메뉴 건너뛰기




Volumn 10, Issue 1, 2015, Pages 169-187

An improved toolbox to unravel the plant cellular machinery by tandem affinity purification of Arabidopsis protein complexes

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS PROTEIN; AFFINITY LABELING; CARRIER PROTEIN; IMMUNOGLOBULIN G; MULTIPROTEIN COMPLEX;

EID: 84921019018     PISSN: 17542189     EISSN: 17502799     Source Type: Journal    
DOI: 10.1038/nprot.2014.199     Document Type: Article
Times cited : (119)

References (66)
  • 3
    • 84857780876 scopus 로고    scopus 로고
    • Arabidopsis Interactome Mapping Consortium: Evidence for network evolution in an Arabidopsis interactome map
    • Arabidopsis Interactome Mapping Consortium. Evidence for network evolution in an Arabidopsis interactome map. Science 333, 601-607 (2011).
    • (2011) Science , vol.333 , pp. 601-607
  • 4
    • 34249826038 scopus 로고    scopus 로고
    • Purification of a plant mediator from Arabidopsis thaliana identifies PFT1 as the Med25 subunit
    • Backstrom, S., Elfving, N., Nilsson, R., Wingsle, G., Bjorklund, S. Purification of a plant mediator from Arabidopsis thaliana identifies PFT1 as the Med25 subunit. Mol. Cell 26, 717-729 (2007).
    • (2007) Mol. Cell , vol.26 , pp. 717-729
    • Backstrom, S.1    Elfving, N.2    Nilsson, R.3    Wingsle, G.4    Bjorklund, S.5
  • 5
    • 0037050004 scopus 로고    scopus 로고
    • Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry
    • Ho, Y. et al. Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature 415, 180-183 (2002).
    • (2002) Nature , vol.415 , pp. 180-183
    • Ho, Y.1
  • 6
    • 7044279162 scopus 로고    scopus 로고
    • Rapid one-step protein purification from plant material using the eight-amino acid StrepII epitope
    • Witte, C.P., Noel, L.D., Gielbert, J., Parker, J.E., Romeis, T. Rapid one-step protein purification from plant material using the eight-amino acid StrepII epitope. Plant Mol. Biol. 55, 135-147 (2004).
    • (2004) Plant Mol. Biol , vol.55 , pp. 135-147
    • Witte, C.P.1    Noel, L.D.2    Gielbert, J.3    Parker, J.E.4    Romeis, T.5
  • 7
    • 84870625577 scopus 로고    scopus 로고
    • Proteomics-based identification of low-abundance signaling and regulatory protein complexes in native plant tissues
    • Smaczniak, C. et al. Proteomics-based identification of low-abundance signaling and regulatory protein complexes in native plant tissues. Nat. Protoc. 7, 2144-2158 (2012).
    • (2012) Nat. Protoc , vol.7 , pp. 2144-2158
    • Smaczniak, C.1
  • 8
    • 84863643700 scopus 로고    scopus 로고
    • Looking deep inside: Detection of low-abundance proteins in leaf extracts of Arabidopsis and phloem exudates of pumpkin
    • Fröhlich, A. et al. Looking deep inside: detection of low-abundance proteins in leaf extracts of Arabidopsis and phloem exudates of pumpkin. Plant Physiol. 159, 902-914 (2012).
    • (2012) Plant Physiol , vol.159 , pp. 902-914
    • Fröhlich, A.1
  • 9
    • 0032828715 scopus 로고    scopus 로고
    • A generic protein purification method for protein complex characterization and proteome exploration
    • Rigaut, G. et al. A generic protein purification method for protein complex characterization and proteome exploration. Nat. Biotechnol. 17, 1030-1032 (1999).
    • (1999) Nat. Biotechnol , vol.17 , pp. 1030-1032
    • Rigaut, G.1
  • 10
    • 53149142072 scopus 로고    scopus 로고
    • Boosting tandem affinity purification of plant protein complexes
    • Van Leene, J., Witters, E., Inzé, D., De Jaeger, G. Boosting tandem affinity purification of plant protein complexes. Trends Plant Sci. 13, 517-520 (2008).
