Evidence for a role of Arabidopsis CDT1 proteins in gametophyte development and maintenance of genome integrity

Plant Cell

Volumn 24, Issue 7, 2012, Pages 2779-2791

  Domenichini, Séverine ^a   Benhamed, Moussa ^a   de Jaeger, Geert ^b,c   van de Slijke, Eveline ^b,c   Blanchet, Sophie ^a   Bourge, Mickaël ^d   de Veylder, Lieven ^b,c   Bergounioux, Catherine ^a   Raynaud, Cécile ^a  

^a INSTITUTE OF PLANT SCIENCES PARIS SACLAY IPS2   (France)

^b Vlaams Instituut Voor Biotechnologie   (Belgium)

^c GHENT UNIVERSITY   (Belgium)

^d CNRS   (France)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84865311917     PISSN: 10404651     EISSN: 1532298X     Source Type: Journal    
DOI: 10.1105/tpc.112.100156     Document Type: Article

References (52)

1. Adachi, S., et al. (2011). Programmed induction of endoreduplication by DNA double-strand breaks in Arabidopsis. Proc. Natl. Acad. Sci. USA 108: 10004-10009.
2. Alexander, M.P. (1969). Differential staining of aborted and nonaborted pollen. Stain Technol. 44: 117-122.
3. Baranczewski, P., Nehls, P., Rieger, R., Rajewsky, M.F., and Schubert, I. (1997). Removal of O6-methylguanine from plant DNA in vivo is accelerated under conditions of clastogenic adaptation. Environ. Mol. Mutagen. 29: 400-405.
4. Bensimon, A., Aebersold, R., and Shiloh, Y. (2011). Beyond ATM: The protein kinase landscape of the DNA damage response. FEBS Lett. 585: 1625-1639.
5. Berger, F., and Twell, D. (2011). Germline specification and function in plants. Annu. Rev. Plant Biol. 62: 461-484.
6. Bürckstümmer, T., Bennett, K.L., Preradovic, A., Schütze, G., Hantschel, O., Superti-Furga, G., and Bauch, A. (2006). An efficient tandem affinity purification procedure for interaction proteomics in mammalian cells. Nat. Methods 3: 1013-1019.
7. Caro, E., Castellano, M.M., and Gutierrez, C. (2007). A chromatin link that couples cell division to root epidermis patterning in Arabidopsis. Nature 447: 213-217.
8. Castellano, M.d.M., Boniotti, M.B., Caro, E., Schnittger, A., and Gutierrez, C. (2004). DNA replication licensing affects cell proliferation or endoreplication in a cell type-specific manner. Plant Cell 16: 2380-2393.
9. Castellano, M.M., del Pozo, J.C., Ramirez-Parra, E., Brown, S., and Gutierrez, C. (2001). Expression and stability of Arabidopsis CDC6 are associated with endoreplication. Plant Cell 13: 2671-2686.
10. Claycomb, J.M., MacAlpine, D.M., Evans, J.G., Bell, S.P., and Orr-Weaver, T.L. (2002). Visualization of replication initiation and elongation in Drosophila. J. Cell Biol. 159: 225-236.
11. Clough, S.J., and Bent, A.F. (1998). Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J. 16: 735-743.
12. Cools, T., and De Veylder, L. (2009). DNA stress checkpoint control and plant development. Curr. Opin. Plant Biol. 12: 23-28.
13. Cools, T., Iantcheva, A., Weimer, A.K., Boens, S., Takahashi, N., Maes, S., Van den Daele, H., Van Isterdael, G., Schnittger, A., and De Veylder, L. (2011). The Arabidopsis thaliana checkpoint kinase WEE1 protects against premature vascular differentiation during replication stress. Plant Cell 23: 1435-1448.
14. Costas, C., Sanchez, M.d.L., Sequeira-Mendes, J., and Gutierrez, C. (2011). Progress in understanding DNA replication control. Plant Sci. 181: 203-209.
15. Culligan, K.M., Robertson, C.E., Foreman, J., Doerner, P., and Britt, A.B. (2006). ATR and ATM play both distinct and additive roles in response to ionizing radiation. Plant J. 48: 947-961.
