-
1
-
-
0035964342
-
Electrostatics of nanosystems: application to microtubules and the ribosome
-
Baker N.A., Sept D., Joseph S., Holst M.J., and McCammon J.A. Electrostatics of nanosystems: application to microtubules and the ribosome. Proc. Natl. Acad. Sci. USA 98 (2001) 10037-10041
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 10037-10041
-
-
Baker, N.A.1
Sept, D.2
Joseph, S.3
Holst, M.J.4
McCammon, J.A.5
-
2
-
-
34249026300
-
High-resolution profiling of histone methylations in the human genome
-
Barski A., Cuddapah S., Cui K.R., Roh T.Y., Schones D.E., Wang Z.B., Wei G., Chepelev I., and Zhao K.J. High-resolution profiling of histone methylations in the human genome. Cell 129 (2007) 823-837
-
(2007)
Cell
, vol.129
, pp. 823-837
-
-
Barski, A.1
Cuddapah, S.2
Cui, K.R.3
Roh, T.Y.4
Schones, D.E.5
Wang, Z.B.6
Wei, G.7
Chepelev, I.8
Zhao, K.J.9
-
3
-
-
30944452960
-
The PHD finger, a nuclear protein-interaction domain
-
Bienz M. The PHD finger, a nuclear protein-interaction domain. Trends Biochem. Sci. 31 (2006) 35-40
-
(2006)
Trends Biochem. Sci.
, vol.31
, pp. 35-40
-
-
Bienz, M.1
-
4
-
-
33845666681
-
Structural basis for the methylation state-specific recognition of histone H4-K20 by 53BP1 and Crb2 in DNA repair
-
Botuyan M.V., Lee J., Ward I.M., Kim J.E., Thompson J.R., Chen J.J., and Mer G. Structural basis for the methylation state-specific recognition of histone H4-K20 by 53BP1 and Crb2 in DNA repair. Cell 127 (2006) 1361-1373
-
(2006)
Cell
, vol.127
, pp. 1361-1373
-
-
Botuyan, M.V.1
Lee, J.2
Ward, I.M.3
Kim, J.E.4
Thompson, J.R.5
Chen, J.J.6
Mer, G.7
-
5
-
-
3543012707
-
Crystallography & NMR system: a new software suite for macromolecular structure determination
-
Brunger A.T., Adams P.D., Clore G.M., DeLano W.L., Gros P., Grosse-Kunstleve R.W., Jiang J.S., Kuszewski J., Nilges M., Pannu N.S., et al. Crystallography & NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr. D Biol. Crystallogr. 54 (1998) 905-921
-
(1998)
Acta Crystallogr. D Biol. Crystallogr.
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
-
6
-
-
0033003335
-
Protein backbone angle restraints from searching a database for chemical shift and sequence homology
-
Cornilescu G., Delaglio F., and Bax A. Protein backbone angle restraints from searching a database for chemical shift and sequence homology. J. Biomol. NMR 13 (1999) 289-302
-
(1999)
J. Biomol. NMR
, vol.13
, pp. 289-302
-
-
Cornilescu, G.1
Delaglio, F.2
Bax, A.3
-
7
-
-
36748998784
-
HADDOCK versus HADDOCK: new features and performance of HADDOCK2.0 on the CAPRI targets
-
de Vries S.J., van Dijk A.D., Krzeminski M., van Dijk M., Thureau A., Hsu V., Wassenaar T., and Bonvin A.M. HADDOCK versus HADDOCK: new features and performance of HADDOCK2.0 on the CAPRI targets. Proteins 69 (2007) 726-733
-
(2007)
Proteins
, vol.69
, pp. 726-733
-
-
de Vries, S.J.1
van Dijk, A.D.2
Krzeminski, M.3
van Dijk, M.4
Thureau, A.5
Hsu, V.6
Wassenaar, T.7
Bonvin, A.M.8
-
8
-
-
0029400480
-
NMRPipe: a multidimensional spectral processing system based on UNIX pipes
-
Delaglio F., Grzesiek S., Vuister G.W., Zhu G., Pfeifer J., and Bax A. NMRPipe: a multidimensional spectral processing system based on UNIX pipes. J. Biomol. NMR 6 (1995) 277-293
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.W.3
Zhu, G.4
Pfeifer, J.5
Bax, A.6
-
9
-
-
48149099693
-
-
DeLano Scientific LLC (2008). PyMOL (http://www.pymol.org).
