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Volumn 10, Issue 2, 2015, Pages 193-203

Respective functions of two distinct siwi complexes assembled during PIWI-interacting RNA biogenesis in bombyx germ cells

Author keywords

[No Author keywords available]

Indexed keywords

AGO3 PROTEIN; DEAD BOX PROTEIN; DIMER; INSECT PROTEIN; PIWI INTERACTING RNA; PIWI PROTEIN; QIN PROTEIN; SIWI PROTEIN; SPN E PROTEIN; UNCLASSIFIED DRUG; VASA PROTEIN; PROTEIN BINDING; SMALL INTERFERING RNA;

EID: 84920933929     PISSN: None     EISSN: 22111247     Source Type: Journal    
DOI: 10.1016/j.celrep.2014.12.013     Document Type: Article
Times cited : (87)

References (46)
  • 1
    • 84857059151 scopus 로고    scopus 로고
    • The tudor domain protein kumo is required to assemble the nuage and to generate germline piRNAs in Drosophila
    • Anand A., Kai T. The tudor domain protein kumo is required to assemble the nuage and to generate germline piRNAs in Drosophila. EMBO J. 2012, 31:870-882.
    • (2012) EMBO J. , vol.31 , pp. 870-882
    • Anand, A.1    Kai, T.2
  • 3
    • 34248160438 scopus 로고    scopus 로고
    • Developmentally regulated piRNA clusters implicate MILI in transposon control
    • Aravin A.A., Sachidanandam R., Girard A., Fejes-Toth K., Hannon G.J. Developmentally regulated piRNA clusters implicate MILI in transposon control. Science 2007, 316:744-747.
    • (2007) Science , vol.316 , pp. 744-747
    • Aravin, A.A.1    Sachidanandam, R.2    Girard, A.3    Fejes-Toth, K.4    Hannon, G.J.5
  • 5
    • 33947273235 scopus 로고    scopus 로고
    • Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila
    • Brennecke J., Aravin A.A., Stark A., Dus M., Kellis M., Sachidanandam R., Hannon G.J. Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. Cell 2007, 128:1089-1103.
    • (2007) Cell , vol.128 , pp. 1089-1103
    • Brennecke, J.1    Aravin, A.A.2    Stark, A.3    Dus, M.4    Kellis, M.5    Sachidanandam, R.6    Hannon, G.J.7
  • 8
    • 0016589552 scopus 로고
    • Germ plasm and the differentiation of the germ cell line
    • Eddy E.M. Germ plasm and the differentiation of the germ cell line. Int. Rev. Cytol. 1975, 43:229-280.
    • (1975) Int. Rev. Cytol. , vol.43 , pp. 229-280
    • Eddy, E.M.1
  • 9
    • 0028828689 scopus 로고
    • Homeless is required for RNA localization in Drosophila oogenesis and encodes a new member of the DE-H family of RNA-dependent ATPases
    • Gillespie D.E., Berg C.A. Homeless is required for RNA localization in Drosophila oogenesis and encodes a new member of the DE-H family of RNA-dependent ATPases. Genes Dev. 1995, 9:2495-2508.
    • (1995) Genes Dev. , vol.9 , pp. 2495-2508
    • Gillespie, D.E.1    Berg, C.A.2
  • 10
    • 0032834055 scopus 로고    scopus 로고
    • EIF4 initiation factors: effectors of mRNA recruitment to ribosomes and regulators of translation
    • Gingras A.C., Raught B., Sonenberg N. eIF4 initiation factors: effectors of mRNA recruitment to ribosomes and regulators of translation. Annu. Rev. Biochem. 1999, 68:913-963.
    • (1999) Annu. Rev. Biochem. , vol.68 , pp. 913-963
    • Gingras, A.C.1    Raught, B.2    Sonenberg, N.3
  • 12
    • 84904499496 scopus 로고    scopus 로고
    • Small RNA profiling and characterization of piRNA clusters in the adult testes of the common marmoset, a model primate
    • Hirano T., Iwasaki Y.W., Lin Z.Y., Imamura M., Seki N.M., Sasaki E., Saito K., Okano H., Siomi M.C., Siomi H. Small RNA profiling and characterization of piRNA clusters in the adult testes of the common marmoset, a model primate. RNA 2014, 20:1223-1237.
    • (2014) RNA , vol.20 , pp. 1223-1237
    • Hirano, T.1    Iwasaki, Y.W.2    Lin, Z.Y.3    Imamura, M.4    Seki, N.M.5    Sasaki, E.6    Saito, K.7    Okano, H.8    Siomi, M.C.9    Siomi, H.10
  • 13
    • 84868589615 scopus 로고    scopus 로고
    • Biology of PIWI-interacting RNAs: new insights into biogenesis and function inside and outside of germlines
