.4
, pp. 800-810
-
-
Leppik, R.A.1
Young, I.G.2
Gibson, F.3
-
17
-
-
15944366483
-
Effect of oxygen on the Escherichia coli ArcA and FNR regulation systems and metabolic responses
-
Levanon S.S., San K.Y., Bennett G.N. Effect of oxygen on the Escherichia coli ArcA and FNR regulation systems and metabolic responses. Biotechnol. Bioeng. 2005, 89(5):556-564.
-
(2005)
Biotechnol. Bioeng.
, vol.89
, Issue.5
, pp. 556-564
-
-
Levanon, S.S.1
San, K.Y.2
Bennett, G.N.3
-
18
-
-
12744254193
-
Genetic reconstruction of the aerobic central metabolism in Escherichia coli for the absolute aerobic production of succinate
-
Lin H., Bennett G.N., San K.Y. Genetic reconstruction of the aerobic central metabolism in Escherichia coli for the absolute aerobic production of succinate. Biotechnol. Bioeng. 2005, 89:148-156.
-
(2005)
Biotechnol. Bioeng.
, vol.89
, pp. 148-156
-
-
Lin, H.1
Bennett, G.N.2
San, K.Y.3
-
20
-
-
84890178034
-
Advances in genetic circuit design: novel biochemistries, deep part mining, and precision gene expression
-
Nielsen A.A., Segall-Shapiro T.H., Voigt C.A. Advances in genetic circuit design: novel biochemistries, deep part mining, and precision gene expression. Curr. Opin. Chem. Biol. 2013, 17(6):878-892.
-
(2013)
Curr. Opin. Chem. Biol.
, vol.17
, Issue.6
, pp. 878-892
-
-
Nielsen, A.A.1
Segall-Shapiro, T.H.2
Voigt, C.A.3
-
21
-
-
84878232870
-
Homogeneous purification and characterization of LePGT1-a membrane-bound aromatic substrate prenyltransferase involved in secondary metabolism of Lithospermum erythrorhizon
-
Ohara K., Mito K., Yazaki K. Homogeneous purification and characterization of LePGT1-a membrane-bound aromatic substrate prenyltransferase involved in secondary metabolism of Lithospermum erythrorhizon. FEBS J. 2013, 280(11):2572-2580.
-
(2013)
FEBS J.
, vol.280
, Issue.11
, pp. 2572-2580
-
-
Ohara, K.1
Mito, K.2
Yazaki, K.3
-
22
-
-
67650898865
-
Functional characterization of LePGT1, a membrane-bound prenyltransferase involved in the geranylation of p-hydroxybenzoic acid
-
Ohara K., Muroya A., Fukushima N., Yazaki.K. Functional characterization of LePGT1, a membrane-bound prenyltransferase involved in the geranylation of p-hydroxybenzoic acid. Biochem. J. 2009, 421(2):231-241.
-
(2009)
Biochem. J.
, vol.421
, Issue.2
, pp. 231-241
-
-
Ohara, K.1
Muroya, A.2
Fukushima, N.3
Yazaki, K.4
-
23
-
-
84897954571
-
Characterizing bacterial gene circuit dynamics with optically programmed gene expression signals
-
Olson E.J., Hartsough L.A., Landry B.P., Shroff R., Tabor J.J. Characterizing bacterial gene circuit dynamics with optically programmed gene expression signals. Nat. Methods 2014, 11(4):449-455.
-
(2014)
Nat. Methods
, vol.11
, Issue.4
, pp. 449-455
-
-
Olson, E.J.1
Hartsough, L.A.2
Landry, B.P.3
Shroff, R.4
Tabor, J.J.5
-
24
-
-
57449102586
-
Aerobic fermentation of d-glucose by an evolved cytochrome oxidase-deficient Escherichia coli strain
-
Portnoy V.A., Herrgård M.J., Palsson B.Ø. Aerobic fermentation of d-glucose by an evolved cytochrome oxidase-deficient Escherichia coli strain. Appl. Environ. Microbiol. 2008, 74(24):7561-7569.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, Issue.24
, pp. 7561-7569
-
-
Portnoy, V.A.1
Herrgård, M.J.2
Palsson, B.Ø.3
-
25
-
-
78049253925
-
Deletion of genes encoding cytochrome oxidases and quinol monooxygenase blocks the aerobic-anaerobic shift in Escherichia coli K-12 MG1655
-
Portnoy V.A., Scott D.A., Lewis N.E., Tarasova Y., Osterman A.L., Palsson B.Ø. Deletion of genes encoding cytochrome oxidases and quinol monooxygenase blocks the aerobic-anaerobic shift in Escherichia coli K-12 MG1655. Appl. Environ. Microbiol. 2010, 76(19):6529-6540.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, Issue.19
, pp. 6529-6540
-
-
Portnoy, V.A.1
Scott, D.A.2
Lewis, N.E.3
Tarasova, Y.4
Osterman, A.L.5
Palsson, B.Ø.6
-
26
-
-
26644446232
-
Enhanced lycopene productivity by manipulation of carbon flow to isopentenyl diphosphate in Escherichia coli
-
Vadali R.V., Fu Y., Bennett G.N., San K.Y. Enhanced lycopene productivity by manipulation of carbon flow to isopentenyl diphosphate in Escherichia coli. Biotechnol. Prog. 2005, 21(5):1558-1561.