-
DeLano Scientific LLC (2008). PyMOL (http://www.pymol.org).
-
-
-
-
10
-
-
0037442962
-
HADDOCK: a protein-protein docking approach based on biochemical or biophysical information
-
Dominguez C., Boelens R., and Bonvin A.M. HADDOCK: a protein-protein docking approach based on biochemical or biophysical information. J. Am. Chem. Soc. 125 (2003) 1731-1737
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 1731-1737
-
-
Dominguez, C.1
Boelens, R.2
Bonvin, A.M.3
-
11
-
-
0030043489
-
Cation-π interactions in chemistry and biology: a new view of benzene, Phe, Tyr, and Trp
-
Dougherty D.A. Cation-π interactions in chemistry and biology: a new view of benzene, Phe, Tyr, and Trp. Science 271 (1996) 163-168
-
(1996)
Science
, vol.271
, pp. 163-168
-
-
Dougherty, D.A.1
-
12
-
-
0035281284
-
Quantum/classical mechanical comparison of cation-π interactions between tetramethylammonium and benzene
-
Felder C., Jiang H.L., Zhu W.L., Chen K.X., Silman I., Botti S.A., and Sussman J.L. Quantum/classical mechanical comparison of cation-π interactions between tetramethylammonium and benzene. J. Phys. Chem. A 105 (2001) 1326-1333
-
(2001)
J. Phys. Chem. A
, vol.105
, pp. 1326-1333
-
-
Felder, C.1
Jiang, H.L.2
Zhu, W.L.3
Chen, K.X.4
Silman, I.5
Botti, S.A.6
Sussman, J.L.7
-
13
-
-
0141929385
-
Binary switches and modification cassettes in histone biology and beyond
-
Fischle W., Wang Y.M., and Allis C.D. Binary switches and modification cassettes in histone biology and beyond. Nature 425 (2003) 475-479
-
(2003)
Nature
, vol.425
, pp. 475-479
-
-
Fischle, W.1
Wang, Y.M.2
Allis, C.D.3
-
14
-
-
29244460109
-
Double chromodomains cooperate to recognize the methylated histone H3 tail
-
Flanagan J.F., Mi L.Z., Chruszcz M., Cymborowski M., Clines K.L., Kim Y.C., Minor W., Rastinejad F., and Khorasanizadeh S. Double chromodomains cooperate to recognize the methylated histone H3 tail. Nature 438 (2005) 1181-1185
-
(2005)
Nature
, vol.438
, pp. 1181-1185
-
-
Flanagan, J.F.1
Mi, L.Z.2
Chruszcz, M.3
Cymborowski, M.4
Clines, K.L.5
Kim, Y.C.6
Minor, W.7
Rastinejad, F.8
Khorasanizadeh, S.9
-
16
-
-
33745737494
-
Myc-binding-site recognition in the human genome is determined by chromatin context
-
Guccione E., Martinato F., Finocchiaro G., Luzi L., Tizzoni L., Dall' Olio V., Zardo G., Nervi C., Bernard L., and Amati B. Myc-binding-site recognition in the human genome is determined by chromatin context. Nat. Cell Biol. 8 (2006) 764-770
-
(2006)
Nat. Cell Biol.
, vol.8
, pp. 764-770
-
-
Guccione, E.1
Martinato, F.2
Finocchiaro, G.3
Luzi, L.4
Tizzoni, L.5
Dall' Olio, V.6
Zardo, G.7
Nervi, C.8
Bernard, L.9
Amati, B.10
-
17
-
-
35349030188
-
Methylation of histone H3R2 by PRMT6 and H3K4 by an MLL complex are mutually exclusive
-
Guccione E., Bassi C., Casadio F., Martinato F., Cesaroni M., Schuchlautz H., Luscher B., and Amati B. Methylation of histone H3R2 by PRMT6 and H3K4 by an MLL complex are mutually exclusive. Nature 449 (2007) 933-937
-
(2007)
Nature
, vol.449
, pp. 933-937
-
-
Guccione, E.1
Bassi, C.2
Casadio, F.3
Martinato, F.4
Cesaroni, M.5
Schuchlautz, H.6
Luscher, B.7
Amati, B.8
-
18
-
-
34447098370
-
A chromatin landmark and transcription initiation at most promoters in human cells
-
Guenther M.G., Levine S.S., Boyer L.A., Jaenisch R., and Young R.A. A chromatin landmark and transcription initiation at most promoters in human cells. Cell 130 (2007) 77-88
-
(2007)
Cell
, vol.130
, pp. 77-88
-
-
Guenther, M.G.1
Levine, S.S.2
Boyer, L.A.3
Jaenisch, R.4
Young, R.A.5
-
19
-
-
0031576336
-
Torsion angle dynamics for NMR structure calculation with the new program DYANA
-
Guntert P., Mumenthaler C., and Wuthrich K. Torsion angle dynamics for NMR structure calculation with the new program DYANA. J. Mol. Biol. 273 (1997) 283-298
-
(1997)