    • Ishizu H., Siomi H., Siomi M.C. Biology of PIWI-interacting RNAs: new insights into biogenesis and function inside and outside of germlines. Genes Dev. 2012, 26:2361-2373.
    • (2012) Genes Dev. , vol.26 , pp. 2361-2373
    • Ishizu, H.1    Siomi, H.2    Siomi, M.C.3
  • 14
    • 67649344774 scopus 로고    scopus 로고
    • The Bombyx ovary-derived cell line endogenously expresses PIWI/PIWI-interacting RNA complexes
    • Kawaoka S., Hayashi N., Suzuki Y., Abe H., Sugano S., Tomari Y., Shimada T., Katsuma S. The Bombyx ovary-derived cell line endogenously expresses PIWI/PIWI-interacting RNA complexes. RNA 2009, 15:1258-1264.
    • (2009) RNA , vol.15 , pp. 1258-1264
    • Kawaoka, S.1    Hayashi, N.2    Suzuki, Y.3    Abe, H.4    Sugano, S.5    Tomari, Y.6    Shimada, T.7    Katsuma, S.8
  • 15
    • 80052991624 scopus 로고    scopus 로고
    • 3' end formation of PIWI-interacting RNAs invitro
    • Kawaoka S., Izumi N., Katsuma S., Tomari Y. 3' end formation of PIWI-interacting RNAs invitro. Mol. Cell 2011, 43:1015-1022.
    • (2011) Mol. Cell , vol.43 , pp. 1015-1022
    • Kawaoka, S.1    Izumi, N.2    Katsuma, S.3    Tomari, Y.4
  • 19
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie 2
    • Langmead B., Salzberg S.L. Fast gapped-read alignment with Bowtie 2. Nat. Methods 2012, 9:357-359.
    • (2012) Nat. Methods , vol.9 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 20
    • 0023772979 scopus 로고
    • The product of the Drosophila gene vasa is very similar to eukaryotic initiation factor-4A
    • Lasko P.F., Ashburner M. The product of the Drosophila gene vasa is very similar to eukaryotic initiation factor-4A. Nature 1988, 335:611-617.
    • (1988) Nature , vol.335 , pp. 611-617
    • Lasko, P.F.1    Ashburner, M.2
  • 21
    • 0025310979 scopus 로고
    • Posterior localization of vasa protein correlates with, but is not sufficient for, pole cell development
    • Lasko P.F., Ashburner M. Posterior localization of vasa protein correlates with, but is not sufficient for, pole cell development. Genes Dev. 1990, 4:905-921.
    • (1990) Genes Dev. , vol.4 , pp. 905-921
    • Lasko, P.F.1    Ashburner, M.2
  • 22
    • 34249849029 scopus 로고    scopus 로고
    • Unique germ-line organelle, nuage, functions to repress selfish genetic elements in Drosophila melanogaster
    • Lim A.K., Kai T. Unique germ-line organelle, nuage, functions to repress selfish genetic elements in Drosophila melanogaster. Proc. Natl. Acad. Sci. USA 2007, 104:6714-6719.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 6714-6719
    • Lim, A.K.1    Kai, T.2
  • 24
    • 0015027786 scopus 로고
    • Polar granules of Drosophila. 3. The continuity of polar granules during the life cycle of Drosophila
    • Mahowald A.P. Polar granules of Drosophila. 3. The continuity of polar granules during the life cycle of Drosophila. J.Exp. Zool. 1971, 176:329-343.
    • (1971) J.Exp. Zool. , vol.176 , pp. 329-343
    • Mahowald, A.P.1
  • 27
    • 28444437427 scopus 로고    scopus 로고
    • Slicer function of Drosophila Argonautes and its involvement in RISC formation
    • Miyoshi K., Tsukumo H., Nagami T., Siomi H., Siomi M.C. Slicer function of Drosophila Argonautes and its involvement in RISC formation. Genes Dev. 2005, 19:2837-2848.
    • (2005) Genes Dev. , vol.19 , pp. 2837-2848
    • Miyoshi, K.1    Tsukumo, H.2    Nagami, T.3    Siomi, H.4    Siomi, M.C.5
  • 28
    • 78649662103 scopus 로고    scopus 로고
    • Biogenesis pathways of piRNAs loaded onto AGO3 in the Drosophila testis
    • Nagao A., Mituyama T., Huang H., Chen D., Siomi M.C., Siomi H. Biogenesis pathways of piRNAs loaded onto AGO3 in the Drosophila testis. RNA 2010, 16:2503-2515.
    • (2010) RNA , vol.16 , pp. 2503-2515
    • Nagao, A.1    Mituyama, T.2    Huang, H.3    Chen, D.4    Siomi, M.C.5    Siomi, H.6
  • 30