    • (2008) Trends Plant Sci , vol.13 , pp. 517-520
    • Van Leene, J.1    Witters, E.2    Inzé, D.3    De Jaeger, G.4
  • 11
    • 0034841844 scopus 로고    scopus 로고
    • The tandem affinity purification (TAP) method: A general procedure of protein complex purification
    • Puig, O. et al. The tandem affinity purification (TAP) method: a general procedure of protein complex purification. Methods 24, 218-229 (2001).
    • (2001) Methods , vol.24 , pp. 218-229
    • Puig, O.1
  • 12
    • 70849132924 scopus 로고    scopus 로고
    • Proteome organization in a genome-reduced bacterium
    • Kühner, S. et al. Proteome organization in a genome-reduced bacterium. Science 326, 1235-1240 (2009).
    • (2009) Science , vol.326 , pp. 1235-1240
    • Kühner, S.1
  • 13
    • 33644555054 scopus 로고    scopus 로고
    • Proteome survey reveals modularity of the yeast cell machinery
    • Gavin, A.-C. et al. Proteome survey reveals modularity of the yeast cell machinery. Nature 440, 631-636 (2006).
    • (2006) Nature , vol.440 , pp. 631-636
    • Gavin, A.-C.1
  • 14
    • 33645453254 scopus 로고    scopus 로고
    • Global landscape of protein complexes in the yeast Saccharomyces cerevisiae
    • Krogan, N.J. et al. Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature 440, 637-643 (2006).
    • (2006) Nature , vol.440 , pp. 637-643
    • Krogan, N.J.1
  • 15
    • 77951819088 scopus 로고    scopus 로고
    • Systematic analysis of human protein complexes identifies chromosome segregation proteins
    • Hutchins, J.R.A. et al. Systematic analysis of human protein complexes identifies chromosome segregation proteins. Science 328, 593-599 (2010).
    • (2010) Science , vol.328 , pp. 593-599
    • Hutchins, J.R.A.1
  • 16
    • 13444283630 scopus 로고    scopus 로고
    • Interaction network containing conserved and essential protein complexes in Escherichia coli
    • Butland, G. et al. Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433, 531-537 (2005).
    • (2005) Nature , vol.433 , pp. 531-537
    • Butland, G.1
  • 17
    • 79960707004 scopus 로고    scopus 로고
    • Isolation of transcription factor complexes from Arabidopsis cell suspension cultures by tandem affinity purification
    • Van Leene, J. et al. Isolation of transcription factor complexes from Arabidopsis cell suspension cultures by tandem affinity purification. Methods Mol. Biol. 754, 195-218 (2011).
    • (2011) Methods Mol. Biol , vol.754 , pp. 195-218
    • Van Leene, J.1
  • 18
    • 34547137389 scopus 로고    scopus 로고
    • A tandem affinity purification-based technology platform to study the cell cycle interactome in Arabidopsis thaliana
    • Van Leene, J. et al. A tandem affinity purification-based technology platform to study the cell cycle interactome in Arabidopsis thaliana. Mol. Cell. Proteomics 6, 1226-1238 (2007).
    • (2007) Mol. Cell. Proteomics , vol.6 , pp. 1226-1238
    • Van Leene, J.1
  • 19
    • 46949090817 scopus 로고    scopus 로고
    • The DNA replication checkpoint aids survival of plants deficient in the novel replisome factor ETG1
    • Takahashi, N. et al. The DNA replication checkpoint aids survival of plants deficient in the novel replisome factor ETG1. EMBO J. 27, 1840-1851 (2008).
    • (2008) EMBO J , vol.27 , pp. 1840-1851
    • Takahashi, N.1
  • 20
    • 76749139516 scopus 로고    scopus 로고
    • The MCM-binding protein ETG1 aids sister chromatid cohesion required for postreplicative homologous recombination repair
    • Takahashi, N. et al. The MCM-binding protein ETG1 aids sister chromatid cohesion required for postreplicative homologous recombination repair. PLoS Genet. 6, e1000817 (2010).