-
(2005)
Biotechnol. Prog.
, vol.21
, Issue.5
, pp. 1558-1561
-
-
Vadali, R.V.1
Fu, Y.2
Bennett, G.N.3
San, K.Y.4
-
27
-
-
0034741279
-
YfiD of Escherichia coli and Y061 of bacteriophage T4 as autonomous glycyl radical cofactors reconstituting the catalytic center of oxygen-fragmented pyruvate formate-lyase
-
Wagner A.F.V., Schulz S., Bomke J., Pils T., Lehmann W.D., Knappe J. YfiD of Escherichia coli and Y061 of bacteriophage T4 as autonomous glycyl radical cofactors reconstituting the catalytic center of oxygen-fragmented pyruvate formate-lyase. Biochem. Biophys. Res. Commun. 2001, 285:456-462.
-
(2001)
Biochem. Biophys. Res. Commun.
, vol.285
, pp. 456-462
-
-
Wagner, A.F.V.1
Schulz, S.2
Bomke, J.3
Pils, T.4
Lehmann, W.D.5
Knappe, J.6
-
28
-
-
0036231445
-
Expression of the Escherichia coli yfiD gene responds to intracellular pH and reduces the accumulation of acidic metabolic end products
-
Wyborn N.R., Messenger S.L., Henderson R.A., Sawers G., Roberts R.E., Attwood M.M., Green J. Expression of the Escherichia coli yfiD gene responds to intracellular pH and reduces the accumulation of acidic metabolic end products. Microbiology 2002, 148:1015-1026.
-
(2002)
Microbiology
, vol.148
, pp. 1015-1026
-
-
Wyborn, N.R.1
Messenger, S.L.2
Henderson, R.A.3
Sawers, G.4
Roberts, R.E.5
Attwood, M.M.6
Green, J.7
-
29
-
-
0037155212
-
Geranyl diphosphate:4-hydroxybenzoate geranyltransferase from Lithospermum erythrorhizon. Cloning and characterization of a ket enzyme in shikonin biosynthesis
-
Yazaki K., Kunihisa M., Fujisaki T., Sato F. Geranyl diphosphate:4-hydroxybenzoate geranyltransferase from Lithospermum erythrorhizon. Cloning and characterization of a ket enzyme in shikonin biosynthesis. J. Biol. Chem. 2002, 277(8):6240-6246.
-
(2002)
J. Biol. Chem.
, vol.277
, Issue.8
, pp. 6240-6246
-
-
Yazaki, K.1
Kunihisa, M.2
Fujisaki, T.3
Sato, F.4
-
30
-
-
0033759208
-
Identification of the ubiD gene on the Escherichia coli chromosome
-
Zhang H.T., Javor G.T. Identification of the ubiD gene on the Escherichia coli chromosome. J. Bacteriol. 2000, 182(21):6243-6246.
-
(2000)
J. Bacteriol.
, vol.182
, Issue.21
, pp. 6243-6246
-
-
Zhang, H.T.1
Javor, G.T.2
-
31
-
-
80555122766
-
Manipulating respiratory levels in Escherichia coli for aerobic formation of reduced chemical products
-
Zhu J., Sánchez A., Bennett G.N., San K.Y. Manipulating respiratory levels in Escherichia coli for aerobic formation of reduced chemical products. Metab. Eng. 2011, 13(6):704-712.
-
(2011)
Metab. Eng.
, vol.13
, Issue.6
, pp. 704-712
-
-
Zhu, J.1
Sánchez, A.2
Bennett, G.N.3
San, K.Y.4
-
32
-
-
34247522694
-
The YfiD protein contributes to the pyruvate formate-lyase flux in an Escherichia coli arcA mutant strain
-
Zhu J., Shalel-Levanon S., Bennett G., San K.Y. The YfiD protein contributes to the pyruvate formate-lyase flux in an Escherichia coli arcA mutant strain. Biotechnol. Bioeng. 2007, 97(1):138-143.
-
(2007)
Biotechnol. Bioeng.
, vol.97
, Issue.1
, pp. 138-143
-
-
Zhu, J.1
Shalel-Levanon, S.2
Bennett, G.3
San, K.Y.4
-
33
-
-
2442545374
-
The effect of pfl gene knockout on the metabolism for optically pure d-lactate production by Escherichia coli
-
Zhu J., Shimizu K. The effect of pfl gene knockout on the metabolism for optically pure d-lactate production by Escherichia coli. Appl. Microbiol. Biotechnol. 2004, 64(3):367-375.
-
(2004)
Appl. Microbiol. Biotechnol.
, vol.64
, Issue.3
, pp. 367-375
-
-
Zhu, J.1
Shimizu, K.2
|