J. Mol. Biol.
, vol.273
, pp. 283-298
-
-
Guntert, P.1
Mumenthaler, C.2
Wuthrich, K.3
-
20
-
-
33847334699
-
Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
-
Heintzman N.D., Stuart R.K., Hon G., Fu Y., Ching C.W., Hawkins R.D., Barrera L.O., Van Calcar S., Qu C., Ching K.A., et al. Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome. Nat. Genet. 39 (2007) 311-318
-
(2007)
Nat. Genet.
, vol.39
, pp. 311-318
-
-
Heintzman, N.D.1
Stuart, R.K.2
Hon, G.3
Fu, Y.4
Ching, C.W.5
Hawkins, R.D.6
Barrera, L.O.7
Van Calcar, S.8
Qu, C.9
Ching, K.A.10
-
21
-
-
34249757710
-
Determination of the rotational-dynamics and pH-dependence of the hydrogen-exchange rates of the arginine guanidino group using Nmr-spectroscopy
-
Henry G.D., and Sykes B.D. Determination of the rotational-dynamics and pH-dependence of the hydrogen-exchange rates of the arginine guanidino group using Nmr-spectroscopy. J. Biomol. NMR 6 (1995) 59-66
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 59-66
-
-
Henry, G.D.1
Sykes, B.D.2
-
22
-
-
0036308102
-
Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA
-
Herrmann T., Guntert P., and Wuthrich K. Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA. J. Mol. Biol. 319 (2002) 209-227
-
(2002)
J. Mol. Biol.
, vol.319
, pp. 209-227
-
-
Herrmann, T.1
Guntert, P.2
Wuthrich, K.3
-
24
-
-
33646438365
-
Recognition of histone H3 lysine-4 methylation by the double tudor domain of JMJD2A
-
Huang Y., Fang J., Bedford M.T., Zhang Y., and Xu R.M. Recognition of histone H3 lysine-4 methylation by the double tudor domain of JMJD2A. Science 312 (2006) 748-751
-
(2006)
Science
, vol.312
, pp. 748-751
-
-
Huang, Y.1
Fang, J.2
Bedford, M.T.3
Zhang, Y.4
Xu, R.M.5
-
25
-
-
34547161846
-
Effects of chain length and N-methylation on a cation-π interaction in a β-hairpin peptide
-
Hughes R.M., Benshoff M.L., and Waters M.L. Effects of chain length and N-methylation on a cation-π interaction in a β-hairpin peptide. Chemistry (Easton) 13 (2007) 5753-5764
-
(2007)
Chemistry (Easton)
, vol.13
, pp. 5753-5764
-
-
Hughes, R.M.1
Benshoff, M.L.2
Waters, M.L.3
-
26
-
-
34547427285
-
Recognition of trimethyllysine by a chromodomain is not driven by the hydrophobic effect
-
Hughes R.M., Wiggins K.R., Khorasanizadeh S., and Waters M.L. Recognition of trimethyllysine by a chromodomain is not driven by the hydrophobic effect. Proc. Natl. Acad. Sci. USA 104 (2007) 11184-11188
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 11184-11188
-
-
Hughes, R.M.1
Wiggins, K.R.2
Khorasanizadeh, S.3
Waters, M.L.4
-
27
-
-
37249026306
-
PRMT6-mediated methylation of R2 in histone H3 antagonizes H3 K4 trimethylation
-
Hyllus D., Stein C., Schnabel K., Schiltz E., Imhof A., Dou Y., Hsieh J., and Bauer U.M. PRMT6-mediated methylation of R2 in histone H3 antagonizes H3 K4 trimethylation. Genes Dev. 21 (2007) 3369-3380
-
(2007)
Genes Dev.