    • (2010) PLoS Genet , vol.6 , pp. e1000817
    • Takahashi, N.1
  • 21
    • 77950439369 scopus 로고    scopus 로고
    • NINJA connects the co-repressor TOPLESS to jasmonate signalling
    • Pauwels, L. et al. NINJA connects the co-repressor TOPLESS to jasmonate signalling. Nature 464, 788-791 (2010).
    • (2010) Nature , vol.464 , pp. 788-791
    • Pauwels, L.1
  • 22
    • 84894205984 scopus 로고    scopus 로고
    • The TPLATE adaptor complex drives clathrin-mediated endocytosis in plants
    • Gadeyne, A. et al. The TPLATE adaptor complex drives clathrin-mediated endocytosis in plants. Cell 156, 691-704 (2014).
    • (2014) Cell , vol.156 , pp. 691-704
    • Gadeyne, A.1
  • 23
    • 84878685777 scopus 로고    scopus 로고
    • A protein phosphatase 2A complex spatially controls plant cell division
    • Spinner, L. et al. A protein phosphatase 2A complex spatially controls plant cell division. Nat. Commun. 4, 1863 (2013).
    • (2013) Nat. Commun , vol.4 , pp. 1863
    • Spinner, L.1
  • 24
    • 77955608634 scopus 로고    scopus 로고
    • Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana
    • Van Leene, J. et al. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Mol. Syst. Biol. 6, 397 (2010).
    • (2010) Mol. Syst. Biol , vol.6 , pp. 397
    • Van Leene, J.1
  • 25
    • 84865281034 scopus 로고    scopus 로고
    • SAMBA, a plant-specific anaphase-promoting complex/cyclosome regulator is involved in early development and A-type cyclin stabilization
    • Eloy, N.B. et al. SAMBA, a plant-specific anaphase-promoting complex/cyclosome regulator is involved in early development and A-type cyclin stabilization. Proc. Natl. Acad. Sci. USA 109, 13853-13858 (2012).
    • (2012) Proc. Natl. Acad. Sci. USA , vol.109 , pp. 13853-13858
    • Eloy, N.B.1
  • 26
    • 84856449266 scopus 로고    scopus 로고
    • Arabidopsis ULTRAVIOLET-B-INSENSITIVE4 maintains cell division activity by temporal inhibition of the anaphase-promoting complex/cyclosome
    • Heyman, J. et al. Arabidopsis ULTRAVIOLET-B-INSENSITIVE4 maintains cell division activity by temporal inhibition of the anaphase-promoting complex/cyclosome. Plant Cell 23, 4394-4410 (2011).
    • (2011) Plant Cell , vol.23 , pp. 4394-4410
    • Heyman, J.1
  • 27
    • 84887825960 scopus 로고    scopus 로고
    • ERF115 controls root quiescent center cell division and stem cell replenishment
    • Heyman, J. et al. ERF115 controls root quiescent center cell division and stem cell replenishment. Science 342, 860-863 (2013).
    • (2013) Science , vol.342 , pp. 860-863
    • Heyman, J.1
  • 28
    • 33751211249 scopus 로고    scopus 로고
    • An efficient tandem affinity purification procedure for interaction proteomics in mammalian cells
    • Bürckstümmer, T. et al. An efficient tandem affinity purification procedure for interaction proteomics in mammalian cells. Nat. Methods 3, 1013-1019 (2006).
    • (2006) Nat. Methods , vol.3 , pp. 1013-1019
    • Bürckstümmer, T.1
  • 29
    • 84896899026 scopus 로고    scopus 로고
    • ANGUSTIFOLIA3 binds to SWI/SNF chromatin remodeling complexes to regulate transcription during Arabidopsis leaf development
    • Vercruyssen, L. et al. ANGUSTIFOLIA3 binds to SWI/SNF chromatin remodeling complexes to regulate transcription during Arabidopsis leaf development. Plant Cell 26, 210-229 (2014).
    • (2014) Plant Cell , vol.26 , pp. 210-229
    • Vercruyssen, L.1
  • 30
    • 84862234802 scopus 로고    scopus 로고
    • The Arabidopsis Information Resource (TAIR): Improved gene annotation and new tools
    • Lamesch, P. et al. The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools. Nucleic Acids Res. 40, D1202-D1210 (2012).
