Induction of histone H3K4 methylation at the promoter, enhancer, and transcribed regions of the Si and Sglt1 genes in rat jejunum in response to a high-starch/low-fat diet

Nutrition

Volumn 31, Issue 2, 2015, Pages 366-372

  Inoue, Seiya ^a   Honma, Kazue ^a   Mochizuki, Kazuki ^a,b   Goda, Toshinao ^a  

^a UNIVERSITY OF SHIZUOKA   (Japan)

^b UNIVERSITY OF YAMANASHI   (Japan)

Author keywords

Dietary carbohydrate; Histone H3K4 methylation; Jejunum; Sodium dependent glucose cotransporter; Sucrase isomaltase

Indexed keywords

HISTONE H3; HISTONE H3K4; HISTONE H3K9; HISTONE H4K20; NUCLEAR PROTEIN; SODIUM GLUCOSE COTRANSPORTER 1; SUCRASE ISOMALTASE; UNCLASSIFIED DRUG; FAT INTAKE; HETEROCHROMATIN-SPECIFIC NONHISTONE CHROMOSOMAL PROTEIN HP-1; HISTONE; LYSINE; NONHISTONE PROTEIN; SLC5A1 PROTEIN, RAT; STARCH;

ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; CARBOHYDRATE INTAKE; CARBOHYDRATE METABOLISM; CHROMATIN IMMUNOPRECIPITATION; CONTROLLED STUDY; DIET THERAPY; ENHANCER REGION; FOOD INTAKE; GENE; GENE INDUCTION; GENETIC TRANSCRIPTION; HIGH STARCH DIET; HISTONE METHYLATION; JEJUNUM; LOW FAT DIET; MALE; NONHUMAN; PROMOTER REGION; PROTEIN BINDING; QUANTITATIVE ANALYSIS; RAT; REAL TIME POLYMERASE CHAIN REACTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SGLT1 GENE; SI GENE; TRANSCRIPTION INITIATION; ADMINISTRATION AND DOSAGE; ANIMAL; DNA METHYLATION; FAT INTAKE; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; SPRAGUE DAWLEY RAT;

RATTUS;

ANIMALS; CHROMOSOMAL PROTEINS, NON-HISTONE; DIET, FAT-RESTRICTED; DIETARY FATS; DNA METHYLATION; ENHANCER ELEMENTS, GENETIC; GENE EXPRESSION REGULATION; HISTONES; JEJUNUM; LYSINE; MALE; PROMOTER REGIONS, GENETIC; RATS; RATS, SPRAGUE-DAWLEY; SODIUM-GLUCOSE TRANSPORTER 1; STARCH; SUCRASE-ISOMALTASE COMPLEX; TRANSCRIPTION, GENETIC;

EID: 84920913030     PISSN: 08999007     EISSN: 18731244     Source Type: Journal    
DOI: 10.1016/j.nut.2014.07.017     Document Type: Article

References (37)