, vol.21
, pp. 3369-3380
-
-
Hyllus, D.1
Stein, C.2
Schnabel, K.3
Schiltz, E.4
Imhof, A.5
Dou, Y.6
Hsieh, J.7
Bauer, U.M.8
-
28
-
-
0037086355
-
Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail
-
Jacobs S.A., and Khorasanizadeh S. Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail. Science 295 (2002) 2080-2083
-
(2002)
Science
, vol.295
, pp. 2080-2083
-
-
Jacobs, S.A.1
Khorasanizadeh, S.2
-
29
-
-
4644234334
-
Mars-robust automatic backbone assignment of proteins
-
Jung Y.S., and Zweckstetter M. Mars-robust automatic backbone assignment of proteins. J. Biomol. NMR 30 (2004) 11-23
-
(2004)
J. Biomol. NMR
, vol.30
, pp. 11-23
-
-
Jung, Y.S.1
Zweckstetter, M.2
-
30
-
-
35348986412
-
Arginine methylation at histone H3R2 controls deposition of H3K4 trimethylation
-
Kirmizis A., Santos-Rosa H., Penkett C.J., Singer M.A., Vermeulen M., Mann M., Bahler J., Green R.D., and Kouzarides T. Arginine methylation at histone H3R2 controls deposition of H3K4 trimethylation. Nature 449 (2007) 928-932
-
(2007)
Nature
, vol.449
, pp. 928-932
-
-
Kirmizis, A.1
Santos-Rosa, H.2
Penkett, C.J.3
Singer, M.A.4
Vermeulen, M.5
Mann, M.6
Bahler, J.7
Green, R.D.8
Kouzarides, T.9
-
31
-
-
33847076849
-
Chromatin modifications and their function
-
Kouzarides T. Chromatin modifications and their function. Cell 128 (2007) 693-705
-
(2007)
Cell
, vol.128
, pp. 693-705
-
-
Kouzarides, T.1
-
32
-
-
34547793043
-
Recognition of unmethylated histone H3 lysine 4 links BHC80 to LSD1-mediated gene repression
-
Lan F., Collins R.E., De Cegli R., Alpatov R., Horton J.R., Shi X.B., Gozani O., Cheng X.D., and Shi Y. Recognition of unmethylated histone H3 lysine 4 links BHC80 to LSD1-mediated gene repression. Nature 448 (2007) 718-722
-
(2007)
Nature
, vol.448
, pp. 718-722
-
-
Lan, F.1
Collins, R.E.2
De Cegli, R.3
Alpatov, R.4
Horton, J.R.5
Shi, X.B.6
Gozani, O.7
Cheng, X.D.8
Shi, Y.9
-
33
-
-
0030339738
-
AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR
-
Laskowski R.A., Rullmannn J.A., MacArthur M.W., Kaptein R., and Thornton J.M. AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR. J. Biomol. NMR 8 (1996) 477-486
-
(1996)
J. Biomol. NMR
, vol.8
, pp. 477-486
-
-
Laskowski, R.A.1
Rullmannn, J.A.2
MacArthur, M.W.3
Kaptein, R.4
Thornton, J.M.5
-
34
-
-
37849015924
-
Distinct binding modes specify the recognition of methylated histones H3K4 and H4K20 by JMJD2A-tudor
-
Lee J., Thompson J.R., Botuyan M.V., and Mer G. Distinct binding modes specify the recognition of methylated histones H3K4 and H4K20 by JMJD2A-tudor. Nat. Struct. Mol. Biol. 15 (2008) 109-111
-
(2008)
Nat. Struct. Mol. Biol.