    • (2012) Nucleic Acids Res , vol.40 , pp. D1202-D1210
    • Lamesch, P.1
  • 31
    • 77955415819 scopus 로고    scopus 로고
    • The tandem affinity purification method: An efficient system for protein complex purification and protein interaction identification
    • Xu, X. et al. The tandem affinity purification method: an efficient system for protein complex purification and protein interaction identification. Protein Expr. Purif. 72, 149-156 (2010).
    • (2010) Protein Expr. Purif , vol.72 , pp. 149-156
    • Xu, X.1
  • 32
    • 79960197180 scopus 로고    scopus 로고
    • The tandem affinity purification technology: An overview
    • Li, Y. The tandem affinity purification technology: an overview. Biotechnol. Lett. 33, 1487-1499 (2011).
    • (2011) Biotechnol. Lett , vol.33 , pp. 1487-1499
    • Li, Y.1
  • 33
    • 69249192307 scopus 로고    scopus 로고
    • Tandem affinity purification in Drosophila-the advantages of the GS-TAP system
    • Kyriakakis, P., Tipping, M., Abed, L., Veraksa, A. Tandem affinity purification in Drosophila-the advantages of the GS-TAP system. Fly 2, 229-235 (2008).
    • (2008) Fly , vol.2 , pp. 229-235
    • Kyriakakis, P.1    Tipping, M.2    Abed, L.3    Veraksa, A.4
  • 34
    • 84864813624 scopus 로고    scopus 로고
    • A highly efficient multifunctional tandem affinity purification approach applicable to diverse organisms
    • Ma, H. et al. A highly efficient multifunctional tandem affinity purification approach applicable to diverse organisms. Mol. Cell. Proteomics 11, 501-511 (2012).
    • (2012) Mol. Cell. Proteomics , vol.11 , pp. 501-511
    • Ma, H.1
  • 35
    • 68149089810 scopus 로고    scopus 로고
    • Structure of the core editing complex (L-complex) involved in uridine insertion/deletion RNA editing in trypanosomatid mitochondria
    • Li, F. et al. Structure of the core editing complex (L-complex) involved in uridine insertion/deletion RNA editing in trypanosomatid mitochondria. Proc. Natl. Acad. Sci. USA 106, 12306-12310 (2009).
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 12306-12310
    • Li, F.1
  • 36
    • 84884740813 scopus 로고    scopus 로고
    • The heteromultimeric debranching enzyme involved in starch synthesis in Arabidopsis requires both isoamylase1 and isoamylase2 subunits for complex stability and activity
    • Sundberg, M. et al. The heteromultimeric debranching enzyme involved in starch synthesis in Arabidopsis requires both isoamylase1 and isoamylase2 subunits for complex stability and activity. PLoS ONE 8, e75223 (2013).
    • (2013) PLoS ONE , vol.8 , pp. e75223
    • Sundberg, M.1
  • 37
    • 84890282620 scopus 로고    scopus 로고
    • Constitutively active UVR8 photoreceptor variant in Arabidopsis
    • Heijde, M. et al. Constitutively active UVR8 photoreceptor variant in Arabidopsis. Proc. Natl. Acad. Sci. USA 110, 20326-20331 (2013).
    • (2013) Proc. Natl. Acad. Sci. USA , vol.110 , pp. 20326-20331
    • Heijde, M.1
  • 38
    • 54349127144 scopus 로고    scopus 로고
    • Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5
    • Benhamed, M. et al. Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5. Plant J. 56, 493-504 (2008).
    • (2008) Plant J , vol.56 , pp. 493-504
    • Benhamed, M.1
  • 39
    • 84865311917 scopus 로고    scopus 로고
    • Evidence for a role of Arabidopsis CDT1 proteins in gametophyte development and maintenance of genome integrity
    • Domenichini, S. et al. Evidence for a role of Arabidopsis CDT1 proteins in gametophyte development and maintenance of genome integrity. Plant Cell 24, 2779-2791 (2012).