16. De Marco, V., et al. (2009). Quaternary structure of the human Cdt1-geminin complex regulates DNA replication licensing. Proc. Natl. Acad. Sci. USA 106: 19807-19812.
17. DePamphilis, M.L. (2003). The 'ORC cycle': A novel pathway for regulating eukaryotic DNA replication. Gene 310: 1-15.
18. De Schutter, K., Joubès, J., Cools, T., Verkest, A., Corellou, F., Babiychuk, E., Van Der Schueren, E., Beeckman, T., Kushnir, S., Inzé, D., and De Veylder, L. (2007). Arabidopsis WEE1 kinase controls cell cycle arrest in response to activation of the DNA integrity checkpoint. Plant Cell 19: 211-225.
19. De Veylder, L., Beeckman, T., and Inzé, D. (2007). The ins and outs of the plant cell cycle. Nat. Rev. Mol. Cell Biol. 8: 655-665.
20. De Veylder, L., Larkin, J.C., and Schnittger, A. (2011). Molecular control and function of endoreplication in development and physiology. Trends Plant Sci. 16: 624-634.
21. Domenichini, S., Raynaud, C., Ni, D.A., Henry, Y., and Bergounioux, C. (2006). Atmnd1-delta1 is sensitive to gamma-irradiation and defective in meiotic DNA repair. DNA Repair (Amst.) 5: 455-464.
22. Ebel, C., Mariconti, L., and Gruissem, W. (2004). Plant retinoblastoma homologues control nuclear proliferation in the female gametophyte. Nature 429: 776-780.
23. Fulcher, N., and Sablowski, R. (2009). Hypersensitivity to DNA damage in plant stem cell niches. Proc. Natl. Acad. Sci. USA 106: 20984-20988.
24. Galbraith, D.W., Harkins, K.R., Maddox, J.M., Ayres, N.M., Sharma, D.P., and Firoozabady, E. (1983). Rapid flow cytometric analysis of the cell cycle in intact plant tissues. Science 220: 512-527.
25. Hajdukiewicz, P., Svab, Z., and Maliga, P. (1994). The small, versatile pPZP family of Agrobacterium binary vectors for plant transformation. Plant Mol. Biol. 25: 989-994.
26. Inzé, D., and De Veylder, L. (2006). Cell cycle regulation in plant development. Annu. Rev. Genet. 40: 77-105.
27. Kisielewska, J., and Blow, J.J. (2012). Dynamic interactions of high Cdt1 and geminin levels regulate S phase in early Xenopus embryos. Development 139: 63-74.
28. Lu, Y., Li, C., Wang, H., Chen, H., Berg, H., and Xia, Y. (2011). AtPPR2, an Arabidopsis pentatricopeptide repeat protein, binds to plastid 23S rRNA and plays an important role in the first mitotic division during gametogenesis and in cell proliferation during embryogenesis. Plant J. 67: 13-25.
29. Lutzmann, M., Maiorano, D., and Méchali, M. (2006). A Cdt1-geminin complex licenses chromatin for DNA replication and prevents rereplication during S phase in Xenopus. EMBO J. 25: 5764-5774.
30. Lydeard, J.R., Lipkin-Moore, Z., Sheu, Y.J., Stillman, B., Burgers, P.M., and Haber, J.E. (2010). Break-induced replication requires all essential DNA replication factors except those specific for pre-RC assembly. Genes Dev. 24: 1133-1144.
31. Masuda, H.P., Ramos, G.B., de Almeida-Engler, J., Cabral, L.M., Coqueiro, V.M., Macrini, C.M., Ferreira, P.C., and Hemerly, A.S. (2004). Genome based identification and analysis of the pre-replicative complex of Arabidopsis thaliana. FEBS Lett. 574: 192-202.
32. Nam, E.A., and Cortez, D. (2011). ATR signalling: More than meeting at the fork. Biochem. J. 436: 527-536.
33. Ni, D.A., Sozzani, R., Blanchet, S., Domenichini, S., Reuzeau, C., Cella, R., Bergounioux, C., and Raynaud, C. (2009). The Arabidopsis MCM2 gene is essential to embryo development and its over-expression alters root meristem function. New Phytol. 184: 311-322.
34. Nowack, M.K., Grini, P.E., Jakoby, M.J., Lafos, M., Koncz, C., and Schnittger, A. (2006). A positive signal from the fertilization of the egg cell sets off endosperm proliferation in angiosperm embryogenesis. Nat. Genet. 38: 63-67.