, vol.15
, pp. 109-111
-
-
Lee, J.1
Thompson, J.R.2
Botuyan, M.V.3
Mer, G.4
-
35
-
-
36249026356
-
Structural basis for lower lysine methylation state-specific readout by MBT repeats of L3MBTL1 and an engineered PHD finger
-
Li H., Fischle W., Wang W., Duncan E.M., Liang L., Murakami-Ishibe S., Allis C.D., and Patel D.J. Structural basis for lower lysine methylation state-specific readout by MBT repeats of L3MBTL1 and an engineered PHD finger. Mol. Cell 28 (2007) 677-691
-
(2007)
Mol. Cell
, vol.28
, pp. 677-691
-
-
Li, H.1
Fischle, W.2
Wang, W.3
Duncan, E.M.4
Liang, L.5
Murakami-Ishibe, S.6
Allis, C.D.7
Patel, D.J.8
-
36
-
-
33745809637
-
Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF
-
Li H.T., Ilin S., Wang W.K., Duncan E.M., Wysocka J., Allis C.D., and Patel D.J. Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF. Nature 442 (2006) 91-95
-
(2006)
Nature
, vol.442
, pp. 91-95
-
-
Li, H.T.1
Ilin, S.2
Wang, W.K.3
Duncan, E.M.4
Wysocka, J.5
Allis, C.D.6
Patel, D.J.7
-
37
-
-
37249041657
-
RAG2 PHD finger couples histone H3 lysine 4 trimethylation with V(D)J recombination
-
Matthews A.G., Kuo A.J., Ramon-Maiques S., Han S., Champagne K.S., Ivanov D., Gallardo M., Carney D., Cheung P., Ciccone D.N., et al. RAG2 PHD finger couples histone H3 lysine 4 trimethylation with V(D)J recombination. Nature 450 (2007) 1106-1110
-
(2007)
Nature
, vol.450
, pp. 1106-1110
-
-
Matthews, A.G.1
Kuo, A.J.2
Ramon-Maiques, S.3
Han, S.4
Champagne, K.S.5
Ivanov, D.6
Gallardo, M.7
Carney, D.8
Cheung, P.9
Ciccone, D.N.10
-
38
-
-
0033544354
-
Cation-π interactions in proteins: can simple models provide an accurate description?
-
Minoux H., and Chipot C. Cation-π interactions in proteins: can simple models provide an accurate description?. J. Am. Chem. Soc. 121 (1999) 10366-10372
-
(1999)
J. Am. Chem. Soc.
, vol.121
, pp. 10366-10372
-
-
Minoux, H.1
Chipot, C.2
-
39
-
-
21044449889
-
RECOORD: a recalculated coordinate database of 500+ proteins from the PDB using restraints from the BioMagResBank
-
Nederveen A.J., Doreleijers J.F., Vranken W., Miller Z., Spronk C.A., Nabuurs S.B., Guntert P., Livny M., Markley J.L., Nilges M., et al. RECOORD: a recalculated coordinate database of 500+ proteins from the PDB using restraints from the BioMagResBank. Proteins 59 (2005) 662-672
-
(2005)
Proteins
, vol.59
, pp. 662-672
-
-
Nederveen, A.J.1
Doreleijers, J.F.2
Vranken, W.3
Miller, Z.4
Spronk, C.A.5
Nabuurs, S.B.6
Guntert, P.7
Livny, M.8
Markley, J.L.9
Nilges, M.10
-
40
-
-
34547725157
-
DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA
-
Ooi S.K., Qiu C., Bernstein E., Li K.Q., Jia D., Yang Z., Erdjument-Bromage H., Tempst P., Lin S.P., Allis C.D., et al. DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA. Nature 448 (2007) 714-717
-
(2007)
Nature
, vol.448
, pp. 714-717
-
-
Ooi, S.K.1
Qiu, C.2
Bernstein, E.3
Li, K.Q.4
Jia, D.5
Yang, Z.6
Erdjument-Bromage, H.7
Tempst, P.8
Lin, S.P.9
Allis, C.D.10
-
41
-
-
0034671463
-
Structure of the PHD zinc finger from human Williams-Beuren syndrome transcription factor
-
Pascual J., Martinez-Yamout M., Dyson H.J., and Wright P.E. Structure of the PHD zinc finger from human Williams-Beuren syndrome transcription factor. J. Mol. Biol. 304 (2000) 723-729
-
(2000)