    • 84874239350 scopus 로고    scopus 로고
    • Roles of R2D2, a cytoplasmic D2 body component, in the endogenous siRNA pathway in Drosophila
    • Nishida K.M., Miyoshi K., Ogino A., Miyoshi T., Siomi H., Siomi M.C. Roles of R2D2, a cytoplasmic D2 body component, in the endogenous siRNA pathway in Drosophila. Mol. Cell 2013, 49:680-691.
    • (2013) Mol. Cell , vol.49 , pp. 680-691
    • Nishida, K.M.1    Miyoshi, K.2    Ogino, A.3    Miyoshi, T.4    Siomi, H.5    Siomi, M.C.6
  • 31
    • 84910656239 scopus 로고    scopus 로고
    • The DExH box helicase domain of Spindle-E is necessary for retrotransposon silencing and axial patterning during Drosophila oogenesis
    • Ott K.M., Nguyen T., Navarro C. The DExH box helicase domain of Spindle-E is necessary for retrotransposon silencing and axial patterning during Drosophila oogenesis. G3 2014, 4:2247-2257.
    • (2014) G3 , vol.4 , pp. 2247-2257
    • Ott, K.M.1    Nguyen, T.2    Navarro, C.3
  • 32
    • 0026680746 scopus 로고
    • Mutational analysis of a DEAD box RNA helicase: the mammalian translation initiation factor eIF-4A
    • Pause A., Sonenberg N. Mutational analysis of a DEAD box RNA helicase: the mammalian translation initiation factor eIF-4A. EMBO J. 1992, 11:2643-2654.
    • (1992) EMBO J. , vol.11 , pp. 2643-2654
    • Pause, A.1    Sonenberg, N.2
  • 33
    • 84855927549 scopus 로고    scopus 로고
    • PiRNAs and their involvement in male germline development in mice
    • Pillai R.S., Chuma S. piRNAs and their involvement in male germline development in mice. Dev. Growth Differ. 2012, 54:78-92.
    • (2012) Dev. Growth Differ. , vol.54 , pp. 78-92
    • Pillai, R.S.1    Chuma, S.2
  • 34
    • 33747369856 scopus 로고    scopus 로고
    • Specific association of Piwi with rasiRNAs derived from retrotransposon and heterochromatic regions in the Drosophila genome
    • Saito K., Nishida K.M., Mori T., Kawamura Y., Miyoshi K., Nagami T., Siomi H., Siomi M.C. Specific association of Piwi with rasiRNAs derived from retrotransposon and heterochromatic regions in the Drosophila genome. Genes Dev. 2006, 20:2214-2222.
    • (2006) Genes Dev. , vol.20 , pp. 2214-2222
    • Saito, K.1    Nishida, K.M.2    Mori, T.3    Kawamura, Y.4    Miyoshi, K.5    Nagami, T.6    Siomi, H.7    Siomi, M.C.8
  • 37
    • 0022508110 scopus 로고
    • Germline autonomy of maternal-effect mutations altering the embryonic body pattern of Drosophila
    • Schupbach T., Wieschaus E. Germline autonomy of maternal-effect mutations altering the embryonic body pattern of Drosophila. Dev. Biol. 1986, 113:443-448.
    • (1986) Dev. Biol. , vol.113 , pp. 443-448
    • Schupbach, T.1    Wieschaus, E.2
  • 39
    • 33646017369 scopus 로고    scopus 로고
    • Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa
    • Sengoku T., Nureki O., Nakamura A., Kobayashi S., Yokoyama S. Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa. Cell 2006, 125:287-300.
    • (2006) Cell , vol.125 , pp. 287-300
    • Sengoku, T.1    Nureki, O.2    Nakamura, A.3    Kobayashi, S.4    Yokoyama, S.5
  • 40
    • 78149481868 scopus 로고    scopus 로고
    • The piRNA pathway: a fly's perspective on the guardian of the genome
    • Senti K.A., Brennecke J. The piRNA pathway: a fly's perspective on the guardian of the genome. Trends Genet. 2010, 26:499-509.
    • (2010) Trends Genet. , vol.26 , pp. 499-509
    • Senti, K.A.1    Brennecke, J.2
  • 43
    • 33746502166 scopus 로고    scopus 로고
    • A distinct small RNA pathway silences selfish genetic elements in the germline
    • Vagin V.V., Sigova A., Li C., Seitz H., Gvozdev V., Zamore P.D. A distinct small RNA pathway silences selfish genetic elements in the germline. Science 2006, 313:320-324.
    • (2006) Science , vol.313 , pp. 320-324
    • Vagin, V.V.1    Sigova, A.2    Li, C.3    Seitz, H.4    Gvozdev, V.5    Zamore, P.D.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.