1. Kim S., Sohn I., Ahn J.I., Lee K.H., Lee Y.S. Hepatic gene expression profiles in a long-term high-fat diet-induced obesity mouse model. Gene 2004, 340:99-109.
2. Miller R.S., Becker K.G., Prabhu V., Cooke D.W. Adipocyte gene expression is altered in formerly obese mice and as a function of diet composition. J Nutr 2008, 138:1033-1038.
3. Tanaka T., Kishi K., Igawa M., Takase S., Goda T. Dietary carbohydrates enhance lactase/phlorizin hydrolase gene expression at a transcription level in rat jejunum. Biochem J 1998, 331:225-230.
4. Kishi K., Tanaka T., Igawa M., Takase S., Goda T. Sucrase-isomaltase and hexose transporter gene expressions are coordinately enhanced by dietary fructose in rat jejunum. J Nutr 1999, 129:953-956.
5. Semenza G., Kessler M., Schmidt U., Venter J.C., Fraser C.M. The small-intestinal sodium-glucose cotransporter(s). Ann N Y Acad Sci 1985, 456:83-96.
6. Semenza G. Anchoring and biosynthesis of stalked brush border membrane proteins: glycosidases and peptidases of enterocytes and renal tubuli. Annu Rev Cell Biol 1986, 2:255-313.
7. Dyer J., Wood I.S., Palejwala A., Ellis A., Shirazi-Beechey S.P. Expression of monosaccharide transporters in intestine of diabetic humans. Am J Physiol Gastrointest Liver Physiol 2002, 282:G241-G248.
8. Van de Laar F.A., Lucassen P.L., Akkermans R.P., Van de Lisdonk E.H., Rutten G.E., Van Weel C. α-Glucosidase inhibitors for type 2 diabetes mellitus. Cochrane Database Syst Rev 2005, CD003639.
9. Traber P.G., Silberg D.G. Intestine-specific gene transcription. Annu Rev Physiol 1996, 58:275-297.
10. Benoit Y.D., Pare F., Francoeur C., Jean D., Tremblay E., Boudreau F., et al. Cooperation between HNF-1 α, Cdx2, and GATA-4 in initiating an enterocytic differentiation program in a normal human intestinal epithelial progenitor cell line. Am J Physiol Gastrointest Liver Physiol 2010, 298:G504-G517.
11. Inoue S., Mochizuki K., Goda T. Jejunal induction of SI and SGLT1 genes in rats by high-starch/low-fat diet is associated with histone acetylation and binding of GCN5 on the genes. J Nutr Sci Vitaminol (Tokyo) 2011, 57:162-169.
12. Jang M.K., Mochizuki K., Zhou M., Jeong H.S., Brady J.N., Ozato K. The bromodomain protein Brd4 is a positive regulatory component of P-TEFb and stimulates RNA polymerase II-dependent transcription. Mol Cell 2005, 19:523-534.
13. Sims R.J., Nishioka K., Reinberg D. Histone lysine methylation: a signature for chromatin function. Trends Genet 2003, 19:629-639.
14. Kim J.K., Samaranayake M., Pradhan S. Epigenetic mechanisms in mammals. Cell Mol Life Sci 2009, 66:596-612.
15. Barski A., Cuddapah S., Cui K., Roh T.Y., Schones D.E., Wang Z., et al. High-resolution profiling of histone methylations in the human genome. Cell 2007, 129:823-837.
16. Musri M.M., Corominola H., Casamitjana R., Gomis R., Parrizas M. Histone H3 lysine 4 dimethylation signals the transcriptional competence of the adiponectin promoter in preadipocytes. J Biol Chem 2006, 281:17180-17188.
17. Li B., Carey M., Workman J.L. The role of chromatin during transcription. Cell 2007, 128:707-719.
18. Lehnertz B., Ueda Y., Derijck A.A., Braunschweig U., Perez-Burgos L., Kubicek S., et al. Suv39 h-mediated histone H3 lysine 9 methylation directs DNA methylation to major satellite repeats at pericentric heterochromatin. Curr Biol 2003, 13:1192-1200.
19. Nishioka K., Rice J.C., Sarma K., Erdjument-Bromage H., Werner J., Wang Y., et al. PR-Set7 is a nucleosome-specific methyltransferase that modifies lysine 20 of histone H4 and is associated with silent chromatin. Mol Cell 2002, 9:1201-1213.
20. Chomczynski P., Sacchi N. Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal Biochem 1987, 162:156-159.
21. Livak K.J., Schmittgen T.D. Analysis of relative gene expression data using real-time quantitative PCR and the 2 (-Delta Delta C(T)) method. Methods 2001, 25:402-408.
22. Honma K., Mochizuki K., Goda T. Carbohydrate/fat ratio in the dietalters histone acetylation on the sucrase-isomaltase gene and its expression in mouse small intestine. Biochem Biophys Res Commun 2007, 357:1124-1129.
23. Shimada M., Mochizuki K., Goda T. Feeding rats dietary resistant starch shifts the peak of SGLT1 gene expression and histone H3 acetylation on the gene from the upper jejunum toward the ileum. J Agric Food Chem 2009, 57:8049-8055.
24. Shimada M., Mochizuki K., Goda T. Methylation of histone H3 at lysine 4 and expression of the maltase-glucoamylase gene are reduced by dietary resistant starch. J Nutr Biochem 2013, 24:606-612.
25. Yasutake H., Goda T., Takase S. Dietary regulation of sucrase-isomaltase gene expression in rat jejunum. Biochim Biophys Acta 1995, 1243:270-276.
26. Wang H., Dudley A.W., Dupont J., Reeds P.J., Hachey D.L., Dudley M.A. The duration of medium-chain triacylglycerol feeding determines brush border membrane lipid composition and hydrolase activity in newly weaned rats. J Nutr 1996, 126:1455-1462.
27. Wang H., Cao R., Xia L., Erdjument-Bromage H., Borchers C., Tempst P., et al. Purification and functional characterization of a histone H3-lysine 4-specific methyltransferase. Mol Cell 2001, 8:1207-1217.
28. Ruthenburg A.J., Allis C.D., Wysocka J. Methylation of lysine 4 on histone H3: intricacy of writing and reading a single epigenetic mark. Mol Cell 2007, 25:15-30.
29. van Ingen H., van Schaik F.M., Wienk H., Ballering J., Rehmann H., Dechesne A.C., et al. Structural insight into the recognition of the H3 K4 me3 mark by the TFIID subunit TAF3. Structure 2008, 16:1245-1256.
30. Vermeulen M., Mulder K.W., Denissov S., Pijnappel W.W., van Schaik F.M., Varier R.A., et al. Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4. Cell 2007, 131:58-69.
31. Pray-Grant M.G., Daniel J.A., Schieltz D., Yates J.R., Grant P.A. Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation. Nature 2005, 433:434-438.
32. Takizawa F., Mizutani S., Ogawa Y., Sawada N. Glucose-independent persistence of PAI-1 gene expression and H3 K4 tri-methylation in type 1 diabetic mouse endothelium: implication in metabolic memory. Biochem Biophys Res Commun 2013, 433:66-72.
33. Brasacchio D., Okabe J., Tikellis C., Balcerczyk A., George P., Baker E.K., et al. Hyperglycemia induces a dynamic cooperativity of histone methylase and demethylase enzymes associated with gene-activating epigenetic marks that coexist on the lysine tail. Diabetes 2009, 58:1229-1236.
34. Fujimoto S., Goda T., Mochizuki K. Invivo evidence of enhanced di-methylation of histone H3 K4 on upregulated genes in adipose tissue of diabetic db/db mice. Biochem Biophys Res Commun 2011, 404:223-227.
35. Fujiki R., Chikanishi T., Hashiba W., Ito H., Takada I., Roeder R.G., et al. GlcNAcylation of a histone methyltransferase in retinoic-acid-induced granulopoiesis. Nature 2009, 459:455-459.
36. Nichols B.L., Quezada-Calvillo R., Robayo-Torres C.C., Ao Z., Hamaker B.R., Butte N.F., et al. Mucosal maltase-glucoamylase plays a crucial role in starch digestion and prandial glucose homeostasis of mice. J Nutr 2009, 139:684-690.
37. Quezada-Calvillo R., Robayo-Torres C.C., Opekun A.R., Sen P., Ao Z., Hamaker B.R., et al. Contribution of mucosal maltase-glucoamylase activities to mouse small intestinal starch α-glucogenesis. J Nutr 2007, 137:1725-1733.