    • (2012) Plant Cell , vol.24 , pp. 2779-2791
    • Domenichini, S.1
  • 40
    • 79551664346 scopus 로고    scopus 로고
    • Adaptin-like protein TPLATE and clathrin recruitment during plant somatic cytokinesis occurs via two distinct pathways
    • Van Damme, D. et al. Adaptin-like protein TPLATE and clathrin recruitment during plant somatic cytokinesis occurs via two distinct pathways. Proc. Natl. Acad. Sci. USA 108, 615-620 (2011).
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 615-620
    • Van Damme, D.1
  • 41
    • 67650227543 scopus 로고    scopus 로고
    • CDKB1;1 forms a functional complex with CYCA2;3 to suppress endocycle onset
    • Boudolf, V. et al. CDKB1;1 forms a functional complex with CYCA2;3 to suppress endocycle onset. Plant Physiol. 150, 1482-1493 (2009).
    • (2009) Plant Physiol , vol.150 , pp. 1482-1493
    • Boudolf, V.1
  • 42
    • 36349019368 scopus 로고    scopus 로고
    • Mitochondrial type-I prohibitins of Arabidopsis thaliana are required for supporting proficient meristem development
    • Van Aken, O. et al. Mitochondrial type-I prohibitins of Arabidopsis thaliana are required for supporting proficient meristem development. Plant J. 52, 850-864 (2007).
    • (2007) Plant J , vol.52 , pp. 850-864
    • Van Aken, O.1
  • 43
    • 84887146454 scopus 로고    scopus 로고
    • Centromeric cohesion is protected twice at meiosis, by SHUGOSHINs at anaphase i and by PATRONUS at interkinesis
    • Cromer, L. et al. Centromeric cohesion is protected twice at meiosis, by SHUGOSHINs at anaphase I and by PATRONUS at interkinesis. Curr. Biol. 23, 2090-2099 (2013).
    • (2013) Curr. Biol , vol.23 , pp. 2090-2099
    • Cromer, L.1
  • 44
    • 82755161225 scopus 로고    scopus 로고
    • Auxin-dependent cell cycle reactivation through transcriptional regulation of Arabidopsis E2Fa by lateral organ boundary proteins
    • Berckmans, B. et al. Auxin-dependent cell cycle reactivation through transcriptional regulation of Arabidopsis E2Fa by lateral organ boundary proteins. Plant Cell 23, 3671-3683 (2011).
    • (2011) Plant Cell , vol.23 , pp. 3671-3683
    • Berckmans, B.1
  • 45
    • 76549105500 scopus 로고    scopus 로고
    • Plant Elongator regulates auxin-related genes during RNA polymerase II transcription elongation
    • Nelissen, H. et al. Plant Elongator regulates auxin-related genes during RNA polymerase II transcription elongation. Proc. Natl. Acad. Sci. USA 107, 1678-1683 (2010).
    • (2010) Proc. Natl. Acad. Sci. USA , vol.107 , pp. 1678-1683
    • Nelissen, H.1
  • 46
    • 79953122769 scopus 로고    scopus 로고
    • The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses
    • Fernández-Calvo, P. et al. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. Plant Cell 23, 701-715 (2011).
    • (2011) Plant Cell , vol.23 , pp. 701-715
    • Fernández-Calvo, P.1
  • 48
    • 84873250550 scopus 로고    scopus 로고
    • PYRABACTIN RESISTANCE1-LIKE8 plays an important role for the regulation of abscisic acid signaling in root
    • Antoni, R. et al. PYRABACTIN RESISTANCE1-LIKE8 plays an important role for the regulation of abscisic acid signaling in root. Plant Physiol. 161, 931-941 (2013).
    • (2013) Plant Physiol , vol.161 , pp. 931-941
    • Antoni, R.1
  • 49
    • 84884683279 scopus 로고    scopus 로고
    • The clathrin adaptor complex AP-2 mediates endocytosis of brassinosteroid insensitive1 in Arabidopsis
    • Di Rubbo, S. et al. The clathrin adaptor complex AP-2 mediates endocytosis of BRASSINOSTEROID INSENSITIVE1 in Arabidopsis. Plant Cell 25, 2986-2997 (2013).