J. Mol. Biol.
, vol.304
, pp. 723-729
-
-
Pascual, J.1
Martinez-Yamout, M.2
Dyson, H.J.3
Wright, P.E.4
-
42
-
-
35148851120
-
Binding of organic cations to gramicidin A channel studied with AutoDock and molecular dynamics simulations
-
Patra S.M., Bastug T., and Kuyucak S. Binding of organic cations to gramicidin A channel studied with AutoDock and molecular dynamics simulations. J. Phys. Chem. B 111 (2007) 11303-11311
-
(2007)
J. Phys. Chem. B
, vol.111
, pp. 11303-11311
-
-
Patra, S.M.1
Bastug, T.2
Kuyucak, S.3
-
43
-
-
33745818717
-
Molecular mechanism of histone H3K4me3 recognition by plant homeodomain of ING2
-
Pena P.V., Davrazou F., Shi X.B., Walter K.L., Verkhusha V.V., Gozani O., Zhao R., and Kutateladze T.G. Molecular mechanism of histone H3K4me3 recognition by plant homeodomain of ING2. Nature 442 (2006) 100-103
-
(2006)
Nature
, vol.442
, pp. 100-103
-
-
Pena, P.V.1
Davrazou, F.2
Shi, X.B.3
Walter, K.L.4
Verkhusha, V.V.5
Gozani, O.6
Zhao, R.7
Kutateladze, T.G.8
-
44
-
-
37649026007
-
The plant homeodomain finger of RAG2 recognizes histone H3 methylated at both lysine-4 and arginine-2
-
Ramon-Maiques S., Kuo A.J., Carney D., Matthews A.G., Oettinger M.A., Gozani O., and Yang W. The plant homeodomain finger of RAG2 recognizes histone H3 methylated at both lysine-4 and arginine-2. Proc. Natl. Acad. Sci. USA 104 (2007) 18993-18998
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 18993-18998
-
-
Ramon-Maiques, S.1
Kuo, A.J.2
Carney, D.3
Matthews, A.G.4
Oettinger, M.A.5
Gozani, O.6
Yang, W.7
-
45
-
-
33846019277
-
Methylation of lysine 4 on histone H3: intricacy of writing and reading a single epigenetic mark
-
Ruthenburg A.J., Allis C.D., and Wysocka J. Methylation of lysine 4 on histone H3: intricacy of writing and reading a single epigenetic mark. Mol. Cell 25 (2007) 15-30
-
(2007)
Mol. Cell
, vol.25
, pp. 15-30
-
-
Ruthenburg, A.J.1
Allis, C.D.2
Wysocka, J.3
-
46
-
-
0037179716
-
Active genes are tri-methylated at K4 of histone H3
-
Santos-Rosa H., Schneider R., Bannister A.J., Sherriff J., Bernstein B.E., Emre N.C.T., Schreiber S.L., Mellor J., and Kouzarides T. Active genes are tri-methylated at K4 of histone H3. Nature 419 (2002) 407-411
-
(2002)
Nature
, vol.419
, pp. 407-411
-
-
Santos-Rosa, H.1
Schneider, R.2
Bannister, A.J.3
Sherriff, J.4
Bernstein, B.E.5
Emre, N.C.T.6
Schreiber, S.L.7
Mellor, J.8
Kouzarides, T.9
-
47
-
-
33745868054
-
ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression
-
Shi X., Hong T., Walter K.L., Ewalt M., Michishita E., Hung T., Carney D., Pena P., Lan F., Kaadige M.R., et al. ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression. Nature 442 (2006) 96-99
-
(2006)
Nature
, vol.442
, pp. 96-99
-
-
Shi, X.1
Hong, T.2
Walter, K.L.3
Ewalt, M.4
Michishita, E.5
Hung, T.6
Carney, D.7
Pena, P.8
Lan, F.9
Kaadige, M.R.10
-
48
-
-
84962352816
-
2+ interactions: thiol vs. thiolate coordination
-
2+ interactions: thiol vs. thiolate coordination. Proteins 49 (2002) 37-48
-
(2002)
Proteins
, vol.49
, pp. 37-48
-
-
Simonson, T.1
Calimet, N.2
-
49
-
-
33751116960
-
Histone H3 Lys 4 methylation: caught in a bind?
-
Sims R.J., and Reinberg D. Histone H3 Lys 4 methylation: caught in a bind?. Genes Dev. 20 (2006) 2779-2786
-
(2006)
Genes Dev.