35. Petropoulou, C., Kotantaki, P., Karamitros, D., and Taraviras, S. (2008). Cdt1 and geminin in cancer: Markers or triggers of malignant transformation? Front. Biosci. 13: 4485-4494.
36. Pursell, Z.F., Isoz, I., Lundström, E.B., Johansson, E., and Kunkel, T.A. (2007). Yeast DNA polymerase epsilon participates in leadingstrand DNA replication. Science 317: 127-130.
37. Pursell, Z.F., and Kunkel, T.A. (2008). DNA polymerase epsilon: A polymerase of unusual size (and complexity). Prog. Nucleic Acid Res. Mol. Biol. 82: 101-145.
38. Raynaud, C., Perennes, C., Reuzeau, C., Catrice, O., Brown, S., and Bergounioux, C. (2005). Cell and plastid division are coordinated through the prereplication factor AtCDT1. Proc. Natl. Acad. Sci. USA 102: 8216-8221.
39. Ronceret, A., Guilleminot, J., Lincker, F., Gadea-Vacas, J., Delorme, V., Bechtold, N., Pelletier, G., Delseny, M., Chabouté, M.E., and Devic, M. (2005). Genetic analysis of two Arabidopsis DNA polymerase epsilon subunits during early embryogenesis. Plant J. 44: 223-236.
40. Roukos, V., Kinkhabwala, A., Colombelli, J., Kotsantis, P., Taraviras, S., Nishitani, H., Stelzer, E., Bastiaens, P., and Lygerou, Z. (2011). Dynamic recruitment of licensing factor Cdt1 to sites of DNA damage. J. Cell Sci. 124: 422-434.
41. Scholl, R.L., May, S.T., and Ware, D.H. (2000). Seed and molecular resources for Arabidopsis. Plant Physiol. 124: 1477-1480.
42. Springer, P.S., Holding, D.R., Groover, A., Yordan, C., and Martienssen, R.A. (2000). The essential Mcm7 protein PROLIFERA is localized to the nucleus of dividing cells during the G(1) phase and is required maternally for early Arabidopsis development. Development 127: 1815-1822.
43. Springer, P.S., McCombie, W.R., Sundaresan, V., and Martienssen, R.A. (1995). Gene trap tagging of PROLIFERA, an essential MCM2-3-5-like gene in Arabidopsis. Science 268: 877-880.
44. Truong, L.N., and Wu, X. (2011). Prevention of DNA re-replication in eukaryotic cells. J Mol Cell Biol 3: 13-22.
45. Tsuyama, T., Watanabe, S., Aoki, A., Cho, Y., Seki, M., Enomoto, T., and Tada, S. (2009). Repression of nascent strand elongation by deregulated Cdt1 during DNA replication in Xenopus egg extracts. Mol. Biol. Cell 20: 937-947.
46. Van Leene, J., et al. (2010). Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Mol. Syst. Biol. 6: 397.
47. Van Leene, J., et al. (2007). A tandem affinity purification-based technology platform to study the cell cycle interactome in Arabidopsis thaliana. Mol. Cell. Proteomics 6: 1226-1238.
48. Van Leene, J., Witters, E., Inzé, D., and De Jaeger, G. (2008). Boosting tandem affinity purification of plant protein complexes. Trends Plant Sci. 13: 517-520.
49. Xouri, G., Dimaki, M., Bastiaens, P.I., and Lygerou, Z. (2007). Cdt1 interactions in the licensing process: A model for dynamic spatiotemporal control of licensing. Cell Cycle 6: 1549-1552.
50. Yang, W.C., Shi, D.Q., and Chen, Y.H. (2010). Female gametophyte development in flowering plants. Annu. Rev. Plant Biol. 61: 89-108.
51. Yoshiyama, K., Conklin, P.A., Huefner, N.D., and Britt, A.B. (2009). Suppressor of gamma response 1 (SOG1) encodes a putative transcription factor governing multiple responses to DNA damage. Proc. Natl. Acad. Sci. USA 106: 12843-12848.
52. Zhang, J., Teng, C., and Liang, Y. (2011). Programmed cell death may act as a surveillance mechanism to safeguard male gametophyte development in Arabidopsis. Protein Cell 2: 837-844.