    • (2013) Plant Cell , vol.25 , pp. 2986-2997
    • Di Rubbo, S.1
  • 50
    • 84880957255 scopus 로고    scopus 로고
    • MTV1 and MTV4 encode plant-specific ENTH and ARF GAP proteins that mediate clathrin-dependent trafficking of vacuolar cargo from the trans-Golgi network
    • Sauer, M. et al. MTV1 and MTV4 encode plant-specific ENTH and ARF GAP proteins that mediate clathrin-dependent trafficking of vacuolar cargo from the trans-Golgi network. Plant Cell 25, 2217-2235 (2013).
    • (2013) Plant Cell , vol.25 , pp. 2217-2235
    • Sauer, M.1
  • 51
    • 84891928494 scopus 로고    scopus 로고
    • Retromer subunits VPS35A and VPS29 mediate prevacuolar compartment (PVC) function in Arabidopsis
    • Nodzyński, T. et al. Retromer subunits VPS35A and VPS29 mediate prevacuolar compartment (PVC) function in Arabidopsis. Mol. Plant 6, 1849-1862 (2013).
    • (2013) Mol. Plant , vol.6 , pp. 1849-1862
    • Nodzyński, T.1
  • 52
    • 84871883667 scopus 로고    scopus 로고
    • Protein-protein and protein-membrane associations in the lignin pathway
    • Bassard, J.-E. et al. Protein-protein and protein-membrane associations in the lignin pathway. Plant Cell 24, 4465-4482 (2012).
    • (2012) Plant Cell , vol.24 , pp. 4465-4482
    • Bassard, J.-E.1
  • 53
    • 0035999895 scopus 로고    scopus 로고
    • Synchronous Arabidopsissuspension cultures for analysis of cell-cycle gene activity
    • Menges, M., Murray, J.A.H. Synchronous Arabidopsissuspension cultures for analysis of cell-cycle gene activity. Plant J. 30, 203-212 (2002).
    • (2002) Plant J , vol.30 , pp. 203-212
    • Menges, M.1    Murray, J.A.H.2
  • 54
    • 84897624321 scopus 로고    scopus 로고
    • A generic tool for transcription factor target gene discovery in Arabidopsis cell suspension cultures based on tandem chromatin affinity purification
    • Verkest, A. et al. A generic tool for transcription factor target gene discovery in Arabidopsis cell suspension cultures based on tandem chromatin affinity purification. Plant Physiol. 164, 1122-1133 (2014).
    • (2014) Plant Physiol , vol.164 , pp. 1122-1133
    • Verkest, A.1
  • 55
    • 84881437733 scopus 로고    scopus 로고
    • The transience of transient overexpression
    • Gibson, T.J., Seiler, M., Veitia, R.A. The transience of transient overexpression. Nat. Methods 10, 715-721 (2013).
    • (2013) Nat. Methods , vol.10 , pp. 715-721
    • Gibson, T.J.1    Seiler, M.2    Veitia, R.A.3
  • 56
    • 84884688563 scopus 로고    scopus 로고
    • Parallel proteomic and phosphoproteomic analyses of successive stages of maize leaf development
    • Facette, M.R., Shen, Z., Björnsdóttir, F.R., Briggs, S.P., Smith, L.G. Parallel proteomic and phosphoproteomic analyses of successive stages of maize leaf development. Plant Cell 25, 2798-2812 (2013).
    • (2013) Plant Cell , vol.25 , pp. 2798-2812
    • Facette, M.R.1    Shen, Z.2    Björnsdóttir, F.R.3    Briggs, S.P.4    Smith, L.G.5
  • 57
    • 58149465395 scopus 로고    scopus 로고
    • Decoy methods for assessing false positives and false discovery rates in shotgun proteomics
    • Wang, G., Wu, W.W., Zhang, Z., Masilamani, S., Shen, R.-F. Decoy methods for assessing false positives and false discovery rates in shotgun proteomics. Anal. Chem. 81, 146-159 (2009).