, vol.20
, pp. 2779-2786
-
-
Sims, R.J.1
Reinberg, D.2
-
50
-
-
29644433964
-
Human but not yeast CHD1 binds directly and selectively to histone H3 methylated at lysine 4 via its tandem chromodomains
-
Sims R.J., Chen C.F., Santos-Rosa H., Kouzarides T., Patel S.S., and Reinberg D. Human but not yeast CHD1 binds directly and selectively to histone H3 methylated at lysine 4 via its tandem chromodomains. J. Biol. Chem. 280 (2005) 41789-41792
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 41789-41792
-
-
Sims, R.J.1
Chen, C.F.2
Santos-Rosa, H.3
Kouzarides, T.4
Patel, S.S.5
Reinberg, D.6
-
51
-
-
0034610814
-
The language of covalent histone modifications
-
Strahl B.D., and Allis C.D. The language of covalent histone modifications. Nature 403 (2000) 41-45
-
(2000)
Nature
, vol.403
, pp. 41-45
-
-
Strahl, B.D.1
Allis, C.D.2
-
52
-
-
33751527233
-
Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs
-
Taverna S.D., Ilin S., Rogers R.S., Tanny J.C., Lavender H., Li H.T., Baker L., Boyle J., Blair L.P., Chait B.T., et al. Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs. Mol. Cell 24 (2006) 785-796
-
(2006)
Mol. Cell
, vol.24
, pp. 785-796
-
-
Taverna, S.D.1
Ilin, S.2
Rogers, R.S.3
Tanny, J.C.4
Lavender, H.5
Li, H.T.6
Baker, L.7
Boyle, J.8
Blair, L.P.9
Chait, B.T.10
-
53
-
-
38549138986
-
BioMagResBank
-
Ulrich E.L., Akutsu H., Doreleijers J.F., Harano Y., Ioannidis Y.E., Lin J., Livny M., Mading S., Maziuk D., Miller Z., et al. BioMagResBank. Nucleic Acids Res. 36 (2008) D402-D408
-
(2008)
Nucleic Acids Res.
, vol.36
-
-
Ulrich, E.L.1
Akutsu, H.2
Doreleijers, J.F.3
Harano, Y.4
Ioannidis, Y.E.5
Lin, J.6
Livny, M.7
Mading, S.8
Maziuk, D.9
Miller, Z.10
-
54
-
-
34848911602
-
Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4
-
Vermeulen M., Mulder K.W., Denissov S., Pijnappel W.W., van Schaik F.M., Varier R.A., Baltissen M.P., Stunnenberg H.G., Mann M., and Timmers H.T.M. Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4. Cell 131 (2007) 58-69
-
(2007)
Cell
, vol.131
, pp. 58-69
-
-
Vermeulen, M.1
Mulder, K.W.2
Denissov, S.3
Pijnappel, W.W.4
van Schaik, F.M.5
Varier, R.A.6
Baltissen, M.P.7
Stunnenberg, H.G.8
Mann, M.9
Timmers, H.T.M.10
-
55
-
-
0028393784
-
The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data
-
Wishart D.S., and Sykes B.D. The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data. J. Biomol. NMR 4 (1994) 171-180
-
(1994)
J. Biomol. NMR
, vol.4
, pp. 171-180
-
-
Wishart, D.S.1
Sykes, B.D.2
-
57
-
-
33745839365
-
A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling
-
Wysocka J., Swigut T., Xiao H., Milne T.A., Kwon S.Y., Landry J., Kauer M., Tackett A.J., Chait B.T., Badenhorst P., et al. A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling. Nature 442 (2006) 86-90
-
(2006)
Nature
, vol.442
, pp. 86-90
-
-
Wysocka, J.1
Swigut, T.2
Xiao, H.3
Milne, T.A.4
Kwon, S.Y.5
Landry, J.6
Kauer, M.7
Tackett, A.J.8
Chait, B.T.9
Badenhorst, P.10
-
58
-
-
0030808350
-
Methods for measurement of intermolecular NOEs by multinuclear NMR spectroscopy: application to a bacteriophage lambda N-peptide/boxB RNA complex
-
Zwahlen C., Legault P., Vincent S.J.F., Greenblatt J., Konrat R., and Kay L.E. Methods for measurement of intermolecular NOEs by multinuclear NMR spectroscopy: application to a bacteriophage lambda N-peptide/boxB RNA complex. J. Am. Chem. Soc. 119 (1997) 6711-6721
-
(1997)
J. Am. Chem. Soc.
, vol.119
, pp. 6711-6721
-
-
Zwahlen, C.1
Legault, P.2
Vincent, S.J.F.3
Greenblatt, J.4
Konrat, R.5
Kay, L.E.6
|