    • (2009) Anal. Chem. , vol.81 , pp. 146-159
    • Wang, G.1    Wu, W.W.2    Zhang, Z.3    Masilamani, S.4    Shen, R.-F.5
  • 58
    • 84856569514 scopus 로고    scopus 로고
    • Dissecting plant genomes with the PLAZA comparative genomics platform
    • Van Bel, M. et al. Dissecting plant genomes with the PLAZA comparative genomics platform. Plant Physiol. 158, 590-600 (2012).
    • (2012) Plant Physiol , vol.158 , pp. 590-600
    • Van Bel, M.1
  • 59
    • 58349111875 scopus 로고    scopus 로고
    • AmiGO: Online access to ontology and annotation data
    • Carbon, S. et al. AmiGO: online access to ontology and annotation data. Bioinformatics 25, 288-289 (2009).
    • (2009) Bioinformatics , vol.25 , pp. 288-289
    • Carbon, S.1
  • 60
    • 84857834641 scopus 로고    scopus 로고
    • Assignment of protein interactions from affinity purification/mass spectrometry data
    • Pardo, M., Choudhary, J.S. Assignment of protein interactions from affinity purification/mass spectrometry data. J. Proteome Res. 11, 1462-1474 (2012).
    • (2012) J. Proteome Res , vol.11 , pp. 1462-1474
    • Pardo, M.1    Choudhary, J.S.2
  • 61
    • 0242490780 scopus 로고    scopus 로고
    • Cytoscape: A software environment for integrated models of biomolecular interaction networks
    • Shannon, P. et al. Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res. 13, 2498-2504 (2003).
    • (2003) Genome Res , vol.13 , pp. 2498-2504
    • Shannon, P.1
  • 62
    • 33845435000 scopus 로고    scopus 로고
    • Agrobacterium-mediated transformation of Arabidopsis thalianausing the floral dip method
    • Zhang, X., Henriques, R., Lin, S.-S., Niu, Q.-W., Chua, N.-H. Agrobacterium-mediated transformation of Arabidopsis thalianausing the floral dip method. Nat. Protoc. 1, 641-646 (2006).
    • (2006) Nat. Protoc , vol.1 , pp. 641-646
    • Zhang, X.1    Henriques, R.2    Lin, S.-S.3    Niu, Q.-W.4    Chua, N.-H.5
  • 63
    • 0032447801 scopus 로고    scopus 로고
    • Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
    • Clough, S.J., Bent, A.F. Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J. 16, 735-743 (1998).
    • (1998) Plant J , vol.16 , pp. 735-743
    • Clough, S.J.1    Bent, A.F.2
  • 64
    • 77952344256 scopus 로고    scopus 로고
    • Quantitative proteomics combined with BAC TransgeneOmics reveals in vivo protein interactions
    • Hubner, N.C. et al. Quantitative proteomics combined with BAC TransgeneOmics reveals in vivo protein interactions. J. Cell Biol. 189, 739-754 (2010).
    • (2010) J. Cell Biol , vol.189 , pp. 739-754
    • Hubner, N.C.1
  • 65
    • 22044453506 scopus 로고    scopus 로고
    • The transcription factor AtGRF5 and the transcription coactivator AN3 regulate cell proliferation in leaf primordia of Arabidopsis thaliana
    • Horiguchi, G., Kim, G.-T., Tsukaya, H. The transcription factor AtGRF5 and the transcription coactivator AN3 regulate cell proliferation in leaf primordia of Arabidopsis thaliana. Plant J. 43, 68-78 (2005).
    • (2005) Plant J , vol.43 , pp. 68-78
    • Horiguchi, G.1    Kim, G.-T.2    Tsukaya, H.3
  • 66
    • 84863780541 scopus 로고    scopus 로고
    • CORNET 2.0: Integrating plant coexpression, protein-protein interactions, regulatory interactions, gene associations and functional annotations
    • De Bodt, S., Hollunder, J., Nelissen, H., Meulemeester, N., Inzé, D. CORNET 2.0: integrating plant coexpression, protein-protein interactions, regulatory interactions, gene associations and functional annotations. New Phytol. 195, 707-720 (2012).
    • (2012) New Phytol , vol.195 , pp. 707-720
    • De Bodt, S.1    Hollunder, J.2    Nelissen, H.3    Meulemeester, N.4    Inzé, D.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.